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4 protocols using cell strainer 70 m nylon

1

Cytokine and Chemokine Analysis of PD-L1-Targeted NIR-PIT

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Tumor inoculation and the treatment were performed as described earlier. Sera were serially collected from the mice before, and at 6 and 24 hours after PD-L1-targeted NIR-PIT on MC38-luc tumors. Tumors were harvested and homogenized in 1 mL PBS supplemented with protease inhibitors (cOmplete Tablets; Sigma-Aldrich, St. Louis, Missouri, USA); then, the solution was passed through a filter (Cell Strainer 70 µm Nylon; Corning, Corning, New York, USA). Concentrations of various cytokines and chemokines in the samples were analyzed with Mouse Cytokine Array/Chemokine Array from Eve Technologies (Calgary, Canada).
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2

Tumor and Spleen Sample Preparation

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Tumors and spleens were removed with scissors or forceps and weighted. Tumors were chopped into fine pieces and transferred into RPMI media (5% FBS + 10 mM HEPES) containing collagenase (0.2 mg/mL) (Clostridium histolyticum, Sigma) and spleens were suspended in PBS. Tumors were shaken gently at 37 °C for 30 min prior to tissue disruption. Spleen and tumor tissues were disrupted using a cell strainer (70 µm nylon) (Corning) using a syringe plunge. Nylon mesh was rinsed several times with media. Samples were spin (5 min at 1500 rpm) and re-suspended in 1 mL RBC lysis buffer (Sigma) for 5 min and washed 2× with flow buffer (Thermo Fisher). Cells were counted (Nexelom Cellometer), prior to live/dead staining with Zombie UV (Biolegend), incubated for 15 min at room temperature and washed 2× with PBS. This was followed by Fc block (CD16/CD32, BD Biosciences), antibody staining and preparation of single-color compensation controls (Ultra Comp eBeads compensation beads, Thermo Fisher). Samples were covered in foil and kept at 4 °C overnight. Intracellular staining was performed using Permeabilization Buffer (eBioscience) in conjunction with Foxp3/Transcription Factor Staining Buffer set (eBioscience). Fluorescence minus one (FMO) controls were used where indicated to distinguish between positively and negatively stained cells for FoxP3, Ly6G, and Ly6C.
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3

Multiparameter Flow Cytometry Analysis

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Single-cell suspensions were created by excising and cutting mouse tissues into 2-3 mm pieces. Tumor and spleen were mechanically disrupted and directly passed through a 70-µm nylon cell strainer (Corning). Cells were then washed with ow running buffer (0.1% BSA in PBS) and incubated with Zombie NIR™ (Biolegend, 1:100) at room temperature for 20 minutes, which were used to gate out dead cells. Cells were then stained with the following extracellular antibodies: anti-mouse CD3 FITC, antimouse CD8a APC, anti-mouse CD4 PerCP/Cy5.5, anti-mouse CD 279 (PD-1) Brilliant Violet 421™, or antimouse CD45 Brilliant Violet 510™ all purchased from Biolegend. For intracellular staining, cells were surface-stained as above, then xed and permeabilized using the FoxP3/Transcription Factor Staining Buffer Set (eBiosciences) as per the manufacturer's protocol. Cells were then stained with anti-mouse FoxP3 PE or anti-mouse IFNr Brilliant Violet 510™ from Biolegend. All data were collected on a ow cytometer (BD Biosciences, Canto II) and analyzed with FlowJo v10 software (Tree Star, Inc.).
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4

Ileal Content Extraction Protocol

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Frozen ileal content was dissolved in distilled water at a concentration of 100 mg/1.5 mL. After vigorous mixing in a TissueLyzer (Qiagen, Hilden, Germany) for 10 min, the resultant slurries were centrifuged at 13 krpm for 10 min at 4 °C. Supernatants were filtered through a 70 µm nylon cell strainer (Falcon Corning, Glendale, AZ, USA), pooled for RYGB-operated and sham-operated groups, and stored in aliquots at −20 °C.
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