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23 protocols using ppads

1

Purinergic receptor blockade in LPS-induced lung injury

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The mice received an i.t. administration of either vehicle (1xPBS), 100 µM Suramin (Cayman Chemical, USA), 100 µM PPADS (4-[[4-formyl-5hydroxy-6-methyl-3-[(phosphonooxy)methyl]-2-pyrinidyl]azo]-1,3-benzenedisulfonic acid tetrasodium salt) (Tocris Bioscience, UK) or 4 U/mL apyrase (Sigma Aldrich, Germany) in 80 µL total volume one hour prior (prophylactic) or 24 hours after (therapeutic) LPS instillation. The concentrations were chosen based on established literature (9 (link)) and preliminary dose-response studies aiming to achieve effective receptor blockade within our experimental system. Mice were sacrificed 24 hours after both LPS application in the prophylactic and antagonist treatment in the therapeutic setting.
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2

In vivo Imaging of Neuroinflammatory Responses

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Lipopolysaccharide (LPS), from Escherichia coli strain 0111:B4 (Sigma, L4391) was dissolved in sterile saline and injected subcutaneously (50 μl, 1 mg/kg body weight) close to the midline of the lower lip. At 12 h, 24 h or 1 month following a single LPS injection, a craniotomy was performed in preparation for in vivo imaging. Pharmacological compounds were applied directly to the cortex on the intact dura prior to mounting the cranial window. Imaging was initiated 30 min after application and drugs were maintained in the preparation during the entire session. BAPTA-AM, PPADS (pyridoxal-5-phosphate-6-azophenyl-2′4-disulfonic acid) and bicuculline were purchased from Tocris. Stock solutions were diluted with sterile saline to a final concentration of 5 μg/ml, 5 mM, and 250 μM, respectively.
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3

Molecular Mechanisms of G Protein-Coupled Receptor Signaling Regulation

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Primary antibodies and their sources were as follows: COX-2 (Cell Signaling Technologies (CST) 12282), β-actin (CST 3700), P-ERK (CST 4370), T-ERK (CST 9102), cPLA2 (CST 2832), STIM1 (Feske Lab #3917), α-Tubulin (Abcam ab52866). Pharmacological tools used in the study were: UTP (Sigma U6875), SLIGKV-NH2 (Tocris 4153), FK-506 (Tocris 3631), BTP2 (Sigma 203890), ATP (Sigma A6419), DiclofeNAC (Tocris 4454), Apocynin (Tocris 4663), NAC (Sigma 106425), U0126 (Tocris 1144), ATPγS (Tocris 4080), AACOCF3 (Tocris 1462), AR-C 118925XX (Tocris 4890), NF546 (Tocris 3892), S3QEL 2 (Tocris 5735), ADPβS (Sigma A8016), UDP (Sigma U4125), NF157 (Tocris 2450), Apyrase (Sigma A6410 Grade VI, High ATPase/ADPase activity), TNP-ATP (Tocris 2464), 5-BDBD (Tocris 3579), A740003 (Tocris 3701), Suramin (ACROS Organics-Fisher AC328540500), PPADS (Tocris 0625), CM4620 was a kind gift from CalciMedica.
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4

Characterization of Pharmacological Agents

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All chemicals of analytical grade were obtained from Merck (Darmstadt, Germany). ODQ, MOPS, BSA, and glutamate were purchased from Sigma-Aldrich (St. Louis, MO, USA). PPADS and t-ACPD were obtained from Tocris Bioscience (Bristol, UK); SNAP and RuR from Calbiochem (La Jolla, CA, USA); 10Panx and 37,43Gap27 from Genscript (Israel). SNAP was dissolved in dimethyl sulfoxide (DMSO), and then, was diluted in buffer solution to reach the final working concentration. The vehicle of SNAP did not have effect per se (data not shown).
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5

Standardized Cell Culture Reagents

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Standard chemicals and cell culture reagents were purchased from Sigma and ThermoFisher. ARL67156, suramin, and PPADS were purchased from Tocris.
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6

Two-Electrode Voltage Clamp of P2X Receptors

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Two-electrode voltage clamp recordings were carried out using a GeneClamp 500B amplifier with a Digidata 1322A analog-to-digital converter and pCLAMP 8.2 acquisition software (Molecular Devices, Menlo Park, CA) at a holding potential of −60 mV. ATP (Mg2+ salt, Sigma) was applied via a U-tube perfusion system for 3 s at 5–10-min intervals (dependent on the P2X receptor) to allow for reproducible responses to be recorded. Antagonists were bath-perfused in ND96 buffer for 5 min before they were co-applied with an EC90 of ATP through the U-tube. To generate inhibition curves, antagonists were co-applied with an EC90 of ATP to standardize any shift in ATP potency. Antagonists fully equilibrated with the receptor during the first application period as the level of inhibition was maintained on a second test application. The inhibitory effects of the antagonists were reversed in the washout period between agonist applications. Antagonists (at maximal concentrations used) were applied to the WT and all mutant receptors in the absence of ATP and were seen to have no effect on the holding current. Suramin was from Sigma, PPADS from Tocris, and NF449 from Abcam.
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7

