The largest database of trusted experimental protocols

7 protocols using 5 aminoimidazole 4 carboxamide 1 β d ribofuranoside aicar

1

Sunitinib and Mitochondrial Dynamics Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Stock solutions (10 mmol/l) of Sunitinib malate (S-8803, LC Laboratories, Woburn, Massachusetts) were prepared in dimethyl sulfoxide (DMSO) (D12345, Life Technologies, Thermo Fisher Scientific) and were remade every 6 months to ensure biological activity. Stock solutions were diluted at least 1:1000 in media for experiments to avoid any DMSO-induced toxicity. Samples treated with DMSO at the same volume per volume percentage were used as control samples (vehicle). Microtissues treated with 1 μmol/l Staurosporine (Sigma Aldrich, St. Louis, Missouri) were used as a positive control for apoptosis (27) (link). Carbonyl cyanide m-chlorophenyl hydrazone (CCCP) (Sigma Aldrich) was used a positive control for mitochondria membrane potential disruption (28) (link) at a concentration of 50 μmol/l and was incubated with cells for 30 min at 37⁰C. In a subset of experiments, 5-aminoimidazole-4-carboxamide 1-β-D-ribofuranoside (AICAR) (Sigma Aldrich) was administered concurrently with sunitinib at a concentration of 1 mmol/l.
+ Open protocol
+ Expand
2

MTT Assay for Cell Viability

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell viability was determined using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay as previously described.22 (link) After 24 or 48 hours incubation with PEE or 5-aminoimidazole-4-carboxamide 1-β-D-ribofuranoside (AICAR; Sigma-Aldrich, St Louis, MO, USA) at serial concentrations, culture medium was aspirated, and the cells were washed with PBS followed by incubation with MTT (0.5 mg/mL) at 37°C for 4 hours. After incubation, the supernatant was removed, and the cells were given with isopropanol to dissolve formazan. Concentration of formazan was determined by measuring the absorbance at 570 nm using SpectraMAX 360 pc microplate reader (Molecular Devices, Sunnyvale, CA, USA).
+ Open protocol
+ Expand
3

Biochemical Reagents and Antibodies

Check if the same lab product or an alternative is used in the 5 most similar protocols
The biochemical reagent 5-Aminoimidazole-4-carboxamide-1-β-D-ribofuranoside (AICAR) and Compound C (C-C) was purchased from Sigma Chemical (St Louis, MO). The following antibodies were used: anti-p-AMPKα (T172), p-mTOR (S2448), p-p70S6K(T389) and p-S6(S235/S236) (Cell Signaling Technology, Beverly, MA); ATIC (10726–1-AP), AMPKα (10929–2-AP), mTOR (20657–1-AP), S6 K1 (14485–1-AP), S6 (14823–1-AP), Caspase 3 (66470–1-Ig) and GAPDH (60004–1-Ig) (Proteintech Group, Chicago, IL).
+ Open protocol
+ Expand
4

Immunolabeling of Ion Channels

Check if the same lab product or an alternative is used in the 5 most similar protocols
The antibodies used were: mouse monoclonal anti-Kv1.4 (1:50, clone K13/31, UC Davis/NIH NeuroMab Facility), goat polyclonal anti-Kv7.1 (1:100), Alexa Fluor®488-conjugated donkey anti-mouse IgG (1:200) and Alexa Fluor®555-conjugated donkey anti-goat IgG (1:500). Alexa Flour®647 phalloidin (1:200) and 4′,6-diamidino-2-phenylindole (DAPI) was used to stain actin filaments and nuclei, respectively. All fluorescent antibodies and probes were purchased from Thermo Fischer Scientific.
The activators and inhibitors used in this study were as follows: 5-aminoimidazole-4-carboxamide-1-β-D-ribofuranoside (AICAR, Sigma-Aldrich, 0.5 mM), 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranosyl-5′-monophosphate (ZMP, Sigma-Aldrich), 2-O-Tetradecanoylphorbol 13-acetate (PMA, Sigma-Aldrich, 100 nM), 52-(4-Morpholinyl)-8-phenyl-1(4H)-benzopyran-4-one hydrochloride (LY294002, Sigma-Aldrich, 10 µM), 2-Cyclopentyl-4-(5-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl-benzoic acid (GSK650394, Tocris Bioscience, 1 µM).
+ Open protocol
+ Expand
5

AMPK Activation and Inhibition Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
5-aminoimidazole-4-carboxamide-1-β-D-ribofuranoside (AICAR, an AMPK activator) and compound C (an AMPK inhibitor) were purchased from Sigma-Aldrich (St. Louis, MO, USA).
+ Open protocol
+ Expand
6

Comprehensive Pharmacological Screening Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cucurbitacin B (CuB, 100 μM), glucose (10%), denatonium benzoate (10 mM), 2-APB (10 μM), U73122 (10 μM), U73343 (10 μM), rolipram (50 μM), STO-690 (100 μM), Dorsomorphin (50 μM), forskolin (5 μM), and AICAR (5-Aminoimidazole-4-carboxamide-1-β-D-ribofuranoside, 1–5 mM) were purchased from Sigma-Aldrich (Sigma-Aldrich, MO, United States). Gallein (10 μM) was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, United States). Lactisole (10 μM) was purchased from Endeavour Speciality Chemicals (Daventry, United Kingdom). Metformin, Diabex tab was purchased from Daewoong Pharmaceutical Co., Ltd. (Gyeonggi-do, South Korea). PBS was purchased from Corning (NY, United States) Bovine serum albumin (BSA) was purchased from RMBIO (MT, United States). Exendin 9-39 was purchased from Abcam (Cambridge, United Kingdom).
+ Open protocol
+ Expand
7

Synthesis and Pharmacological Evaluation of mPGES-1 Inhibitor AF3485

Check if the same lab product or an alternative is used in the 5 most similar protocols
The mPGES-1 inhibitor, AF3485 N-[9-(2-hydroxyethyl)-9H-carbazol-3yl]-2-(trifluoromethyl) benzamide (MW 398.38), was synthesized in Angelini S.p.A. (Rome, Italy). Lipopolysaccharide (LPS, derived from Escherichia Coli 026:B6), the irreversible peroxisome proliferator-activated receptor (PPAR)γ antagonist, GW9662, the complete Freund's adjuvant (CFA), the proteasome inhibitor MG132 (carbobenzoxy-Leu-Leu-leucinal), the cell-permeable AMP-activated protein kinase (AMPK) inhibitor, Compound C [ComC; {6-[4-(2-piperidin-1-ylethoxy) phenyl]-3-pyridin-4-ylpyrazolo [1,5-a] pyrimidine}], and cell-permeable activator of AMPK, AICAR (5-aminoimidazole-4-carboxamide-1-β-D-ribofuranoside) were purchased from Sigma-Aldrich (St. Louis, MO, USA). The selective COX-2 inhibitors, celecoxib was purchased from CCS.Chem.Co., Ltd (Zhejiang, China) while L-745337, was kindly provided by Merck Frosst Canada. The compounds were used in different experimental conditions, as described in detail below.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!