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Sodium pyruvate

Manufactured by Corning
Sourced in United States

Sodium pyruvate is a chemical compound commonly used as a cell culture supplement in laboratory settings. It serves as an essential metabolic intermediate, providing energy and supporting cellular growth and development. Sodium pyruvate is a stable, white crystalline powder that is soluble in water and commonly used in various cell culture applications.

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327 protocols using sodium pyruvate

1

Cell Culture Protocols for Immune Cells

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Vero and A549 cells were obtained from ATCC and maintained in complete DMEM (DMEM medium [Corning] supplemented with 10% fetal bovine serum [Optima, Atlanta Biologics], 2mM L-Glutamine [Corning], 1mM HEPES [Corning], 1mM sodium pyruvate [Corning], 1x MEM Non-essential Amino Acids [Corning], and 1x Antibiotics/Antimycotics [Corning]). moDCs, monocytes, mDCs and pDCs were maintained in complete RPMI (RPMI 1640 medium [Corning] supplemented with 10% fetal bovine serum [Optima, Atlanta Biologics], 2mM L-Glutamine [Corning], 1mM sodium pyruvate [Corning], 1x MEM Non-essential Amino Acids [Corning], and 1x Antibiotics/Antimycotics [Corning]).
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2

Cultivation of Pancreatic Cell Lines

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INS-1 cells were cultured in RPMI 1640 (Corning, NY, USA) supplemented with 10% FBS (Atlanta Biologicals, Norcross, GA), HEPES (10 mM, Life Technologies, CA, USA), sodium pyruvate (1 mM, Corning), 2-mercaptoethanol (50 µM, Sigma, St Louis, MO, USA) and antibiotics (100 UI/mL penicillin and 100 µg/mL streptomycin, Corning). βTC6 cells were cultured in DMEM (Corning) with 15% FBS, sodium pyruvate (1 mM, Corning), non-essential amino acids (1 mM, Thermo, IL, USA), GlutaMAX (1 mM, Life Technologies) and antibiotics (100 UI/mL penicillin and 100 µg/mL streptomycin). Human islets were obtained from the Integrated Islet Distribution Program (Duarte, CA) in accordance with Oklahoma Medical Research Foundation’s internal review board (IRB) and ethical guidelines for the use of human tissue. Standard viability was 80–90% and purity was >80%. Islets were maintained in CMRL medium (Life Technologies) supplemented with 10% FBS. All cells were grown at 37 °C in a humidified 5% CO2 atmosphere.
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3

CRISPR Editing in HEK-293T, Hep3B, and U87 Cells

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HEK-293T cells were cultured in Dulbecco′s Modified Eagle′s Medium without sodium pyruvate (Corning Incorporated). Hep3B cells were cultured in Eagle′s Minimum Essential Medium with sodium pyruvate (Corning Incorporated). U87 cells were cultured in Dulbecco′s Modified Eagle′s Medium with sodium pyruvate, high glucose (Thermo Fisher Scientific). All medium supplement with 10% FBS, and all cell lines used in this study are from the American Type Culture Collection (ATCC) and are maintained at 37 °C with 5% CO2. After overnight incubation (approximate 60~70% confluence), cells seeded on 24-well plates at an initial density of 100,000~150,000 cells per well were treated with either Cpf1 expression plasmid (provided by Dr. Feng Zhang) or Cpf1 mRNA (500 ng for DNMT1-3 and AAVS1 locus, and 1500 ng for FANCF-2 locus). At the same time, crRNAs (38 pmol for DNMT1-3 and AAVS1 locus, and 114 pmol for FANCF-2 locus) were added to each well. All components were formulated with Lipofectamine 3000 (Life Technologies) in Opti-MEM I reduced serum medium (Life Technologies) following the manufacturer’s recommended protocol.
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4

