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6 protocols using rabbit anti survivin

1

Western Blot Analysis of Podocyte Proteins

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Podocytes were lysed with a RIPA buffer containing protein inhibitors (1 mM phenylmethylsulfonyl fluoride, 1 μg/mL leupeptin and pepstatin). Thirty micrograms of the total protein were subjected to 8%–15% SDS-PAGE and transferred to nitrocellulose membranes (Amersham biosciences, Piscataway, NJ, USA). After blocking with PBS containing 5% nonfat dry milk for 1 h at room temperature, then incubated overnight at 4 °C with the following primary antibodies, rabbit anti-survivin (1:2000, Abcam, Cambridge, MA, USA), rabbit Anti-cleaved caspase 3 (1:750, Cell Signaling Technology, Beverly, MA, USA) and mouse Anti-GAPDH (1:5000, Chemicon, Temecula, CA, USA) antibody at 4 °C over night (14–16 h). Subsequently, the membranes were rinsed three times, each time for 10 min in PBS buffer with 0.05% Tween-20 and incubated with horseradish peroxidase-conjugated anti-rabbit or mouse IgG (Santa Cruz Biotechnology, Santa Cruz, CA, USA). After a final washing, the membranes were developed using an enhanced chemiluminescence reagent (Millipore, Bedford, MA, USA), and the specific protein bands were scanned and quantitated in relation to GAPDH. The densitometric analysis of images was performed using Image J software (National Institute of Mental Health, Bethesda, MD, USA).
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2

Polydatin Modulates Apoptosis Pathways

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Cells (HepG2 and SMMC-7721) treated with polydatin (1, 3, 10, 30, and 100 µM) for 48 h were lysed for 30 min in cold lysis buffer. After centrifugation at 12,000 g for 5 min at 4°C, the supernatant was collected as the total cellular protein extracts. Protein samples were separated on the 10% SDS-PAGE, and then transferred onto a polyvinylidene difluoride membrane. Membranes were incubated with 5% skimmed milk in TBST at room temperature for 1 h. Then, the membranes were incubated with rabbit anit-caspase-3 (1:1500), rabbit anti-caspase-9 (1:1500), rabbit anti-Bax (1:2000), rabbit anti-Bcl-2 (1:1000), rabbit anti-DKK-1 (1:1500), rabbit anti-beta-catenin (1:2000), rabbit anti-c-myc (1:1000), rabbit anti-cyclin D1 (1:2500), rabbit anti-survivin (1:1000), and rabbit anti-GAPDH antibodies (1:3000) (all from Abcam) overnight at 4°C, and washed three times with TBST. Then, the membranes were further incubated with appropriate HRP-linked secondary antibodies. The bands of specific proteins were visualized by western blotting Luminal Reagent (Thermo Fisher Scientific) according to manufacturer instructions.
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3

Immunohistochemical and Western Blot Analysis of Cell Signaling Proteins

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The primary antibodies used in the current study were as follows: Rabbit anti-Rab31 [1:200 for immunohistochemistry (IHC) and immunofluorescence (IF); cat. no. ab230881; Abcam], rabbit anti-Ki-67 (1:200 for IHC; cat. no. ab15580; Abcam), rabbit anti-Survivin [1:200 for IHC, 1:1,000 for western blotting (WB); cat. no. 2808], rabbit anti-cyclin D1 (1:1,000 for WB; cat. no. 2978), rabbit anti-B-cell lymphoma 2 (Bcl2; 1:1,000 for WB; cat. no. 2978), rabbit anti-E-cadherin (1:200 for IHC, 1:1,000 for WB; cat. no. 3195) and rabbit anti-N-cadherin (1:200 for IHC, 1:1,000 for WB; cat. no. 3116) (all from Cell Signaling Technology, Inc.).
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4

Podocyte Immunofluorescence Staining

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On the coverslip’s podocytes were fixed with 4% paraformaldehyde, followed by permeabilization and blocking with 0.3% Triton X-100 and 10% goat serum. Rabbit anti-survivin (1:200, Abcam) was used as the primary antibody. For F-actin staining, fixed and permeabilized cells were incubated with Alexa-phalloidin (1:200, Invitrogen). After three washes with PBS, the slides were incubated with Alexa Fluor® 488 Goat Anti-Rabbit IgG (1:200, Invitrogen). Hoechst nuclear dye was applied. The slides were mounted with 15% Mowiol (Sigma). Stained images for each antibody at the same light exposure were obtained by confocal laser-scanning microscopy (Zeiss Lsm510 Meta, Jena, Germany). Photographs of podocytes stained with each antibody were selected randomly and analyzed by a person who was blinded to the study groups.
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5

Cisplatin-Induced Apoptosis Pathway

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Cisplatin (CDDP) was purchased from Sigma‐Aldrich (St Louis, MO, USA). JNK inhibitor SP600125">SP600125 was purchased from Sigma‐Aldrich and dissolved in DMSO. Antibodies used for western blotting were rabbit anti–ANXA3 (Saierbio, Tianjing, China), rabbit anti–phospho‐JNK (Cell Signaling Technology), rabbit anti–survivin (Abcam, Cambridge, MA, USA), mouse anti–caspase 8 (Cell Signaling Technology), rabbit anti–caspase 3 (Cell Signaling Technology) and mouse anti–β‐actin (Sigma‐Aldrich). The secondary antibodies coupled to HRP were purchased from ZSGB‐BIO (Beijing, China). Recombinant Human ANXA3 was purchased from R&D (Minneapolis, MN, USA). ANXA3 neutralizing antibody was purchased from Sigma‐Aldrich.
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6

Immunofluorescence Analysis of Mitotic Spindle Proteins

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Cells were fixed with 3.7% paraformaldehyde (PFA) for 20 min at room temperature and washed with PBS, and the PFA was quenched with 1 mM NH4Cl for 30 min. Cells were incubated with antibodies or dyes diluted in PBS–10% horse serum–0.1% saponin for 1 h. The primary antibodies used were mouse anti-α-tubulin (Sigma), mouse anti-MPM-2 (Millipore), mouse anti-Incenp (Abcam), mouse anti-Aurora B (BD), rabbit anti-Survivin (Abcam), rabbit anti-kinesin-like protein 1 (anti-MKLP-1) (SC867) (Santa Cruz), and mouse anti-γ-tubulin (Sigma), and the dyes used were wheat germ agglutinin (WGA) (Invitrogen) and DRAQ5 (Biostatus). Coverslips were mounted using Aqua PolyMount (Polysciences Inc.). The total fluorescence signal (integrated density) of Incenp, Survivin, Aurora B, and MKLP-1 divided by the area of each individual cell was quantified using ImageJ. Samples were all imaged using a confocal laser scanning microscope (LSM510 or LSM710; Zeiss) with 405-, 488-, and 633-nm-wavelength excitation lasers and a 63× Plan-Apochromat 1.40-numerical-aperture (NA) 190-mm-working-distance (WD) oil or a 40× C-Apochromat 1.2-NA 280-mm-WD Water objective.
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