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12 protocols using azd2014

1

Signal Pathway Protein Detection

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Western blots were performed as previously described [9 (link)]. Antibodies for AKT, GSK3, S6, 4EBP1, S6K1, GAPDH, vinculin, and STAT3 were purchased from Cell Signaling Technology. PRAS40 antibody was purchased from Invitrogen. BLNK antibody was purchased from BD Biosciences. GSK690693, MK2206, everolimus, rapamycin, PF-4708671, AT7867, GS-9973, and ibrutinib were purchased from Selleck. LY-333531 was purchased from Tocris. AZD2014, AZD5363, AZD1208, and C21H25ClN4O2 were synthesized by AstraZeneca.
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2

Melanoma Cell Line Characterization

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Cell line authentication and BRAF/NRAS mutation detection were previously described (8 (link)-10 (link)). Cells were grown in RPMI media in 5% fetal bovine serum. PGC1α promoter reporter was obtained from Addgene. MITF and TRPM1 promoter reporters were obtained from R. Haq (6 (link)). Selumetinib (AZD6244/ARRY142886), AZD8055 and AZD2014 were from AstraZeneca, PLX4720 was from Plexxikon, and other inhibitors were from SelleckChem. For in vitro treatments, the inhibitors were dissolved in DMSO.
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3

Squamous Cell Carcinoma Cell Lines and Inhibitor Treatments

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SCC4 and SCC25, derived from a squamous cell carcinoma of the tongue, were purchased from the American Type Culture Collection (Manassas, VA, USA) and maintained in DMEM/F12 containing 10% fetal bovine serum (FBS), 1% penicillin–streptomycin, and 2 mM l-glutamine. OML1 and OML1-R (radioresistant) cells were established by Hon-Yi Lin and Michael W.Y. Chan et al. and cultured in RPMI1640 containing 10% FBS, 1% penicillin–streptomycin, and 2 mM l-glutamine. All cells were maintained in 37°C under a humidified atmosphere of 5% CO2 with less than 4 months passage and checked for mycoplasma using kit (Lonza, Switzerland). BKM120 and BLY719 were provided by Novartis Pharmaceuticals Corporation (East Hanover, NJ, USA). AZD2014 was obtained from AstraZeneca (London, United Kingdom).
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4

AZD2014 Compound Preparation Protocol

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AZD2014 was obtained from AstraZeneca (London, United Kingdom), dissolved in DMSO at a concentration of 10 mM, and stored at −20°C until further use. The stock solution was diluted to the appropriate concentration in culture medium containing serum just before addition to cell cultures. All antibodies used in this work were obtained from Cell Signaling Technology (Beverly, MA, USA).
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5

Profiling Kinase Inhibitor Compounds

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Ponatinib was obtained by material transfer agreement from Ariad Pharmaceuticals, Inc. (Cambridge, Massachusetts). AZD4547 and AZD2014 were obtained by material transfer agreement from AstraZeneca (Alderley Park, UK). AZD8055, GSK690693 and MK2206 were purchased from Selleck Chemicals (Houston, TX). Stocks of the drugs were prepared in DMSO at concentrations such that the final concentration of DMSO was 0.1% v/v.
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6

Combination Therapy for Cancer Treatment

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Mice were randomly assigned to cohorts. Treatments were administered as follows: AZD2014 (AstraZeneca), in 20% w/v Captisol in H2O, at 15mg/kg by oral gavage (p.o.) daily; Gemcitabine (LC labs), in PBS, at 100mg/kg by intraperitoneal injection twice weekly; and AZD8186 (AstraZeneca), in 0.5% HPMC in H2O, at 50mg/kg p.o. twice daily.
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7

Generation and Validation of NF2-null MN Cell Lines

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Human cell lines included an NF2-null immortalized MN line Ben-Men-1, NF2 AC-CRISPR, and two independent human primary MN for which cell line establishment and growth conditions have been previously described (15 (link), 54 (link)). All primary cultures were collected following Massachusetts General Hospital Human Subjects protocols for tumor acquisition after informed consent. In addition, we generated an immortalized human MN line, MN1-LF from an independent NF2-null human primary MN cell line derived from a surgical resection. Immortalization methods and confirmation was carried out on a fee-for-service basis by Alstem, Inc. Briefly, 1 × 105 cells were transduced with lentivirus encoding SV40 large T antigen and a puromycin resistance gene. Cells were infected at a multiplicity of infection of 2. Following selection with 1.5 μg/ml puromycin for 3 days, cells underwent an additional three passages. PCR amplification of SV40 was performed to confirm immortalization followed by expansion and freezing of cells.
Reagents included exogenous heregulin/NRG1 (Sigma); inhibitor drugs lapatinib, erlotinib, INK128/TAK-228, and BMS-754807 (Selleck Chemicals); rapamycin (EMD Millipore); AZD2014 (obtained from AstraZeneca); and MM-121 (generously provided by Merrimack Pharmaceuticals). Drug treatment concentrations and times are described in the figure legends.
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8

Meningioma Cell Lines: Characterization and Inhibition

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Cell lines included immortalized NF2-deficient meningioma Ben-Men-1 [15 (link)], immortalized arachnoid AC007-hTERT derived from an NF2 patient expressing heterozygous level of NF2 [7 (link), 8 (link)], primary normal arachnoid AC028, and several primary NF2-deficient meningioma (MN) lines. Ben-Men-1 cells and AC007-hTERT were maintained under growth conditions described [7 (link), 15 (link)], and all primary lines were established and maintained as reported [8 (link)]. Low passage 293T cells for large-scale lentiviral packaging were obtained from TRC. Insulin was from Sigma (St. Louis, MO). Inhibitor reagents included rapamycin and AktVIII (EMD Millipore; Billerica, MA), AZD2014 (provided by AstraZeneca; Wilmington, DE), GSK650394 (Tocris; Minneapolis, MN), Torin1 (kindly provided by Dr. David Sabatini, Whitehead Institute/MIT, Cambridge, MA) and FRAX597 (generously given by Dr. Joseph Kissil, The Scripps Research Institute, Jupiter, FL). Inhibitor treatment times and concentrations are described in figure legends. All inhibitors were diluted as per manufacturer's recommendations.
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9

Compound Procurement and Preparation

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AZD2014, palbociclib, and fulvestrant were obtained from AstraZeneca compound collection. RAD001 was purchased from Selleckchem. Staurosporine was purchased from Sigma. AZD2014, palbociclib and fulvestrant were dissolved in DMSO to a concentration of 10 mmol/L and stored under nitrogen.
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10

Cell Culture and Compound Treatment Protocol

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Nthy-ori 3.1 cells were cultured in RPMI-1640 supplemented with 10% FBS, 1 X penicillin-streptomycin, and 1 X L-glutamine. XTC.UC1 cells (11 (link),12 (link)) were cultured in DME F12 medium supplemented with 10% FBS, 25 mM HEPES, 0.055 g/L sodium pyruvate, 0.365 g/L L-glutamine, 10 ug/ml insulin, 0.36 ng/ml hydrocortisone, 10 IU thyroid-stimulating hormone, and 1 X penicillin-streptomycin. Cells were maintained in a tissue culture incubator with 5% CO2 at 37°C. The following reagents were used: rapamycin (SelleckChem, Cat.# S1039), AZD8055 (SelleckChem, Cat.# S1555), AZD2014 (AstraZeneca), MK2206 (Merck), and PD325902 (Pfizer).
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