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M mlv rt kit

Manufactured by Promega
Sourced in United States

The M-MLV RT kit is a reverse transcriptase enzyme used for the conversion of RNA to complementary DNA (cDNA). It provides a reliable and efficient tool for gene expression analysis and other applications requiring cDNA synthesis from RNA samples.

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44 protocols using m mlv rt kit

1

Real-Time Validation of Gene Expression

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Ten genes (six from profile 5 and four from profile 2) were analyzed by quantitative real-time RT-PCR (qRT-PCR) for validating the data from RNA sequencing. The primers of each gene are listed in Table S8. Approximately 1 μg RNA was reverse transcribed using an MMLV-RT Kit (Promega, Madison, WI, USA) according to the manufacturer’s protocol. Next, qRT-PCR was performed using a standard SYBR Green PCR kit (Takara, Dalian, China) and was processed on StepOnePlus™ Real-Time PCR Detection System (Applied Biosystems, Foster City, CA, USA). The qRT-PCR conditions were used as follows: 95 °C for 5 min, followed by 40 cycles of 95 °C for 15 s, 60 °C for 30 s, and 72 °C for 30 s. β-Actin was used as an internal control to normalize gene expression and assays were run in triplicate. The 2−ΔΔCt method was used to determine the expression level differences [68 (link)].
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2

Quantifying TWIST1 Gene Expression

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The sequence of the primer for TWIST1 is summarized in S4 Table. Total RNA was extracted using Trizol Kit (Invitrogen) and reverse transcribed by using the M-MLV RT kit (Promega, Madison, WI, USA). QRT-PCR was performed with SYBR Green dye (Roche Diagnostics, Mannheim, Germany).
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3

Quantification of miR-448 Expression

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Total RNA from tissues and cells were extracted using the TRIZOL reagent (Invitrogen) and reverse transcribed by using the M-MLV RT kit (Promega). For the detection of mature miR-448, isolation of total RNA from cells was performed using the miRVana miRNA Isolation Kit (Ambion, USA). According to the manufacturer's instructions, miR-448 was investigated using the miRVana real-time PCR miRNA Detection Kit and real-time PCR Primer Sets. The primers for real-time PCR were shown as below. miR-448: Forward primer: TTATTGCGATGTGTTCCTTATG, Reverse primer: ATGCATGCCACGGGCATATACACT. U6 small nuclear RNA was used for normalization. Real-time PCR assay was performed on ABI PRISM7500 system (Applied Biosystems, USA).
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4

Quantifying miR-338-3p and MACC1 Expression

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Total RNA was extracted from tissues and cell lines using the TRIzol reagent (Invitrogen; Thermo Fisher Scientific, Inc.) and reverse transcribed at 65°C for 120 sec using the M-MLV RT kit (Promega Corporation, Madison, WI, USA) following the manufacturer's protocol. The expression of miR-338-3p was quantified using TaqMan microRNA assays (Ambion; Thermo Fisher Scientific, Inc.) with the ABI 7900 Sequence Detection System (Applied Biosystems; Thermo Fisher Scientific, Inc.). The mRNA expression of MACC1 was detected using SYBR® Green qPCR SuperMix (Invitrogen; Thermo Fisher Scientific, Inc.) and quantified using ABI 7900 Sequence Detection System. Amplification was performed using the following thermocycling protocol: Preheating at 95°C for 10 min, followed by 40 cycles of denaturation at 95°C for 5 sec and annealing/extension at 60°C for 20 sec. The primers used for the current study were as follows: miR-338-3p forward 5′-TGCGGTCCAGCATCAGTGAT-3′ and reverse 5′-CCAGTGCAGGGTCCGAGGT-3′; U6 forward 5′-GCTCGCTTCGGCAGCACA-3′ and 5′-GAGGTATTCGCACCAGAGGA-3′; MACC1 forward 5′-CCTTCGTGGTAATAATGCTTCC-3′ and reverse 5′-AGGGCTTCCATTGTATTGAGGT-3′; GAPDH forward 5′-ACCACAGTCCATGCCATCCAC-3′ and reverse 5′-TCCACCACCCTGTTGCTGTA-3′. The relative expression of miR-338-3p or MACC1 was normalized to U6 small nuclear RNA or GAPDH, respectively and calculated using the 2−ΔΔCq method (22 ).
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5

Gene Expression Analysis by RT-qPCR

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Total RNA extraction was performed by using TRIzol (#15596026, Thermo Fischer Scientific) or by using a Maxwell RSC instrument (#AS1340, RSC simplyRNA Tissue, Promega, Madison, WI, USA). Reverse transcription of total RNA (1 µg) was carried out using the MMLV-RT kit (#M3683, Promega) with random hexamers. Real-time quantitative PCR (RT-qPCR) was subsequently performed with a 1:10 dilution of reverse-transcribed cDNA using a CFX384 Touch™ Real-Time PCR Detection System (Bio-Rad, Hercules, CA, USA). RT-qPCR TagMan Universal Master Mix II (#4440038, Thermo Fischer Scientific) was employed, with TagMan probes specific for HOTAIRM1- (exon 1-3, #Hs.PT.58.45434173, Integrated DNA Technologies (IDT), Coralville, IA, USA), TGM2 (#Hs.PT.58.23141755, IDT) or PGK1 (#Hs.PT.58 v.606641, IDT). RT-qPCR results were evaluated by 2−ΔΔCt method [27 (link)] using PGK1 expression levels as a housekeeping gene control.
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6

