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60 protocols using jsh 23

1

Trophoblast Cell Inflammation Regulation by lncRNA BC030099

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Human trophoblast cell HTR-8/SVneo was purchased from Tongpai (Shanghai, China) Biotechnology Co., Ltd., and culture conditions were as follows: RPMI-1640 medium and 10% fetal bovine serum (FBS). LPS was applied to induce cellular inflammation [15 (link)], and in addition, lncRNA BC030099 was knocked down, which are grouped into the si-control, si-con+LPS, si-BC030099, and si-BC030099+LPS groups. In addition, we added 10 μM NF-κB-specific inhibitor JSH-23 (Merck, Germany) [16 (link)], grouped as the control, LPS, JSH-23, and LPS+JSH-23 groups. lncRNA BC030099 expression was knocked down. si-BC030099 and negative control si-control were synthesized by Sangon Biotechnology Co., Ltd. (Shanghai, China).
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2

Chemotaxis Assay for Macrophage Migration

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Migration assays were performed as previously described54 . Freshly isolated BMDMs (100,000 cells) were seeded in the top chamber of a 24-well PET membrane (8 mm pore size). Cells translocated to the lower chamber in response to exposure in the lower chamber of vehicle or 100 ng/ml CX3CL1 (472-FF; R&D) in the presence or absence of either an AKT inhibitor (MK-2206; 10 μM, Cayman), PI3K inhibitor (BEZ235; 10 μM, Cayman), EGFR inhibitor (erlotinib, 10 μM, LC laboratories) or NF-κB inhibitor (JSH23, 30 μM, Sigma-Aldrich) for 3 h. Cells in the upper chamber were removed with a cotton swab, and the filters were fixed with 70% ethanol and stained with 2% crystal violet. Filters were photographed on a Leica DMi1 microscope and total cell number was counted.
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3

Preparation of Specific Inhibitor Solutions

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TRAF6‐specific inhibitor 6877002 (IC50 15.9 μm),88 NF‐κB‐specific inhibitor JSH‐23 (IC50 7.1 μm)89 and JAK3‐specific inhibitor PF‐06651600 (IC50 33.1 nm)90 were dissolved in DMSO and deionised water (all from Sigma‐Aldrich), respectively, and sterile filtered using a 0.22 μm mixed cellulose ester membrane filter (Merck, Burlington, VT, USA). Final DMSO concentrations did not exceed 0.3% (v/v) in cell culture experiments.
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4

Modulating METTL3 in Intestinal Cells

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For METTL3 knockdown or overexpression, lentivirus containing specific short hairpin RNA (#1 sh-METTL3 or #2 sh-METTL3, GenePharma, Shanghai, China) or METTL3-overexpressing fragment was transfected into MODE-K cells using polybrene (Invitrogen). 48 h later, the cells were harvested for further investigation. The scramble shRNA was used as a negative control (sh-NC). The sequences were listed in Table S1.
For LPS stimulation, MODE-K cells were incubated with 200 ng/ml LPS (Sigma-Aldrich, USA) for 48 h.
For NF-κB inhibition, MODE-K cells were incubated with 10 μM JSH-23 (Sigma-Aldrich) for 48 h.
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5

Murine Immune Cell Stimulation Reagents

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R848 (TLR7 ligand) and CpG-B ODN 1826 (murine TLR9 ligand) were purchased from Invivogen (San Diego, CA, USA). Lipopolysaccharide (LPS, TLR4 ligand from Salmonella Minnesota) was from Sigma-Aldrich(St. Louis, MO). Recombinant murine BAFF was from Biolegend (San Diego, CA). ODN2088 and ODN20958 were from Miltenyi Biotec GmbH (Bergisch Gladbach, Germany). JSH23 (4-methyl-N1-(3-phenyl-propyl)-benzene-1,2-diamine, Sigma-Aldrich), SB203580 (4-(4-fluorophenyl)-2-(4-methylsulfinylphenyl)-5-(4-pyridyl)-1H-imidazole) (Sigma-Aldrich). Amino-actinomycin D (7-AAD) was obtained from BD Bioscience (San Jose, CA, USA). The non-secreting mouse myeloma cell line SP2/0 was obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). The murine anti-U1-70 K (RNP) hybridoma cell line 2.73 was a gift of Dr. Sally Hoch [17 (link)]. Additional hybridomas included 172.4 (murine anti-CD100, ATCC), 11B11 (rat IgG1 anti-mouse IL-4, ATCC), Pab101 (murine IgG2a anti-SV40 large T antigen, ATCC), 111 (murine IgG1 anti-Ku), and 162 (murine IgG2a anti-Ku).
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6

