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Rabbit anti arc

Manufactured by Synaptic Systems
Sourced in Germany

Rabbit anti-Arc is a primary antibody that recognizes the activity-regulated cytoskeleton-associated (Arc) protein. Arc is a key regulator of synaptic plasticity and is involved in various neuronal processes.

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10 protocols using rabbit anti arc

1

Immunostaining of Mouse Brain Sections

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Mice were administered ketamine and xylazine (100 mg/kg and 10 mg/kg, respectively) and euthanized by transcardial perfusion with 10 mL of PBS, followed by 10 mL of 4% paraformaldehyde in PBS. Brains were extracted and 100 μm coronal sections were cut on a vibratome. The tissue was labeled with the following antibodies: goat anti-GFP (Abcam ab6673), rabbit anti-arc (Synaptic Systems 156-003), goat anti-c-fos (Santa Cruz sc-52-G), alexa-488 donkey anti-goat (Jackson ImmunoResearch), alexa-568 donkey anti-rabbit (Life Technologies A11057), alexa-647 donkey anti-rabbit (Jackson ImmunoResearch 711-605-152) and alexa-568 donkey anti-goat (Life Technologies A10042). Slices were counterstained with neurotrace 640/660 or 435/455 (Life Technologies N21483 or N21479, respectively). Antibody amplification was not used to visualize eNpHR3.0-eYFP. All images were taken using a Zeiss LSM-710 confocal microscope system.
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2

Antibody detection and immunoprecipitation

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Primary antibodies are as follows: mouse anti-Arc (C-7) (Santa Cruz Biotechnology, Dallas, TX, Cat# sc-17839, RRID:AB_626696), rabbit anti-Arc (Synaptic Systems, Göttingen, Germany, Cat# 156 003, RRID:AB_887694), rabbit anti-GFP (Santa Cruz Biotechnology Cat# sc-8334, RRID:AB_641123), mouse anti-mCherry (Takara Bio, Siga, Japan, Cat# 632,543, RRID:AB_2307319), anti-ALFA HRP-coupled sdAb (NanoTag Biotechnologies, Cat#. N1501-HRP). Secondary antibodies are as follows: Goat Anti-Mouse IgG, H & L Chain Antibody, Peroxidase Conjugated (Merck, Darmstadt, Germany, Cat# 401,253, RRID:AB_437779) and Goat Anti-Rabbit IgG, H & L Chain Specific Peroxidase Conjugate antibody (Merck Cat# 401,315, RRID:AB_2617117). Secondary antibodies for detecting immunoprecipitated proteins are as follows: Peroxidase AffiniPure Goat Anti-Mouse IgG, light chain specific (Jackson ImmunoResearch Labs, West Grove, PA, Cat# 115–035-174, RRID:AB_2338512) and Peroxidase IgG Fraction Monoclonal Mouse Anti-Rabbit IgG, light chain specific (Jackson ImmunoResearch Labs, Cat# 211–032-171, RRID:AB_2339149).
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3

Immunohistochemistry of Neuronal Proteins

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The following antibodies were used: mouse anti-β-galactosidase (Promega, Mannheim, Germany), mouse anti-parvalbumin, rabbit anti-SK2 (Sigma-Aldrich, Munich, Germany), rabbit anti-GFAP (Dako, Glostrup, Denmark), rabbit anti-parvalbumin, mouse anti-GAD67 (Merck Millipore, Darmstadt, Germany), rabbit anti-Arc, rabbit anti-VGLUT2, rabbit anti-MAP2 [35 (link)] (Synaptic Systems, Göttingen, Germany), rabbit anti-Iba1 (Wako Chemicals GmbH, Neuss, Germany), rabbit anti-BDNF (Santa Cruz Biotechnology, Heidelberg, Germany), rabbit anti-BK (Alomone Labs, Jerusalem, Israel), rabbit anti-CtBP2/RIBEYE (Cell Applications, San Diego, CA, USA), and rabbit anti-KCNQ4 [36 (link)].
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4

Western Blotting of Synaptic Proteins

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Tissue homogenization and Western blotting experiments were performed exactly as described in (DaSilva et al., 2016 ; Eales et al., 2014 ; Wall et al., 2018 (link)). Membranes were probed with rabbit anti‐Arc (Synaptic Systems, 1:2500); rabbit anti‐glutamate receptor 1 (Millipore # AB1504, 1:1000), rabbit anti‐metabotropic glutamate receptor 5 (EMD Millipore # AB5675, 1:1000), rabbit anti‐beta tubulin antibody (abcam, ab6046, 1:1000) and mouse anti‐Glyceraldehyde 3‐phosphate dehydrogenase (GAPDH; abcam, ab8245, 1:5000) antibodies followed by goat anti‐Rabbit IgG‐HRP H + L (Cell Signaling, 1:10,000) and goat anti‐Mouse IgG HRP LC (Jackson ImmunoResearch, 1:20,000) secondary antibodies. Blots were imaged using the ChemiDoc™ MP Imaging System (Bio‐Rad).
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5

