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2 protocols using sc 32245

1

Protein Extraction and Western Blotting

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Tumor samples were snap-frozen, ground using Cryomill in liquid nitrogen at 25 Hz for 2 min, and lysed in Tris lysis buffer. Protein concentration was assessed using the Bio-Rad BCA reagent. The following antibodies were used for Western blots: Atg7 (Sigma Aldrich, A2856), Lkb1 (Santa Cruz Biotechnology, sc-32245), LC3 (Novus Biologicals, NB600-1384), Atg5 (Abcam, ab108327), p62 (American Research Products, 03-GP62-C), TOM20 (Abcam, ab186735), and β-actin (Sigma, A1978).
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2

Western Blot Analysis of Autophagy Proteins

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Tissues were snap-frozen in liquid nitrogen, ground using Cryomill in liquid nitrogen at 25 Hz for 2 min, and then lysed in Tris lysis buffer (1M Tris-HCl, 1M NaCl, 0.1M EDTA, 10% NP40). Protein concentrations were measured using the Bio-Rad BCA reagent. Samples were probed with antibodies against Atg7 (Sigma Aldrich, A2856, RRID:AB_1078239), Lkb1 (Santa Cruz Biotechnology, sc-32245, RRID:AB_627890), LC3 (Novus Biologicals, NB600-1384, RRID:AB_669581), p62 (American Research Products, 03-GP62-C, RRID:AB_1542690), p-ACCS79 (Cell Signaling, 3661, RRID:AB_330337), ACC (Cell Signaling, 3676, RRID:AB_2219397), Atg5 (Abcam, ab108327, RRID:AB_2650499), p-S6S235/236 (Cell Signaling, 4858, RRID:AB_916156), S6 (Cell Signaling, 2217, RRID:AB_331355), and β-actin (Sigma Aldrich, A1978, RRID:AB_476692). Western blots were quantified with Image J (National Institutes of Health). The intensities of bands were used to calculate relative ratios of the indicated protein over loading control (β-actin), which were then normalized based on the corresponding ratio in the wild type control sample.
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