The largest database of trusted experimental protocols

5 protocols using fitc rat anti mouse cd45

1

Single-Cell Kidney Immune Cell Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Flow cytometry was performed as previously reported (7 (link)). Briefly, after perfusion of the kidneys with PBS, 1 kidney was removed, minced into fragments, and digested in RPMI 1640 containing 2 mg/ml collagenase type D and 100 μg/ml DNase I for 45 minutes at 37°C, with intermittent agitation. Kidney fragments were passed through a 40 μm mesh (Falcon; BD Biosciences), yielding single-cell suspensions. Cells were centrifuged (300g, 10 minutes, 4°C), resuspended in FACS buffer, kept on ice, and counted using a Bio-Rad TC20 automated cell counter. 105 cells were incubated in 2.5 μg/ml Fc blocking solution and stained for 60 minutes at 4°C with antibodies, including FITC rat anti-mouse CD45, APC anti-Ly6G, PE/Cy7 anti-mouse F4/80, Pacific Blue anti-mouse CD11b, APC anti-mouse CD11c, or isotype control (all BioLegend). Cells were then washed and stained for 15 minutes at room temperature with annexin V or H2DCFDA and resuspended in 1× annexin binding buffer (or PBS with 1% BSA for H2DCFDA). For cell cycle analysis, cells were stained with propidium iodide at 50 μg/ml. After immunostaining, cells were analyzed immediately on a Novocyte flow cytometer with NovoExpress Software (Acea Biosciences) for data acquisition, and data analysis was performed using FlowJo v10 software (Tree Star).
+ Open protocol
+ Expand
2

Tumor Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumors were harvested and digested with 20 ¼g/ml type II DNase I (Sigma, D4527) and 1 mg/mL collagenase IV (Worthington LS004186) to obtain single cell suspensions. Spleen and blood samples were processed with red blood cell lysis buffer (1 mM ammonium bicarbonate and 114 mM ammonium chloride). Antibodies (1:100 ratio) and Zombie Aqua™ live/dead dye (1:500 ratio) (Biolegend, 423102) were added to cell suspensions in PBS and incubated for 20 min on ice before flow analysis on BD FACS CantoB. Data were analyzed on FlowJo and represented as percentages of positive cells. Antibodies: FITC rat anti-mouse CD45 (Biolegend, 103108), APC rat anti-mouse CD3 (Biolegend, 100235), PE rat anti-mouse CD4 (Biolegend, 116005), and PE/Cyanine7 rat anti-mouse CD8a (Biolegend, 100721).
+ Open protocol
+ Expand
3

Inflammatory Signaling Pathway Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The kits for alanine aminotransferase (ALT), aspartate aminotransferase (AST), and triglyceride (TG) were supplied by Nanjing Jiancheng Bioengineering Institute (Nanjing, China). Enzyme-linked immunosorbent assay (ELISA) kits for TNF-α and IL-1β were purchased from Bender MedSystems (Vienna, Austria). PE rat anti-mouse Ly6G was obtained from BD Biosciences (New Jersey, USA). Neutrophils and F4/80 antibodies were obtained from Thermo Scientific (Rockford, IL, USA). Rabbit anti-mouse TLR4 antibody, rabbit anti-mouse phospho-IRAK1, phospho-p38, phosphor-IKKβ, IKKβ, phospho-IκBα, IκBα, phospho-p65, p38, p65, β-actin, Lamin B1, and GAPDH were purchased from Abcam (Cambridge, UK). PE rat anti-mouse F4/80, FITC rat anti-mouse CD11b, and FITC rat anti-mouse CD45 antibodies were from Biolegend, Inc. (San Diego, USA). TLR4-specific antagonist TAK-242 was from MedChemExpress LLC (Shanghai, China). Palmitic acid (PA) was from Sigma-Aldrich (St. Louis, USA).
+ Open protocol
+ Expand
4

Murine Lung Cell Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse lung was digested and single-cell suspensions were prepared as previously described (46 (link)). Cell suspensions underwent red blood cell lysis using Pharm Lyse buffer (BD Biosciences). Live/dead staining was performed in protein-free solution (HBSS) using fixable viability dye eFluor 506 (eBioscience), followed by incubation with FcR-blocking reagent (Miltenyi Biotec). Antibodies utilized for murine cell staining included rat anti–mouse CD45–FITC (BioLegend, 30-F11), rat anti–mouse Ly6C–eFluor450 (eBiosciences, HK1.4), rat anti–mouse I-A/I-E–PerCPCy5.5 (BioLegend, M5/114.15.2), rat anti–mouse CD45–APC (BioLegend, 30-F11), rat anti–mouse Ly6G–Alexa Fluor 700 (BioLegend, 1A8), rat anti–mouse NK1.1–Alexa Fluor 700 (BD, PK136), rat anti–mouse CD11b–APCCy7 (BioLegend, M1/70), rat anti–mouse CD64–PE (BioLegend, X54-5/7.1), rat anti–mouse SiglecF–PECF594 (BD, E50-2440), and rat anti–mouse CD11c–PECy7 (BD, HL3). For neutrophil quantification, 123Count eBeads (Invitrogen) were added. Flow analysis of fixed samples was done on a BD FACSymphony A5-Laser Analyzer at the Northwestern University Robert H. Lurie Comprehensive Cancer Center Flow Cytometry Core facility. Acquired data were analyzed with FlowJo v10.8 (FlowJo).
+ Open protocol
+ Expand
5

Isolation and Quantification of Neutrophils from Mouse Liver

Check if the same lab product or an alternative is used in the 5 most similar protocols
The identical liver lobe from different mice was collected, minced, and digested with 0.2% collagenase A for 1 hr at 37° with shaking, and the digested tissue was further dissociated into single-cell suspension by pipetting several times. Cells passed through 70-µm cell strainer were pelleted, resuspended in 1 ml phosphate-buffered saline (PBS) and overlayed onto 4 ml of 33% Percoll gradient. After centrifugation at RT for 15 min at 1400×g, cell pellet was collected as leukocytes which include polymorphonuclear (PMN) cells. Leukocytes were further treated with ACK Lysing Buffer for a short time to remove red blood cells and counted. The number of neutrophils was quantified by FACS after staining with rat anti-mouse Ly-6G-PE, Clone 1A8 (BioLegend), rat anti-mouse CD45-FITC (BioLegend), and rat anti-mouse CD11b-APC (BioLegend) for 15 min at 4°. Ly-6G high cells were counted as neutrophils.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!