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Cdna reverse transcription kit

Manufactured by Tiangen Biotech
Sourced in China

The cDNA Reverse Transcription Kit is a laboratory tool used for the synthesis of complementary DNA (cDNA) from RNA templates. It provides the necessary reagents and protocols to efficiently convert RNA into cDNA for downstream applications such as gene expression analysis, qPCR, and sequencing.

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11 protocols using cdna reverse transcription kit

1

RNA Extraction and qRT-PCR Analysis of Seed Aging

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Total RNA was isolated from 250 mg seeds of TA-lox3 and TA-wt seeds before and after 10 days aging treatment using TRIzol reagent[16 (link)], First-strand cDNA was synthesized from 2 μg of total RNA using a cDNA reverse transcription kit (TIANGEN, KR1601,CHINA) following the manufacturer’s instructions. Real-time quantitative PCR was performed using the Bio-Rad CFX-96 system and a SYBR Green Ex-Taq Premix (TAKARA,RR420A, JAPAN). For the quantitative RT-PCR analysis, LOX1 and LOX2 specific primers were used and EF-1α was used as reference gene. The primer used for quantitative RT-PCR as follows: LOX1 (F-5’-CCAAGGCTTATGTTGCTGTTA-3’andR-5’-CCGCCGTTGATGAGTGT-3’), LOX2(F-5’-GGAGAAGAAGACGCGGTTG-3’andR-5’- ATACCCGGCGCCATCAT C-3’)and EF-1α (F-5’-CCTGTGGAAGTTCGAGACCA-3’and R-5’-CTGGCCAT CCTTGGAGATAC -3’).
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2

Quantitative Analysis of circRNA and miRNA

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RNA isolation reagents (#DP419; Tiangen) were used for RNA preparation of AC16 cells according to the manufacturer's protocol. Nuclear and cytoplasmic RNAs were isolated after nucleocytoplasmic separation following the instruction of the PARIS™ Kit (#AM1921; Thermo Fisher). Reverse transcription processes were performed using the cDNA Reverse Transcription Kit (#KR116; Tiangen) and miRNA RT reagents (#4366597; Thermo Fisher) according to the guidebooks. Quantitative real‐time polymerase chain reaction (qRT‐PCR) was performed on 7500 Real‐time PCR System (Applied Biosystems) with SYBR Green PCR Master Mix (#FP207; Tiangen) in accordance with the guidebooks. The qRT‐PCR was cycled at 95°C for 60 s, 40 cycles at 95°C for 5 s, and at 60°C for 15 s. GAPDH and U6 were used to normalize circAPBB2/DUSP14 and miR‐18a‐5p expression, respectively, through the 2‐∆∆Ct method. The primer sequences are shown in Table 1.
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3

Differential Gene Expression in IL15Rα KO

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The matrix including raw counts from mutant and control groups was imported into R (v.3.6.3). The DESeq2 (Love et al., 2014 (link), 2) (v.1.26.0) package was applied to analyze whether the expression pattern had changed due to IL15Rα KO and to identify significantly up-/downregulated genes in cortex or hippocampus. Only genes with an absolute value of log2 (fold change) ≥ 1 and p-value < 0.05 were regarded as differentially expressed between mutant and control groups.
Quantitative real-time PCR (qRT-PCR) was performed to evaluate and validate the expression pattern of DEGs in the cortex and hippocampus (Supplementary Table S1). cDNA was synthesized using the cDNA Reverse Transcription Kit (TIANGEN). All reactions were run in duplicate PCR amplification cycles in a real-time PCR instrument ABI7500 (ABI). Target mRNA was quantified relative to the β-actin gene as a reference molecule and analyzed with two-tailed unpaired Student’s t-tests to assess statistical significance of gene expression levels between the IL15Rα–/– and control groups in cortex or hippocampus.
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4

Total RNA Isolation and qRT-PCR Analysis

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Total RNA isolation from A549 cells was performed using TRIzol Reagent (Invitrogen, USA) then cDNA synthesis was performed using a cDNA reverse transcription kit (TIANGEN, China). Next, quantitative real-time PCR (qRT-PCR) was performed using a 2× Taq Plus PCR MasterMix kit (TIANGEN, China) and PCR primers with sequences as listed in Table 1.
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5

Quantitative Analysis of Cytokine Expression in RAW264.7 Cells

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Total RNA of RAW264.7 cells was extracted with TRIzol reagent (Invitrogen, USA). Reverse transcription was performed with a cDNA Reverse Transcription Kit (TIANGEN, China) according to the manufacturer’s instructions. Quantitative real-time PCR was carried out using Applied Biosystems 7300 (Life Technologies, USA). The reaction mixture was performed with SYBR® Premix Ex Taq™ (TaKaRa, China) according to the manufacturer’s protocols. The reaction conditions were 40 cycles of two-stage PCR consisting of denaturation at 95 °C for 15 s and annealing at 60 °C for 1 min after an initial denaturation step at 95 °C for 10 min The primer sequences were as follows: mouse TNF-α, forward 5‘ggcggtgcctatgtctcag3’ and reverse 5‘ggctacaggcttgtcactcg 3’; mouse IL-10, forward 5‘acatactgctaaccgactcct3’ and reverse 5‘ggtcttcagcttctcaccc3’; mouse IL-12p40, forward 5‘atgtggaatggcgtctc3’ and reverse 5‘gtctcctcggcagttgg3’; and mouse β-actin, forward 5‘agagggaaatcgtgcgtgac 3’ and reverse 5‘cgctcgttgccaatagtgat3’. For the relative comparison of mRNA expression levels, the data were analyzed with a ΔΔCt method and normalized to the amount of β-actin cDNA as an endogenous control.
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6

