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32 protocols using ab92516

1

Translocation of Calreticulin in Tumor Cells

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Tumor cells (5×105 cells per well) were planted into a 24-well plate precoated with gel (PureCol® EZ Gel, Sigma, 1:150) and treated with BI2536 for 24 h. To analyze the translocation of CRT in immunofluorescence, the samples were fixed in 4% paraformaldehyde (PFA) before permeabilization with 0.1% TritonX-100, and then stained with a rabbit anti-mouse anti-CRT antibody (ab92516, Abcam, 1:100) for 30 min. Subsequently, the cells were stained with a secondary antibody FITC goat anti-rabbit IgG (GB22303, Servicebio, 1:200). The cytoskeleton was incubated with phalloidin (C2207S, Beyotime, 1:1000) and cell nuclei were stained with 4′, 6-diamidino-2-phenylindole (DAPI, Beyotime). The fluorescence information was acquired by laser confocal microscopy (NIKON Eclipse Ti). For flow cytometry, treated tumor cells were incubated with anti-CRT and secondary FITC goat anti-rabbit IgG as previously described. Then the samples were prepared into 100 μL of PBS suspension and subjected to FACScalibur detection.
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2

Western Blot Analysis of Protein Expression

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Cells or tissues were added with 50 μL radio-immunoprecipitation assay (RIPA) lysis buffer (containing protease inhibitor) (P0013J, Beyotime, Shanghai, China) and protein was gained and quantified by utilization of the bicinchoninic acid (BCA) kit (PC0020, Solarbio). Later, 50 μg of protein was subjected to electrophoresis, and then transferred to nitrocellulose membranes (66485, Pall Corp, East Hills, NY). The membrane was sealed in 5% skimmed milk powder at ambient temperature for 2 h and probed with primary antibodies against KIF3A (ab11259, 1:2000, Abcam), p21 (ab109520, 1:1000, Abcam), p-p21 (ab47300, 1:1000, Abcam), Bax (ab32503, 1:1000, Abcam), Bcl-2 (#4223, 1:1000, Cell Signaling Technology [CST]), Cle-caspase 3 (ab32042, 1:500, Abcam), CD63 (ab134045, 1:1000, Abcam), CD81 (#56039, 1:1000, CST), Hsp70 (#4876, 1:1000, CST), Calreticulin (ab92516, 1:1000, Abcam) and β-actin (#4970, 1:1000, CST) overnight at 4 °C. The next day, the membrane was further incubated with horseradish peroxidase (HRP)-labeled secondary antibody goat anti-rabbit IgG (ab6721, 1:2000, Abcam) at ambient temperature for 1 h. Afterwards, the membrane was visualized by ECL reagent (BM101, Biomiga Inc), and then BioSpectrum 600 imaging system (Ultra-Violet Products, UK) was processed for detection and analysis. β-actin was used as normalizer.
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3

Quantifying Cardiac Interstitial Fibrosis

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Cardiac tissues were fixed with 10% formalin solution, gradually dehydrated, embedded in paraffin, and then cut into 4-μm-thick sections. Interstitial fibrosis was assessed by Masson’s trichrome staining. The percentage of interstitial fibrosis was calculated using the ImageJ software (Version 1.8, National Institute of Health (NIH), Bethesda, MD, USA). For immunohistochemical staining, a primary anti-CRT antibody (1:200, ab92516; Abcam, Cambridge, UK) was used. At least five randomly selected microscopic fields (magnification, 200 ×) were captured.
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4

Immunofluorescence Staining of 4T1 Tumor Cells

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IF staining on cell and tumor tissue sections. Seeded the 4T1 tumor cells into confocal dishes or growing on glass coverslips in the 12‐well plate. Oxa, ART, and OART (2 μM) were added and incubated for 24 h. The tumor tissue was sliced by paraffin embedding technique. Cell and tissue samples were fixed in 4% paraformaldehyde for 10 min and permeabilized in 0.1% Triton X‐100 solution for 10 min (optional). Incubated the primary antibodies with the appropriate concentration, 4°C overnight. Then, incubated the secondary antibodies conjugated with different fluoresceins at room temperature for 1 h. Finally, samples were incubated with DAPI and analyzed by confocal microscopy. The antibodies and their brand used in IF experiment: anti‐CRT (Abcam; ab92516, 1:500), anti‐HMGB‐1 (Abcam; ab18256, 1:1000), and goat anti‐rabbit IgG H&L (Alexa Fluor® 488) (Abcam; ab150077, 1:1000)
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5