Quantifying miR-361-5p Expression

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Total RNA were extracted and reverse transcribed by using TRIZOL reagent (Invitrogen) and M-MLV RT kit (Promega). For detecting miR-361-5p, the Mir-VanaTM MiRNA Isolation Kit (Ambion, USA) was used to isolate total RNA from cell lines and patient samples following the manufacturer’s instructions. MiR-361-5p was detected using Platinum Taq DNA Polymerase (Invitrogen) with specific primers: miR-361-5p forward: ATAAAGRGCRGACAGTGCAGATAGTG, miR-361-5p reverse: TCAAGTACCCACAGTGCGGT, and U6 forward: CTCGCTTCGGCAGCACA, U6 reverse: AACGCTTCACGAATTTGCGT. Results were expressed as fold change using the 2-△△CT method.
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7

Quantitative RT-PCR Analysis of Stem Cell Markers

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RNA was isolated using the QIAGEN RNA isolation kit (RNeasy Mini Kit). Two micrograms of RNA was used for the reverse transcription reaction with the Promega M-MLV RT Kit. Twenty-five microliters of the reverse transcription mix was diluted 40 times, and 2 μl of this mix was used as a template for PCR. Quantitative real-time PCR with the intercalating dye SYBR Green was performed in triplicate on a 7500 Applied Biosystems and IQ-5 BioRad thermal cycler. The experiment was repeated 3 times. The RT-PCR primers used were as follows:
GAPDH-forward: TGTTGCCATCAATGACCCC TT; GAPDH-reverse: CTCCACGACGTACTCAGCG; TBX3-forward CTTACCAGCCACCATCCACC; TBX3- reverse: GATCAGTTTCACAAGCGGGG; KLF4-forward: CCCACATGAAGCGACTTCCC; KLF4-reverse: CAGGTCCAGGAGATCGTTGAA; NANOG-forward: TTTGTGGGCCTGAAGAAAACT; NANOG-reverse: AGGGCTGTCCTGAATAAGCAG.
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8

Quantitative Analysis of miRNA and EMT Markers

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Total RNA from tissues and cells were extracted using the TRIZOL reagent (Invitrogen) and reverse transcribed by using the M-MLV RT kit (Promega). For the detection of mature miR-338-3p, specific RT primers and PCR primers (Ribobio) were constructed, and cDNA was amplified using SYBR® Green PCR Master Mix (Toyobo, Osaka, Japan). The relative transcript levels of E-cadherin, N-cadherin, fibronectin, vimentin and ZEB2 were detected using SYBR® Green qPCR SuperMix (Invitrogen). The primers sequences are listed in the Supplementary Table 2. Relative expression was normalized to snRNA U6 or β-actin and calculated using the 2−ΔΔCt method.
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9

Real-time qPCR Analysis of Gene Expression

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The total RNA was extracted using TRIzol reagent (Shanghai Pufei Biotech) and reverse‐transcribed with M‐MLV RT kit (Promega) according to the manufacturer's instructions. PCR amplification was performed with SYBR Master Mixture (Takara) using LighterCycler 480 II System (Rcoche). The mRNA ratio of a target gene to GAPDH was calculated using the 2−ΔΔCt formula. The primers used were: GAPDH forward: 5′‐TGACTTCAACAGCGACACCCA‐3′; GAPDH reverse: 5′‐CACCCTGTTGCTGTAGCCAAA‐3′; GPR81 forward: 5′‐TTCGTATTTGGTGGCAGGCA‐3′; GPR81 reverse: 5′‐TTTCGAGGGGTCCAGGTACA‐3′; MGMT forward: 5’‐ACCGTTTGCGACTTGGTACTT‐3′; and MGMT reverse: 5’‐GGAGCTTTATTTCGTGCAGACC‐3′.
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10

Quantifying MEX3A mRNA Expression

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Total RNA of MNNG/HOS and U-2OS was extracted with Trizol Reagent (Invitrogen, USA) according to manufacturer’s protocol. The RNA was used as a template for the production of cDNA with M-MLV RT kit (Promega). To analyze the mRNA expression of MEX3A, qPCR was performed with SYBR Green master mix (TaKaRa, Japan) on a BioRad CFX96 sequence detection system (Bio Rad Company, Berkeley, CA). The qPCR was calculated with relative quantification (2−ΔΔCt) method, which was normalized to GAPDH.
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