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17 protocols using anti c myc

1

c-MYC Expression Analysis in HCT116 Cells

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After 24 h incubation of HCT116 cells with the above mentioned concentrations of Tz 1, cells were washed once with PBS (pH 7.4) and lysed with ice-cold cell lysis buffer (20 mM Tris, 100 mM NaCl, 1 mM EDTA in 0.5% Triton X-100). Cell lysate was collected from the treated and untreated cells, and the total protein content was estimated by Folin–Lowry method. Sixty micrograms of protein from each cell treatment was loaded and separated by 12% SDS–PAGE and transferred to nitrocellulose membrane. The membranes were blocked, washed and probed using 1:700 dilution of anti-c-MYC (Invitrogen, catalogue number 710007) and anti-GAPDH antibodies (Invitrogen, catalogue number 398600) for overnight at room temperature. The blots were washed and immunoreactive bands were incubated with a 1:2,000 dilution of respective enzyme conjugated secondary antibodies for 2 h at room temperature. Binding signals were visualized with enzyme substrate (MP) and relative band intensities were determined using ImageJ software.
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2

Immunohistochemical and Biochemical Analysis of BRI2 Amyloidosis

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For immunohistochemical and biochemical studies, we use antibodies against the ABri and ADan amyloid peptides which also recognize the C-terminus of the immature forms of mutant BRI2 (Vidal et al., 2009 (link)). We also used abs against the N-terminus of BRI2: ab14307 (Abcam) and 11–26 (Akiyama et al., 2004 (link)). Abs against c-Myc (Santa Cruz) and against beta-actin (AC-15, Sigma) were also used. Secondary abs used for Western blot ECL detection were donkey anti-rabbit IgG, HRP (NA934, GE Healthcare), anti-mouse IgG, HRP (NA931, GE Healthcare), and anti-chicken IgY, HRP (A9046, Sigma-Aldrich). For confocal studies, BRI2 proteins were detected with anti-c-Myc and secondary Alexa Fluor 594 goat anti-mouse (Invitrogen). Calnexin was detected with anti-Calnexin (Abcam) and secondary Alexa Fluor 488 goat anti-rabbit (Invitrogen). GM130 was detected with anti-GM130 (Abcam) and secondary Alexa Fluor 488 goat anti-rabbit (Invitrogen).
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3

Western Blot Analysis of Keloid Fibroblasts

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Keloid fibroblasts were lysed with Cell Extraction Buffer (Invitrogen). The relevant cellular lysates were separated on 12% SDS‐PAGE and transferred to NC membrane, which were blocked with 5% non‐fat milk in phosphate‐buffered saline (PBS) for 2 hours and incubated with primary antibody overnight at 4°C and secondary antibody at room temperature for 1 hours. GE Healthcare ECL system was utilised to develop the signal, and the intensity of the interest bands was calculated with NIH‐Image J1.51p 22 by correcting with GAPDH expression. Primary antibodies utilised were indicated: anti‐FBXL6 (1:1000 dilution, SAB1407299, Sigma, St. Louis, MO), anti‐c‐MYC (1:1000 dilution, MA1‐980, Invitrogen), anti‐Collagen I (1:2000 dilution, PA5‐95137, Invitrogen), and anti‐GAPDH (12 000 dilution, MA1‐16757, Invitrogen).
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4

Antibody Validation for Virus Detection

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α-sarcin was purchased from Santa Cruz. 35S methionine and 35S cysteine were purchased from Perkin Elmer. Alexa FluorA647 succinimidyl ester was purchased from ThermoFisher Scientific. Inhibitors were purchased from commercial vendors as follows: Aim-100 (Apexbio), Wiskostatin (Sigma), Dynasore (Sigma), Pitstop-2 (Sigma), CK-869 (Sigma), Pirl1 (Hit2leads). Anti-EMCV mouse polyclonal antibodies were provided by Michael Diamond. Anti-poliovirus antibodies were provided by Nihal Altan-Bonnet. Other antibodies were obtained from commercial vendors as follows: Anti-coxsackie virus B3 antibodies (ThermoFisher), Anti-adenovirus A5 antibodies (ThermoFisher), Anti-influenza A virus NP antibodies (Millipore), Anti-TNK2 (A11) (Santa Cruz), Anti-WASL (Abcam and Sigma), Anti-actin, clone C4 (Sigma), Anti-NCK1 (Millipore), enterovirus D68 Ab (GeneTex), Anti-HA (ThermoFisher), Anti-Flag (GenScript), Anti-c-Myc (Invitrogen), Anti-double stranded J2 antibodies (Scicons).
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5

Western Blot Analysis of c-Myc

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We harvested transfected cells and lysed them in Radioimmunoprecipitation assay (RIPA) buffer. Protein concentration was measured using the BCA kit (Bicinchoninic Acid Assay - Thermo Scientific). We loaded 50 μg (or 100 μg) of total protein in a well. Proteins were separated by sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) and subjected to immunoblotting. Membranes were probed with mouse antibodies against anti-c-Myc (13–2500, Invitrogen) and anti-α-Tubulin (DM1A, Calbiochem). The secondary antibody was HRP-conjugate anti-mouse IgG (H+L) (Calbiochem). For detection, we used an ECL kit (Thermo Scientific).
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6