Western Blot Analysis of Stress Response

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Cells were lysed in radioimmunoprecipitation assay buffer buffer including protease and phosphatase inhibitors; protein was run on a 10% SDS Tris-glycine gel according to standard practices. After transfer to polyvinylidene difluoride membrane, membranes were blocked with 5% nonfat dry milk (Blotto) in PBS and then incubated in blocking buffer + 0.1% Tween 20 overnight with antibodies: ATF4 (ab184909, 1:1000; Abcam), Phospho S51 eIF2α (ab32157, 1:800; Abcam), eIF2α (9722, 1:100; Cell Signaling Technologies, Danvers, MA, USA), CRP55 (ab92516; 1:2000; Abcam). Detection was carried out using HRP labeled antibodies and ECL.
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6

Immunohistochemical analysis of Calreticulin and LMP1

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Samples were fixed with 10% formalin and 4um paraffin sections were baked in a 60 °C incubator for 2 hours. The immunohistochemical staining procedure was performed following the S-P kit instructions (Maixin, Fujian, China). It was Incubated with Calreticulin antibody (1:500, ab92516, Abcam, UK), LMP1 (1:1000, ab78113, Abcam, UK), overnight at 4 °C, and stained by adding DAB. Finally, the cells were observed with microscope (BX53, Olympus, Japan).
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7

Profiling EV Protein Markers

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MSC-EVs lysates were prepared using 30X ethanol precipitation into RIPA lysis buffer. Lysates were volume loaded and separated on a 12% Bolt Bis-Tris Gel and probed using Abcam antibodies against flotillin-1 (ab133497 at 1:10,000 dilution), Annexin-2 (ab41803 at 1:1000 dilution), Syntenin-1 (ab19903 at 1:1000 dilution), MHC-I (ab110645 at 1:1000 dilution), MHC-II (157210 at 1:10000 dilution), and Calreticulin (ab92516 at 1:1000 dilution).
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8

Western Blot Analysis of OVA Cells

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Western blotting was performed with primary antibodies specific for the following molecules: HMGB1 (ab18265, Abcam), calreticulin (ab92516, Abcam), HSPA2 (bs-18080R, Bioss) and OVA (10 R-1905, Fitzgerald). RM1-OVA (1×106) and MC38-OVA cells (1×106) resuspended in 1 mL medium were treated as described previously. After treatment, the cell suspensions were centrifuged at 2000 g at 4°C for 5 min to obtain the supernatants. The supernatants were further concentrated to 40 µL with a centrifugal filter (UFC803024; Amicon Ultra4, Millipore, Merck) and subjected to western blotting.
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9

Synthesis and Characterization of Cy5.5-Labeled Immune Checkpoint Inhibitor

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2-Chlorotrityl chloride resin (1.2 mmol/g) was purchased from Nankai University resin Co., Ltd. Fmoc-amino acids were obtained from GL Biochem (Shanghai, China). Cy5.5 NHS ester (non-sulfonated) purchased from APEXBIO. Alkali phosphatase (30 U/μL) was obtained from Takara (D2250, Dalian, China) Bio. Inc. Enhanced ATP Assay Kit (S0027) purchased from Beyotime. Both of anti-HMGB1 antibody (ab79823) and anti-carlreticulin antibody (ab92516) were purchased from Abcam. Calreticulin Rabbit mAb (Alexa Fluor 488 conjugate, #62304) was obtained from Cell Signaling Technology. HMGB1 ELISA Kit (OKEH00424) was purchased from AVIVA systems biology. InvivoMAb antimouse PD-L1 (B7-H1) was obtained from BioXcell. APC anti-mouse CD3 antibody (100235), FITC anti-mouse CD8a antibody (100705), APC anti-mouse IFN-γ (505810), PE anti-mouse CD80 (104707), FITC anti-mouse CD86 (105005), Alexa Fluor 647 anti-mouse CD11c (117314), ELISA MAX™ Deluxe Mouse IFN-γ, ELISA MAX™ Deluxe Mouse TNF-α and ELISA MAX™ Deluxe Mouse IL-6 were purchased from Biolegend. Collagenase IV and DNase I were both purchased from Solarbio. Commercially available reagents and solvents were used without further purification, unless noted otherwise.
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10

Validating CALR Expression in HNSCC

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Tissue microarray of HNSCC specimens (HOraC080PG01) was obtained from Shanghai Outdo Biotech Company (Shanghai, China) and used to validate the expression of CALR in HNSCC. Immunohistochemistry was then performed using the staining cycles as follows. In brief, formalin-fixed, paraffin-embedded HNSCC tissue sections were deparaffinized and then underwent microwave treatment in citrate for antigen retrieval. Then, they were blocked and incubated overnight with rabbit anti-Calreticulin antibody (1:500, ab92516, Abcam). Goat anti-rabbit IgG (Alexa Fluor 488, ab150077, Abcam) was used as the secondary antibody at 1/1000 dilution. DAPI was used as nuclear counterstain.
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