Immunoblotting Protocol for Synaptic Proteins

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Protein extracts were resolved by SDS-PAGE, transferred onto nitrocellulose membrane (BioTraceNT, PALL), immunoblotted with the following primary antibodies: mouse anti-FMRP18 (link) 1 µg/mL (DSHB, Clone 2F5-1); Rabbit anti-GluA1 C-terminal 1/1000 (Merk-Millipore #AB1504); Rabbit anti-GluA2 C-terminal 1/2000 (Synaptic System #182103); Rabbit anti-Homer1 1/1000 (Synaptic Systems #160003); Mouse anti-PSD95 1/10000 (NeuroMab #75-028 clone K28/43); Goat anti-GluN1 1/500 (Santa-Cruz #sc-1467); Mouse anti-Synapsin1a/b 1/500 (Santa-Cruz #sc-376623); Rabbit anti-GAD65/67 1/500 (Merk-Millipore #ABN904); Rabbit anti-CaMKII 1/500 (Santa-Cruz #sc-9035); Rabbit anti-Arc 1/1000 (Synaptic Systems #156003); Mouse anti-Gephyrin 1/1000 (Synaptic System #147111); Rabbit anti-vGluT1 1/5000 (Synaptic System #135303). Standard loading controls were included using a rabbit anti-GAPDH antibody 1/25000 (Sigma #G9545) or a rabbit anti-β3 Tubulin 1/25000 (Synaptic Systems #302302) as indicated. Proteins were revealed using the appropriate HRP-conjugated secondary antibodies (GE healthcare #NA931V and #NA934V). Proteins were then identified using Immobilon Western (Millipore) chemiluminescent solution and images acquired on a Fusion FX7 system (Vilber Lourmat). Full-size blots for cropped gels are shown in the Source data file.
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6

Neuronal Immunostaining Protocol

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After treatments, neurons were washed twice with 37°C 4% sucrose/1X phosphate-buffered-saline (PBS; 10X: 1.4 M NaCl, 26.8 mM KCl, 62 mM Na2HPO4, 35.3 mM KH2PO4, pH 7.4), then fixed for 15 min with 4% sucrose/4% formaldehyde (Thermo Fisher Scientific) in 1X PBS. Neurons were washed 3 × 5 min with 1X PBS, permeabilized for 10 min with 0.2% Triton X-100 (Amresco, Solon, OH) in 1X PBS, and blocked for 30 min in 5% normal donkey serum (Jackson ImmunoResearch, West Grove, PA) in 1X PBS. Neurons were then incubated in primary antibody diluted in block for 1 h at RT, washed 3 × 5 min in 1X PBS, and incubated in secondary antibody diluted in block for 1 h at RT. Neurons on coverslips were mounted on glass slides in Fluoromount (Thermo Fisher Scientific) and dried overnight at RT. Primary antibodies used were: rabbit anti-Arc (1:1000; custom-made; ProteinTech, Rosemont, IL); rabbit anti-Arc (1:1000; Synaptic Systems, Goettingen, Germany); chicken anti-MAP2 (1:5000; ab5392; Abcam); mouse anti-Rab5 (1:1000; BD Biosciences, San Jose, CA); DAPI nuclear stain (Molecular Probes, Thermo Fisher Scientific). Secondary antibodies used were: Alexa Fluor 405, 488, 555, or 647 for the appropriate animal host (1:750; Thermo Fisher Scientific or Jackson ImmunoResearch).
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7

Immunohistochemical Analysis of Arc, GFP, and c-Fos

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Ninety minutes after the CFC test, mice were deeply anesthetized with ketamine/xylazine (150/15 mg/kg) and transcardially perfused with 1× phosphate buffered saline (PBS), followed by 4% paraformaldehyde (PFA) in 1× PBS. Brains were extracted and post-fixed overnight at 4°C in 4% PFA and then transferred to a 30% sucrose in 1× PBS at 4°C for two days. Thirty-five μm coronal sections were collected on a cryostat and stored in cryoprotectant at −20°C.
For immunohistochemistry, sections were washed in 1× PBS and blocked at room temperature (RT) for 2 h in 10% normal donkey serum (NDS) in 1× PBS with 0.5% Triton-X (PBS-T). Sections were incubated with primary antibodies (1:2,000 rabbit anti-Arc (Synaptic Systems); 1:500 chicken anti-GFP (Abcam); 1:1000 rabbit anti-c-Fos (Millipore)) diluted in 5% NDS in 1× PBS-T overnight at 4°C. Sections were rinsed in 1× PBS-T and incubated in secondary antibodies (Jackson ImmunoResearch; 1:500 donkey anti-rabbit Cy3; 1:500 biotinylated donkey anti-chicken) in 1× PBS-T for 2 h at RT. Sections were rinsed in 1× PBS-T and incubated in tertiary antibody (1:250 avidin Cy-2 (Jackson ImmunoResearch)) and 1:1000 DAPI for 1 h at RT. Sections were washed in 1× PBS, mounted onto slides, and coverslipped with ProLong Gold (Invitrogen). See the Life Sciences Reporting Summary for additional information.
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8