Protein Expression Analysis by Immunoblotting

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Immunoblots were performed as previously described [50 (link)]. The following antibodies were used: anti-AKT1 (2H10), anti-AKT2 (L79B2), anti-AKT3 (L47B1), anti-mTOR (7C10) and anti-AMPK-alpha (2B7), purchased from Cell Signaling (Danvers, MA, USA); anti-HADHA, anti-VDAC1, anti-HARS2 and anti-SSBP1 obtained from Abcam (Cambridge, UK); anti-cMYC purchased from Invitrogen; anti-β-actin and anti-LC3B obtained from Sigma; and HRP anti-mouse and anti-rabbit antibodies purchased from Dako (Jena, Germany). Densitometry readings were performed with ImageJ (SYBYL Project, Newcastle, UK) by normalizing with background.
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7

Stable Huntingtin Fragment Expression in PC12 Cells

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PC12 (rat adrenal gland phaeochromocytoma) cells were grown at 37°C and 5% CO2 in Dulbecco's modified Eagle's medium (DMEM; Life Technologies, Carlsbad, CA) with 20% fetal bovine serum (FBS; Atlanta Biologicals, Flowery Branch, GA), 100 units/ml penicillin and 100 units/ml streptomycin (Life Technologies, Carlsbad, CA). pcDNA3.1mycC expressing human huntingtin fragment (1–90) containing 73 polyglutamine repeats (Coriell Institute; CHDI-90000034) was used for stable transfection. Cells were seeded to 70% confluency and grown overnight. 15 µl of Attractene Transfection Reagent (Qiagen, Gaithersburg, MD) was added to 4 µg plasmid DNA diluted in 300 µl Opti-MEM (Life Technologies, Carlsbad, CA). Cells were grown in complete media and selected for four weeks using 500 mg/ml G418 (Life Technologies, Carlsbad, CA). To create monoclonal cultures, single colonies were isolated using dilution cloning, picked with filter paper, grown in a 6-well plate and screened for transgenic expression by Western blot analysis using mouse Anti- c-Myc (Novex, R950-25, Life Technologies, Carlsbad, CA).
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8

Xenograft Model of Esophageal Cancer

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All research involving animals complied with international guidelines and protocols approved by the Ethics Committee on Animal Care and Use of Affiliated Hospital of Chifeng University. For xenograft model studies, female Balb/c nude mice age‐matched between 6 and 8 weeks (Beijing Vital River Laboratory Animal Technology Co., Ltd) were implanted with 2 × 106 sh‐circ_0000654‐ or sh‐NC‐transduced ECA‐109 cells (resuspended in 200 μl phosphate buffered saline) via subcutaneous injection (six mice each group). Tumor volume was periodically monitored by a digital caliper and evaluated by the 0.5 × length × width2 formula. Xenograft tumors were harvested and weighed after 28 days. Fresh tumor tissues were used to quantify circ_0000654 and miR‐375 expression by qRT‐PCR. Paraffin‐embedded tumor tissues were processed by immunohistochemistry analysis using anti‐BCL‐2 (Cat#PA5‐20068), anti‐c‐Myc (Cat#PA5‐85185), and anti‐E2F3 (Cat#PA5‐106407, all from Life Technologies) antibodies under standard protocols.30
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9

Immunoblotting of Cell Signaling Proteins

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After equal amounts (30 μg) of protein were separated on NuPAGE Novex 4%–12% gels (Thermo Fisher Scientific), the resulting gels were electroblotted onto nitrocellulose membranes (GE Healthcare). For immunoblotting, we used anti‐E2F3 (Cat#PA5‐114490; Life Technologies), anti‐c‐Myc (Cat#PA5‐85185; Life Technologies), anti‐BCL‐2 (Cat#PA5‐20068; Life Technologies), and anti‐β‐actin (Cat#ab8227; Abcam) primary antibodies and goat anti‐rabbit IgG secondary antibody (Cat#G‐21234; Life Technologies) before addition of a chemiluminescent substrate (Thermo Fisher Scientific).
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10

ARV p17 Protein Interaction Assay

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To further confirm whether the ARV p17 protein interacts with PQBP1, IGF2BP1 or FGF1, co-IP assays were carried out. After cotransfection of p17-Flag with recombinant vectors expressing PQBP1-Myc, IGF2BP1-Myc or FGF1-Myc for 48 h in DF-1 cells, immunoprecipitation was performed using an anti-c-Myc or anti-Flag agarose affinity gel (Thermo Fisher Scientific, 23620, Waltham, MA, USA) according to the manufacturer’s protocol. Briefly, cells were scraped from the culture plate and lysed with a mixture of RIPA buffer (Beyotime, Beijing, China) containing PMSF. After centrifugation for 20 min at 4 °C, the supernatant was collected, mixed with 10 μL of agarose slurry and incubated overnight at 4 °C. The protein agarose mixture was washed 3 times with TBST and resuspended in 2× nonreducing sample buffer. Finally, the liquid was heated for 5 min, with 2 μL of 2-ME added to the samples during denaturation, followed by analysis by Western blotting with specific antibodies.
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