Cisplatin and Pemetrexed Treatment of Cells

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Cisplatin and pemetrexed chemotherapeutics were used to treat cells (Selleckchem). TNF-α was used as an in vitro stimulatory agent (Sigma-Aldrich). JSH-23 was used as an in vitro inhibitor of p65 activity since it is known to selectively prevent nuclear translocation (Sigma-Aldrich).
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7

Fibroblast Stimulation by IL-1α/β

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Recombinant IL-1α/β or cancer cell CM were used to stimulate MRC-5 cells or primary mouse lung fibroblasts from mice (NSG, Il1r1tm1Roml C57BL/6 or WT C57BL/6). Primary lung fibroblasts were cultured in fibroblast-specific MEMα medium. When treatments included IL-1R blockade or NF-κB inhibition, MRC-5 were seeded in the presence of 20 µg/ml anti-IL-1R1 antibody or Normal Goat IgG control (R&D), or 5 µM JSH-23 (Sigma-Aldrich) or 0.1% DMSO as a vehicle. The next day, medium was aspirated, fibroblasts were washed with 1 ml PBS per well, and 1 ml CM or serum-free MEMα were added. Overall, 1 ng/ml human recombinant IL-1α/β (Peprotech) or 0.1% BSA in PBS as carrier control as well as 20 µg/ml anti-IL-1R1/IgG control or 5 µM JSH-23/ 0.1% DMSO vehicle were added to the respective wells. After 48 h incubation at 37 °C, fibroblasts were washed with PBS and lysed in RLT buffer (Qiagen) for RNA extraction.
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8

Modulation of Microglial Activation by LPS

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Bacterial lipopolysaccharide (LPS) from E. coli serotype 0111:B4, trans-cinnamaldehyde (TCA), and JSH-23 were purchased from Sigma-Aldrich (St. Louis, MO, USA). LPS was dissolved in sterile saline. TCA and JSH-23 were reconstituted in dimethyl sulfoxide (DMSO). Anti-CD11b monoclonal antibody (OX-42, microglial marker) was from Abcam (Cambridge, UK). Dulbecco's modified Eagle's medium (DMEM), Roswell Park Memorial Institute medium (RPMI), and fetal bovine serum (FBS) were purchased from Gibco (Rockville, MD, USA). All other reagents were purchased from Sigma-Aldrich unless otherwise described.
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9

Hippocampal Neuron Transfection and Treatment

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Primary hippocampal neuronal cultures were transfected using shRNA or control vectors as in previous experiments. At 4 DIV, cells were treated with 5 μM of SN50, SN50m (both from Calbiochem), or JSH-23 (Sigma-Aldrich) or fresh medium. Treatments to replenish fresh drugs were repeated after 1.5 days by a complete medium change, and cells were fixed at 7 DIV using 4% paraformaldehyde. Dendrite analysis was performed as described above.
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10

Cultivation and Manipulation of Metanephric Mesenchymal Precursor Cells

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Rat primary embryonic metanephric mesenchymal precursor cells (MM), KSHV-transformed MM cells (KMM)[8 (link)], MM cells infected by KSHV mutants with a cluster of 10 precursor miRNAs deleted (ΔmiRs)[10 (link)], vFLIP deleted (ΔvFLIP)[18 (link)], vCyclin deleted (ΔvCyclin)[12 (link)] and 293T cells were maintained in Dulbecco’s modified Eagle’s medium (DMEM; with 25 mM glucose, 4 mM L-glutamine and 2 mM sodium pyruvate) supplemented with 10% fetal bovine serum (FBS; Sigma-Aldrich, St. Louis, Mo) and antibiotics (100 μg/mL penicillin and 100 μg/mL streptomycin). Only MM and KMM cells at early passage (<15) were used for the experiments. For glucose starvation, cells were cultured in DMEM without glucose (with 4 mM L-glutamine and 2 mM sodium pyruvate), supplemented with 10% FBS (Sigma-Aldrich). PEL cell lines BCBL1, BC3 and BCP1, and EBV-negative Burkitt’s lymphoma cell line BJAB and KSHV-infected BJAB (BJAB-KSHV) were cultured in RPMI-1640 medium with 10% FBS. JSH-23 (inhibitor of NF-κB nuclear translocation), BAY 11–7082 (an inhibitor of IκBα phosphorylation) and LY294002 (PI3K inhibitor) were purchased from Sigma-Aldrich.
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