CRISPR Editing in HEK-293T, Hep3B, and U87 Cells

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HEK-293T cells were cultured in Dulbecco′s Modified Eagle′s Medium without sodium pyruvate (Corning Incorporated). Hep3B cells were cultured in Eagle′s Minimum Essential Medium with sodium pyruvate (Corning Incorporated). U87 cells were cultured in Dulbecco′s Modified Eagle′s Medium with sodium pyruvate, high glucose (Thermo Fisher Scientific). All medium supplement with 10% FBS, and all cell lines used in this study are from the American Type Culture Collection (ATCC) and are maintained at 37 °C with 5% CO2. After overnight incubation (approximate 60~70% confluence), cells seeded on 24-well plates at an initial density of 100,000~150,000 cells per well were treated with either Cpf1 expression plasmid (provided by Dr. Feng Zhang) or Cpf1 mRNA (500 ng for DNMT1-3 and AAVS1 locus, and 1500 ng for FANCF-2 locus). At the same time, crRNAs (38 pmol for DNMT1-3 and AAVS1 locus, and 114 pmol for FANCF-2 locus) were added to each well. All components were formulated with Lipofectamine 3000 (Life Technologies) in Opti-MEM I reduced serum medium (Life Technologies) following the manufacturer’s recommended protocol.
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5

Culture conditions for INS-1 and βTC6 cells

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INS-1 cells were cultured in RPMI 1640 (Corning, NY, USA) supplemented with 10% FBS (Atlanta Biologicals, Norcross, GA), HEPES (10 mM, Life Technologies, CA, USA), sodium pyruvate (1 mM, Corning), 2-mercaptoethanol (50 µM, Sigma, St Louis, MO, USA) and antibiotics (100 UI/mL penicillin and 100 µg/mL streptomycin, Corning). βTC6 cells were cultured in DMEM (Corning) with 15% FBS, sodium pyruvate (1 mM, Corning), non-essential amino acids (1 mM, Thermo, IL, USA), GlutaMAX (1 mM, Life Technologies) and antibiotics (100 UI/mL penicillin and 100 µg/mL streptomycin). All cells were grown at 37 °C in a humidified 5% CO2 atmosphere.
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6

Cell Culture Protocols for Human Cell Lines

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Human embryonic kidney 293 T cells (GenHunter Co., Nashville, TN, USA) were maintained in Dulbecco’s Modified Eagle’s Medium (Corning Life Sciences, Manassas, VA, USA) supplemented with 1.0 g/L glucose, 4 mM L-glutamine (Sigma-Aldrich, St. Louis, MO, USA), 1.0 mM sodium pyruvate (Corning Life Sciences), 100 IU/mL penicillin (Sigma-Aldrich), 0.1 mg/mL streptomycin (Sigma-Aldrich), 10 mM HEPES (HyClone, South Logan, UT, USA), and 10% fetal bovine serum (FBS) (HyClone). The human neuroblastoma cell line HTB-11 (ATCC, Manassas, VA, USA), was cultured in Minimum Essential Medium (Eagle) (Corning Life Sciences) supplemented with 2 mM L-glutamine, 1.0 mM sodium pyruvate, 100 IU/mL penicillin, 0.1 mg/mL streptomycin, and 10% FBS. Culture media was replaced every 2 to 3 days and cells were sub-cultured with EDTA solution containing 0.25% trypsin (Sigma-Aldrich). The human monocytic cell line U937 (ATCC) was cultured in RPMI 1640 (Sigma-Aldrich) supplemented with 2 mM L-glutamine, 1.0 mM sodium pyruvate, 100 IU/mL penicillin, 0.1 mg/mL streptomycin, and 10% FBS. Cells were maintained at 37°C in 5% CO2.
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7

