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2 protocols using anti p atm ser 1981

1

Whole Cell Protein Extraction and Western Blot

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Whole cell protein extracts were prepared using the SLB buffer (50 mM Tris-HCl pH 6.8, 10% glycerol, 2% SDS). The amount of protein was measured using the BCA method. Equal amounts of proteins (20 µg) were separated electrophorectically in 8%, 12%, or 15% SDS-polyacrylamide gels and afterwards transferred to nitrocellulose membranes. Membranes were blocked in 5% non-fat milk dissolved in TBS containing 0.1% Tween-20 (Sigma Aldrich, Poznan, Poland) for 1 h at room temperature (RT) and incubated with one of the primary monoclonal or polyclonal antibodies: anti-ATM (1:500), anti-p-ATM Ser 1981 (1:1000), anti-DNA-PKcs (1:2000), anti-p-DNA-PKcs Ser 2056 (1:1000), H2AX (1:500) and anti-p-H2AX Ser 139 (1:1000) (Abcam, Cambridge, UK), anti-p53 (DO-1) (1:500), anti-p21(C-19) (1:500) (Santa Cruz Biotechnology Inc., Dallas, Texas, USA), anti-p-p53 Ser 15, anti-Chk2, anti-p-Chk2 Thr 68, anti-p65 and anti-p-p65 Ser 536 (Cell Signaling, Lab-JOT Ltd., Warsaw, Poland), anti-PARP1 (1:1000) (Becton Dickinson, Diag-med, Warsaw, Poland), and anti-GAPDH (1:50000) (Merck Millipore, Warsaw, Poland). The proteins were detected with appropriate secondary antibodies conjugated with horseradish peroxidase and ECL reagents (Thermo Scientific), according to the manufacturer’s protocol.
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2

Western Blot Analysis of DNA Damage Signaling

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Whole cell protein extracts were prepared according to the Laemmli method [13] . Equal amounts of protein were separated electrophorectically in 8, 12 or 15% SDS-polyacrylamide gels and afterwards transferred to nitrocellulose membranes. Membranes were blocked in 5% non-fat milk dissolved in TBS containing 0,1% Tween-20 (Sigma Aldrich, Poznan, Poland) for 1 h at RT and incubated with one of the primary monoclonal or polyclonal antibodies: anti-ATM (1∶500) (Millipore, Merck, Warsaw, Poland), anti-p-ATM Ser 1981 (1∶1000), H2AX (1∶500) and anti-γH2AX (1∶1000) (Abcam, Cambridge, UK), anti-p16 (1∶500), anti-p53 (DO-1) (1∶500), anti-p21 (C-19) (1∶500) (Santa Cruz Biotechnology Inc., Dallas, Texas, USA), anti-p-p53 Ser 15, anti-Chk1, anti-p-Chk1 Ser 317, anti-Chk2, anti-p-Chk2 Thr 68, anti-NBS1 Ser 343 (Cell Signaling, Lab-JOT Ltd., Warsaw, Poland), anti-PARP1 (1∶1000) (Becton Dickinson, Diag-med, Warsaw, Poland) anti-NBS1 (1∶500), anti-β-actin (1∶50000) (Sigma Aldrich, Poznan, Poland) and anti-GAPDH (1∶50000) (Millipore, Merck, Warsaw, Poland). The proteins were detected with appropriate secondary antibodies conjugated with horseradish peroxidase and ECL reagents (GE Healthcare, Buckinghamshire, UK), according to the manufacturer’s protocol.
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