Immunohistochemical Analysis of Arc, GFP, and c-Fos

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Ninety minutes after the CFC test, mice were deeply anesthetized with ketamine/xylazine (150/15 mg/kg) and transcardially perfused with 1× phosphate buffered saline (PBS), followed by 4% paraformaldehyde (PFA) in 1× PBS. Brains were extracted and post-fixed overnight at 4°C in 4% PFA and then transferred to a 30% sucrose in 1× PBS at 4°C for two days. Thirty-five μm coronal sections were collected on a cryostat and stored in cryoprotectant at −20°C.
For immunohistochemistry, sections were washed in 1× PBS and blocked at room temperature (RT) for 2 h in 10% normal donkey serum (NDS) in 1× PBS with 0.5% Triton-X (PBS-T). Sections were incubated with primary antibodies (1:2,000 rabbit anti-Arc (Synaptic Systems); 1:500 chicken anti-GFP (Abcam); 1:1000 rabbit anti-c-Fos (Millipore)) diluted in 5% NDS in 1× PBS-T overnight at 4°C. Sections were rinsed in 1× PBS-T and incubated in secondary antibodies (Jackson ImmunoResearch; 1:500 donkey anti-rabbit Cy3; 1:500 biotinylated donkey anti-chicken) in 1× PBS-T for 2 h at RT. Sections were rinsed in 1× PBS-T and incubated in tertiary antibody (1:250 avidin Cy-2 (Jackson ImmunoResearch)) and 1:1000 DAPI for 1 h at RT. Sections were washed in 1× PBS, mounted onto slides, and coverslipped with ProLong Gold (Invitrogen). See the Life Sciences Reporting Summary for additional information.
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9

Immunostaining of Mouse Brain Sections

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Mice were administered ketamine and xylazine (100 mg/kg and 10 mg/kg, respectively) and euthanized by transcardial perfusion with 10 mL of PBS, followed by 10 mL of 4% paraformaldehyde in PBS. Brains were extracted and 100 μm coronal sections were cut on a vibratome. The tissue was labeled with the following antibodies: goat anti-GFP (Abcam ab6673), rabbit anti-arc (Synaptic Systems 156-003), goat anti-c-fos (Santa Cruz sc-52-G), alexa-488 donkey anti-goat (Jackson ImmunoResearch), alexa-568 donkey anti-rabbit (Life Technologies A11057), alexa-647 donkey anti-rabbit (Jackson ImmunoResearch 711-605-152) and alexa-568 donkey anti-goat (Life Technologies A10042). Slices were counterstained with neurotrace 640/660 or 435/455 (Life Technologies N21483 or N21479, respectively). Antibody amplification was not used to visualize eNpHR3.0-eYFP. All images were taken using a Zeiss LSM-710 confocal microscope system.
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10

Western Blotting of Synaptic Proteins

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Protein extracts were resolved by SDS-PAGE, transferred onto nitrocellulose membrane (BioTraceNT, PALL), immunoblotted with the following primary antibodies: mouse anti-FMRP 18 ; Rabbit anti-GluA1 C-terminal 1/1000 (Merk-Millipore); Rabbit anti-GluA2 C-terminal 1/2000 (Synaptic System); Rabbit anti-Homer1 1/1000 (Synaptic Systems); Mouse anti-PSD95 1/10000 (NeuroMab); Goat anti-GluN1 1/500 (Santa-Cruz); Mouse anti-Synapsin1a/b 1/500 (Santa-Cruz); Rabbit anti-GAD65/67 1/500 (Merk-Millipore); Rabbit anti-CaMKII 1/500 (Santa-Cruz); Rabbit anti-Arc 1/1000 (Synaptic Systems); Mouse anti-Gephyrin 1/1000 (Synaptic System); Rabbit anti-vGluT1 1/5000 (Synaptic System). Standard loading controls were included using a rabbit anti-GAPDH antibody 1/25000 (Sigma) or a rabbit anti-b3 Tubulin 1/25000 (Synaptic Systems) as indicated.
Proteins were revealed using the appropriate HRP-conjugated secondary antibodies (GE healthcare). Proteins were then identified using Immobilon Western (Millipore) chemiluminescent solution and images acquired on a Fusion FX7 system (Vilber Lourmat). Full-size blots for cropped gels are shown in Supplementary figure 7.
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