Pharmacological Modulation of Cellular Signaling

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Capsaicin, L-NA, indomethacin, MOPS, ethidium bromide, ECGS, FITC-dextran (3000 Da), BSA, PE, ACh, LaCl3 and probenecid were purchased from Sigma-Aldrich (St. Louis, MO, USA). PPADS and BIBN4096 were obtained from Tocris Bioscience (Ellisville, MO, USA), SNAP and TEMPOL from Calbiochem (La Jolla, CA, USA), Lucifer Yellow (LY) from Molecular Probes (Eugene, OR, USA), CGRP (alpha isoform, rat) from Bachem (Torrance, CA, USA) and collagenase type I from Worthington (Lakewood, NJ, USA). CGRP8–37, 10panx, 37,43GAP27 and 40GAP27 were synthesized by Genscript (Israel). Capsaicin was dissolved in ethanol; indomethacin, BIBN4096 and SNAP in dimethyl sulfoxide (DMSO) and probenecid in 0.5 M NaOH. Then, these drugs were diluted in the buffer solution to the final working concentration. Application of the vehicle of these drugs (ethanol, DMSO or NaOH) did not have effect per se (data not shown).
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8

Ion Channel Modulation Assay

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5-BDBD, PPADS and AF-353 were obtained from Tocris (Minneapolis, MN). ATP, penicillin–streptomycin, and salts used to prepare the incubation media were purchased from Sigma-Aldrich (St. Louis, MO). LipofectAMINE 2000 reagent was from Invitrogen (Carlsbad, CA).
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9

Immortalized Human Keratinocyte Culture

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Keratinocytes (courtesy of Leena Bruckner-Tuderman, Department of Dermatology, University Hospital Freiburg) isolated from human foreskin were transformed with the human papillomavirus oncogenes E6 and E7 for immortalization (Kaur and McDougall, 1988 (link)). Cells were kept in Keratinocyte Serum-Free Medium (KSFM; Invitrogen, Carlsbad, CA) supplemented with 0.3 ng/ml recombinant EGF and 30 ng/ml bovine pituitary extract and 100 U/ml penicillin/streptomycin (culture medium). The experiment medium contained an additional 20 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (Sigma-Aldrich, St. Louis, MO). For pH experiments, the medium was adjusted to a pH of 7.45 by 2.5 N NaOH or to 6.6 by 10% HCl. The inhibitors CK-666 (Sigma-Aldrich), NSC-23766 (Tocris, Bristol, UK), ZCL-278 (Tocris), PIK-90 (Selleck Chemicals, Houston, TX), AG-1478 (Cayman Chemicals, Ann Arbor, MI), Y-27632 (Merck-Millipore, Billerica, MA), (–)-blebbistatin (Sigma-Aldrich), suramin (Tocris), pertussis toxin (Enzo Scientific, Farmingdale, NY), gallein (Tocris), telenzepine (Tocris), PPADS (Tocris), and CK-689 (Merck-Millipore) were used at the indicated concentrations.
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10

Propagation of Spontaneous Ca2+ Transients in iCx26GJCs

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The propagation of spontaneous Ca2+ transients via gap junctions in iCx26GJCs was carried out using methods modified from a previous study (Schutz et al., 2010 (link)). Samples were incubated for 20 min at 37°C in high-calcium Dulbecco’s PBS (DPBS) containing 2 mM CaCl2 (Nacalai Tesque) in DPBS (Gibco) supplemented with 5 μM fluo-4 AM (Dojindo), 0.01% (w/v) pluronic F-127 (Invitrogen), and 250 μM sulfinpyrazone (Sigma) as loading medium. To record spontaneous Ca2+ transients, we replaced the loading medium with low-calcium DPBS, which contained 20 μM CaCl2.
The pharmacological study of iCx26GJCs was carried out using methods modified from previous studies (Schutz et al., 2010 (link), Tritsch et al., 2007 (link)). The spontaneous Ca2+ activity was recorded for 3 min, then the cells were superfused with PPADS (50 μM; Tocris) or FFA (50 μM; Sigma) for 5 min, followed by washout of the drug and superfusion with low-Ca2+ DPBS for 8 min. Sequential fluorescence images were acquired using a Nipkow disc confocal system (CSU22, Yokogawa) and AQUACOSMOS software (Hamamatsu Photonics). Live-cell imaging experiments were performed at near-physiological temperature (32°–35°C) or room temperature (24°–26°C). Signals were measured as relative changes of fluorescence intensity (Δf/f0), where f0 is the minimum fluorescence and f is the recorded fluorescence, and Δf = f − f0.
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