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350 protocols using dulbecco s modified eagle s medium

1

Transfection of Cell Lines for Molecular Studies

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The cell lines HEK293T and VCaP were purchased from ATCC (Manassas, VA). BPH-1 cells were kindly provided by Dr. Donald Tindall (Mayo Clinic). HEK293T cells were cultured in Dulbecco's modified Eagle's medium (Corning cellgro) supplemented with 10% FBS (Thermo Fisher Scientific, Cat# 10437028). VCaP cells were cultured in Dulbecco's modified Eagle's medium (Corning cellgro) supplemented with 13% FBS (Thermo Fisher Scientific, Cat# 10437028). BPH-1 cells were cultured in RPMI 1640 medium (Corning cellgro) supplemented with 10% FBS (Thermo Fisher Scientific, Cat# 10437028). Transfections were performed using Lipofectatmine2000 (Thermo Fisher Scientific) or by electroporation using an Electro Square Porator ECM 830 (BTX) with Mirus Ingenio solution, following manufacturer's instructions. Approximately 75–90% transfection efficiencies were routinely achieved, verified by expression of GFP co-transfected with the plasmid(s) of interest.
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2

Cell Line Maintenance with Mycoplasma Screening

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HEK293T (ATCC CRL-3216) and DLD1 cells (ATCC CCL-221) were purchased from ATCC and maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) fetal bovine serum (FBS), at 37° with 5% CO2. NIH/3T3 (ATCC CRL-1658) were maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) bovine calf serum. Cells were regularly tested for mycoplasma using the MycoAlert mycoplasma detection kit (Lonza, #LT07–418) and discarded if found positive.
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3

Cell Line Maintenance Protocols

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HEK293T (ATCC CRL-3216) and DLD1 (ATCC CCL-221) cells were maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) fetal bovine serum (FBS), at 37° with 5% CO2. PC9 (ATCC 32727) and NCI-H23 (ATCC: CRL-5800) were maintained in RMPI-1640 medium supplemented with 10% (v/v) fetal bovine serum, at 37° with 5% CO2. NIH/3T3 (ATCC CRL-1658) were maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) bovine calf serum (CALF). Mouse KH2 embryonic stem cells were maintained on irradiated MEF feeders in M15 media containing LIF, as previously outlined 28 .
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4

Culturing Prostate Cancer Cell Lines

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The prostate cancer cell lines LnCap, PC3 and DU145 were purchased from the Wuhan University Strain Preservation Center (Wuhan, China) and cultured in Ham's F12 medium or Dulbecco's modified Eagle's medium (Corning, US). These cells were supplemented with exosome-free serum Ham's F12 medium or Dulbecco's modified Eagle's medium supplemented with exosome-free serum (Corning, US), 2 ng/mL basic fibroblast growth factor (Corning, US), 2 mM glutamine (Yongjin Biotech, Guangzhou, China), and 10 units/ml penicillin/streptomycin. Cultures were maintained at 37 °C in an atmosphere containing 5% CO2.
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5

Isolation and Culture of Autologous Osteosarcoma Cells

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In order to generate autologous tumor cells for immunological analyses, the amputated limb was collected from surgery and small tumor pieces were removed and diced into 1 mm cubes. The remaining tumor mass was submitted for histopathological confirmation of the diagnosis of OSA. The tumor cubes were cultured in complete DMEM (Dulbecco's Modified Eagle's Medium, Corning) with penicillin (300 IU/ml, Corning), streptomycin (300 ug/ml, Corning), amphotericin B (1.5ug/ml, Corning), and 20% FBS (fetal bovine serum, Sigma) at 37 °C in 6 well plates as tumor explants. The media was changed weekly until cells were 80–90% confluent. Adherent cells were passaged two to four times before cryopreservation. Cells were cryopreserved in Freezing medium (10% DMSO + complete DMEM media) by gradually cooling the cells to -80 °C. Cryopreserved cells were stored in liquid nitrogen. Cryopreserved OSA cells were thawed at 37 °C. OSA cells were cultured in complete DMEM (Dulbecco's Modified Eagle's Medium, Corning) with penicillin (100 IU/ml, Corning), streptomycin (100 ug/ml, Corning), amphotericin B (0.5ug/ml, Corning), and 20% FBS (fetal bovine serum, Sigma) at 37 °C.
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6