CRISPR Knockout of CBX8 and EZH2 in GBM Cells

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HEK293T cells were cultured in Dubecco's Modified Essential Media (DMEM), 10% fetal bovine serum (FBS, JR Scientific), 1% glutagro (Corning), 1% penicillin/streptomycin (Corning), 1% sodium pyruvate (Corning). GBM T98G cells were cultured in Eagle's Modified Essential Media, 10% FBS, 1% non-essential amino acids (Corning), 1% glutagro (Corning), 1% penicillin/streptomycin (Corning) and 1% sodium pyruvate (Corning). Hs68 cells were cultured in Dubecco's Modified Essential Media, 10% fetal bovine serum (JR Scientific), 1% penicillin/streptomycin (Corning) and 1% glutagro (Corning). All cells were grown at 37°C and 5% CO2. For generation of CBX8 and control CRISPR knockout lines, 200 000 T98G cells were plated in six-well 24 h prior to transfection. The respective vector (3.3 μg) was co-transfected with 13 μl of Fugene 6 (Promega). Media was changed 24 h post-transfection. Transfected cells underwent puromycin selection (2 μg/ml) for 3 days, 48 h post-transfection. EZH2 knockout lines were transduced with the MSCV_Cas9_puro vector (a gift from Chris Vakoc, Addgene plasmid #65655) (28 (link)) followed by the guide RNA vector.
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8

Culturing Primary Human and Mouse T Cells

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Primary human CD4 T cells were obtained from the University of Pennsylvania’s Human Immunology Core. Human CD4 T cells were maintained in RPMI (Gibco) with 10% FBS (Benchmark), 100 U/ml Penicillin-Streptomycin (Gibco), and 2 mM L-glutamine (Gibco). Mouse cells were maintained in Click's media (Irvine Scientific) with 10% FBS, 100 U/ml Penicillin-Streptomycin, 2 mM L-glutamine, 1 mM sodium pyruvate (Cellgro), 1x MEM-NEAA (Gibco) and 50 μM 2-mercaptoethanol (BioRad).
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9

Anaplastic Thyroid Cancer Cell Lines

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THJ-11T (KRAS, TP53, TERT), THJ-16T (PI3KCA, TP53, TERT), THJ-21T (BRAF, TP53, TERT) and THJ-29T (APC, TP53, TERT) ATC cell lines were originated in our laboratory (Marlow et al. 2010 (link)) and were short-tandem repeat (STR) verified and validated to the respective patient’s ATC tissue. The APC mutation for THJ-29T was identified by Drs. James Fagin and Jeffrey Knauf as well as validating the other mutations (personal communication). Thyroid cells were maintained in RPMI 1640 medium (Cellgro, Manassas, VA) supplemented with 5% fetal bovine serum (Hyclone, Logan, UT), non–essential amino acids (Cellgro), sodium pyruvate (Cellgro), HEPES (Cellgro) and penicillin-streptomycin-amphotericin B (Cellgro) at 37°C in a humidified atmosphere with 5% CO2. 293FT cells were purchased from (Invitrogen, Carlsbad, CA) and were maintained in DMEM as per the manufacturer’s protocol along with 500 μg/ml neomycin (MP Biomedical, Solon, OH).
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10

Dendritic Cell Generation from Murine Bone Marrow

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DCs were generated from murine bone marrow cells, as described by Garrigan et al23 (link) with minor modifications. Briefly, bone marrow was flushed from the long bones of C57BL/6 mice. A single cell suspension was cultured in RPMI 1640 (CellGro, USA) supplemented with 10% heat-inactivated FBS (Life Technologies, USA), 2 mM L-glutamine (Gibco, USA), 100 U/mL penicillin (Gibco, USA), 100 µg/mL streptomycin (Gibco, USA), 10 mM HEPES pH 7.4 (Gibco, USA), 0.5 mM sodium pyruvate (Cellgro, USA), 0.5% MEM non-essential amino acids (Cellgro, USA), 0.1 mg/mL Normocin (InVivogen, USA), along with 20 ng/mL GM-CSF (Peprotech) and 10 ng/mL IL-4 (Peprotech, USA) for 4-DCs or 20 ng/mL GM-CSF and 250 U/mL IFNα (AbD Serotec, USA) for α-DCs. On day 2, the medium was replaced with fresh medium containing the respective cytokines. On day 4, 100 µL of the indicated tumor lysate preparations were added to 10 mL culture (~1 tumor cell equivalent per DC) and incubated overnight at 37°C and 5% CO2. Unpulsed DCs were also cultured as negative controls. On day 5, the medium was removed and fresh medium containing 100 ng/mL LPS (Sigma-Aldrich, Germany) and 100 ng/mL IFNγ (Peprotech, USA) was added. DCs were then cultured overnight at 37°C and 5% CO2.
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