Quantification of IRAK2 Expression in Kidney

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Total RNA was extracted from kidney tissues using TRIzol reagent (Invitrogen, CA, USA) according to the manufacturer’s instructions. The concentration and purity of the isolated RNA were determined using a NanoDrop spectrophotometer (Thermo Fisher Scientific, MA, USA). Total RNA was reverse-transcribed into cDNA using a cDNA Reverse Transcription kit (TIANGEN, Beijing, China) following the manufacturer’s protocol. RT-qPCR was performed using the SYBR Green PCR Master Mix (Lifeint, Xiamen, China) on a StepOnePlus Real-Time PCR System (Agilent Scientific, CA, USA). The PCR cycling conditions were an initial denaturation at 95°C for 3 min, followed by 40 cycles of 95°C for 12 s and 60°C for 40 s. A final melting curve analysis was performed to confirm the specificity of PCR products. The primer sequences for IRAK2 were: forward, 5´-CAGTTCGCTTCCTACGTGAT-3´; reverse, 5´-AGATGTGCTCTCAGGAACCG-3´. GAPDH was used as the internal control, and the primer sequences were: forward, 5´-GGAAAGCTGTGGCGTGAT-3´; reverse, 5´-AAGGT-GGAAGAGTGGGAGT-3´. The relative expression levels of IRAK2 were calculated using the 2-ΔΔCt method.
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7

Quantitative Analysis of Histamine and Estrogen Receptors in OVCAR-3 Cells

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Total mRNA isolation from OVCAR-3 cells was performed using Trizol Up reagent (TransGen Biotech) and samples were reverse-transcribed using a cDNA reverse transcription kit (Tiangen Biotech) according to the manufacturer’s instructions. Quantitative real-time PCR (qRT-PCR) analyses of histamine receptors and ERs were performed using the TransStart® Green qPCR SuperMix (Bio-Rad Laboratories, California, USA). The primer pairs used for the amplification of the target genes are presented in Supplementary Table 2.
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8

Profiling miRNA and mRNA Expressions

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The DNA/RNA isolation kit (Tiangen, Beijing, China) was used to extract total RNA. Primers were designed and synthesized by TIANGEN BIOTECH Co., LTD). The following primers were used: U6 forward, 5′-CTGGCTTCGGCAGCACA-3′; reverse, 5′-AACGCTTCACGAATTTGCGT-3′. has-miR-195-3p primer sequence: forward, 5′-CCAAUAUUGGCUGUGCUGCUCC-3′. RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Tiangen) following the manufacturer’s instructions. The following primes were used: BDNF (GeneCopoeia, Guangzhou, China) forward, 5′-GGCTTGACATCATTGGCTGAC-3′, reverse, 5′-GCCGAACTTTCTGGTCCTCAT-3′; GAPDH forward, 5′-GCACCGTCAAGGCTGAGAAC-3′, reverse, 5′-TGGTGAAGACGCCAGTGGA-3′. The RT-qPCR reaction system (20 µL) contained 2 µL cDNA, according to the manufacturer’s instructions. U6 or GAPDH served as internal controls. The relative transcription levels of target genes were calculated using the 2−ΔΔCq method. ΔΔCq was calculated using the following equation: ΔΔCq = [Cq (target gene) − Cq (internal reference gene)] experimental group − [Cq (target gene) − Cq (internal reference gene)] control group.
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9

RNA Extraction, cDNA Synthesis, and qPCR

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Total RNA was extracted using TRIzol following manufacturer’s instructions (15596026, Invitrogen, Waltham, MA, USA). cDNA was synthesized with a cDNA reverse transcription kit (KR116-02, Tiangen, China) from 2 μg total RNA. The qPCR was performed using SYBR Green (AQ601, TransGen Biotech, Beijing, China) and the LC96 real-time PCR detection system (Roche, Mannheim, Germany) according to provided instructions.
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10

Quantifying Inflammatory Mediators in Exosomes, Cells, and Brain Tissues

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According to the manufacturer’s suggested protocol, the total RNA of exosomes, cells, and brain tissues was extracted with an EasyPure miRNA Kit (ER601, Transgenic, Beijing, China). The concentration and purity of samples were quantified using a Nanodrop ND-2000 (Thermo Fisher Scientific, Waltham, MA, USA). Reverse transcription was carried out using a cDNA reverse transcription kit (Tian Gen, Beijing, China). The cycle threshold was detected by a Real-Time PCR Detection System (Bio-Rad, Hercules, CA, USA). All mRNA levels were normalized to glyceraldehyde 3-phosphate dehydrogenase (GAPDH). The primers of inflammatory mediators were designed and synthesized by Sangon Biotech (Shanghai, China). For miR-124 detection, cDNA reverse transcription and RT-PCR analysis were carried out using the Hairpin-it miR-124 RT-PCR Quantitation Kit (GenePharma, Shanghai, China). U6 was regarded as the control. The details of primer sequences are listed in Table 1. The data were analyzed with the 2−△△ Ct method.
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