Cell Line Maintenance Protocols

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HEK293T (ATCC CRL-3216) and DLD1 (ATCC CCL-221) cells were maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) fetal bovine serum (FBS), at 37° with 5% CO2. PC9 (ATCC 32727) and NCI-H23 (ATCC: CRL-5800) were maintained in RMPI-1640 medium supplemented with 10% (v/v) fetal bovine serum, at 37° with 5% CO2. NIH/3T3 (ATCC CRL-1658) were maintained in Dulbecco’s Modified Eagle’s Medium (Corning) supplemented with 10% (v/v) bovine calf serum (CALF). Mouse KH2 embryonic stem cells were maintained on irradiated MEF feeders in M15 media containing LIF, as previously outlined 28 .
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7

Mouse Macrophage Cell Culture

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RAW 264.7 (American Type Culture Collection, Rockville, MD, USA), a mouse macrophages cell line, was cultured in Dulbecco’s modified Eagle’s medium (Cellgro, VA, USA) supplemented with 10% fetal bovine serum (FBS), 1% penicillin/streptomycin (Invitrogen Co., Waltham, MA, USA), and 4 mM l-glutamine at 37 °C in an atmosphere of 5% CO2.
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8

FOXA3 Mutant Functional Analysis

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FOXA3-WT cDNA (pCMV6-XL5-FOXA3) and vector (pCMV6-XL5) were obtained from Origene (Rockville, MD, USA). FOXA3 mutants at nucleotides 185 (c.185C>T) and 731 (c.731C>T) were generated by site-directed mutagenesis of the FOXA3-WT plasmid (Origene). 10T1/2 cells (American Type Culture Collection, Manassas, VA, USA) were cultured in Dulbecco's modified Eagle's medium (CellGro, Manassas, VA, USA) supplemented with Penicillin/Streptomycin and 10% fetal bovine serum (Hyclone, Logan, UT, USA). A total of 5.0 × 105 10T1/2 cells were transfected using the Nucleofector 96-well shuttle system (Amaxa Biosystems, Cologne, Germany) with either 1.2 μg of control plasmids or with 1.2 μg FOXA3-WT, FOXA3 c.185C>T or FOXA3 c.731C>T. pmaxGFP plasmid (0.3 μg, Amaxa Biosystems) was co-transfected for transfection normalization. Twenty-four hours after nucleofection, cells were treated with 5 μg ml−1 insulin and with 10 μM troglitazone for additional 3 days before cells were harvested for RNA analysis.
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9

Culturing Human Pancreatic Cancer PANC-1 Cells

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The human pancreatic cancer cell line PANC-1 was obtained from the American Type Culture Collection (Rockville, MD). It harbors several common mutations in pancreatic cancer, including KRASG12D, TP53R273H, and homozygous deletion of CDKN2A [23 (link)]. Cells were cultured in Dulbecco’s Modified Eagle’s Medium (Cellgro, Manassas, VA) containing 10% (v/v) fetal bovine serum (Atlanta Biological, Lawrenceville, VA) in a humidified atmosphere with 5% CO2 at 37 °C. Cells were passaged at 80 ~ 90% confluence using 0.05% trypsin with 0.53 mM EDTA (Gibco BRL, Gaithersburg, MD).
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10

Cell Culture Protocol for A549, MDCK, and HEK293T

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The human lung carcinoma cell line A549 was maintained in F-12K medium (Corning Cellgro) supplemented with 10% fetal bovine serum (Thermo Scientific) and antibiotics (100 U/ml penicillin G and 100 g/ml streptomycin). Madin-Darby canine kidney (MDCK) and HEK293T cells were maintained in Dulbecco’s modified Eagle’s medium (Corning Cellgro) supplemented with 10% fetal bovine serum and antibiotics (100 U/ml penicillin G and 100 g/ml streptomycin). All cells were cultured at 37°C and in 5% CO2.
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