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20 protocols using ab42824

1

Cofilin and PSD-95 Immunolabeling in Rat Brain

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Rats were given halothane to be anesthetized and then perfused with 4% paraformaldehyde in 0.1 M sodium phosphate buffer (PB), pH 7.2. Brains were postfixed for 2 h, cryoprotected in 20% sucrose/PB, and then sectioned (25μm) on a freezing microtome. The position of the slices was based on Bregma 2.76mm. Free-floating sections were processed for double-immuno-labeling that rabbit anti-Cofilin (1:100, ab-42824, Abcam) or anti-pCofilin [pS3] IgG (1:100, ab-12866, Abcam), and mouse anti-PSD-95 (1:200, MA1-045, Thermo Fisher Scientific) were used as the first antisera, and Alexa Fluor 555 anti-rabbit IgG and Alexa Fluor 488 anti-mouse IgG (both 1:200; Invitrogen, Carlsbad, CA) in PB as the secondary antisera. Control tissue was processed by the same procedures but without the first antisera. Immunocytochemistry for pCofilin and PSD-95 was examined to three batches of tissue, and each batch was simultaneously processed, and each group contained 2-4 samples. All the groups N, S, C, non-TTI, and TTI contributed their samples to test. Every batch contained tissue from the group C, and quantification of immunoreactive puncta within a batch was normalized to the mean value of the group C for that batch.
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2

Western Blot Analysis of RSV Infection

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Western blot was performed as previously described (15 (link)). Briefly, the protein concentrations of the RSV infection serum samples (15 patients with acute- and convalescence-phase RSV infection, 15 control) and mouse lung homogenates (10 mice with acute- and convalescence-phase RSV infection, 10 control) were determined using a BCA kit (Beyotime Biotechnology, China). Protein samples (20 µg) were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis at constant voltage in Tris-glycine buffer, and then transferred onto polyvinylidene difluoride membranes at constant current. The membranes were washed thrice in Tris-buffered saline containing 0.1% TWEEN 20 (TBST), blocked with 10% bovine serum albumin for 1 h at room temperature, and incubated with primary antibodies against triosephosphate isomerase 1 (TPI1; ab28760, Abcam, USA), peroxiredoxin 2 (PRDX2; ab109367, Abcam), bisphosphoglycerate mutase (BPGM; ab97497, Abcam), and cofilin 1 (CFL1; ab42824, Abcam) at 4°C overnight. The next day, membranes were washed three times in TBST and incubated with secondary antibody for 1 h at room temperature. After three washes in TBST, protein signals were visualized with ECL (Beyotime Biotechnology, China) and exposed to X-ray film. The band intensities were quantitated using ImageJ software (Version 2.0; NIH, USA) and normalized to GAPDH.
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3

Cofilin 1 Expression in Bladder Cancer

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Cofilin 1 protein expression in bladder cancer tissues and corresponding paracancerous tissues was evaluated by IHC with the 3′, 3′-diaminobenzidine (DAB) kit (ZLI-9017, ZSGB-Bio, Beijing, China), which was performed according to the manufacturer's protocol. Cofilin 1 monoclonal antibody (ab42824, 1:200, Abcam, USA) and goat anti-rabbit HRP antibody (ab136817, 1:400, Abcam, USA) were used.
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4

Evaluating Cofilin 1 Protein Levels in Cancer

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Cofilin 1 protein levels in cancer tissues, paracancerous tissues, and bladder cancer cells were evaluated by Western blotting (WB). Protein concentrations were determined using the BCA Protein Assay Kit (Keygen Biotech). Proteins were detected using a Cofilin 1 monoclonal antibody (ab42824, 1:1000, Abcam, USA) and a GAPDH polyclonal antibody (AP0063, 1: 10,00, Bioworld) and then visualized using a commercial Immobilon Western HRP Substrate (WBKLS0500, Millipore, USA) under dark conditions.
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5

Quantification of Cofilin and Phospho-Cofilin in Mouse Hippocampus

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The hippocampus was isolated and lysed in radio immunoprecipitation assay buffer (Beyotime, Shanghai, China) containing protease and phosphatase inhibitors. The protein concentration was measured using a bicinchoninic acid protein assay kit (Melone Pharmaceutical Co., Ltd., Dalian, China). An aliquot of 40 µg of total protein was separated by size via 10% sodium salt-polyacrylamide gel electrophoresis and transferred onto polyvinylidene fluoride membranes (Millipore, Darmstadt, Germany). After blocking with 5% non-fat milk (Beyotime) in Tris-buffered saline containing 0.1% Tween-20 (Beyotime) for 1 hour, the membranes were incubated overnight at 4°C with the following primary antibodies: anti-cofilin antibody (1:1000; rabbit; ab42824, Abcam, Cambridge, MA, USA), anti-cofilin (phospho S3) antibody (1:1000; rabbit, ab12866, Abcam), and anti-beta-actin antibody (1:1000; rabbit; ab8227, Abcam). The membranes were then incubated with horseradish peroxidase-labeled secondary antibodies (1:3000; goat anti-rabbit; A16104SAMPLE, Invitrogen, Waltham, MA, USA) for 1 hour at room temperature. The blots were visualized using the Chemistar High-sig enhanced chemiluminescence Western Blotting Substrate (Tanon, Shanghai, China). All protein bands were analyzed using ImageJ software (National Institute of Mental Health, Bethesda, MD, USA) (Kim et al., 2014).
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Cofilin-1 Immunohistochemistry in AD Skin

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We performed immunohistochemistry staining for Cofilin‐1 on AD lesion skin and normal skin. The samples were taken from the skin lesion that was most severe. The biopsy specimens were taken about 2 cm in diameter, deeply enough to reach subcutaneous tissue. Briefly, 5 μm thick tissue sections from formaldehyde‐fixed and paraffin‐embedded samples were dewaxed and rehydrated. Rabbit anti‐human CFL1 antibody (ab42824.html">ab42824; Abcam) was applied, followed by SP staining. IHC assay were performed as described previously.15
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7

Signaling Pathway Protein Analysis

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Antibodies specific for SSH-1L and cofilin-1 were purchased from Abcam (ab76943 and ab42824, respectively). Antibodies against Aur-A and phospho-cofilin-1 were from Cell Signaling Technology (#14475 and #3313, respectively; Danvers, MA, USA). Antibody against β-actin was purchased from Santa Cruz Biotechnology (sc-81178; Santa Cruz, CA, USA). Horseradish peroxidase(HRP)-conjugated anti-mouse and -rabbit antibodies were from Cell Signaling Technology (#7076 and#7078, respectively). The following sense and anti-sense primers were used for qRT-PCR: SSH-1L, 5’-GGAAGAATCGTCACCCAA-3’ and 5’-CAGGCGGTAGAAGAAAGG-3’; and β-actin, 5’-GTGGACATCCGCAAAGAC-3’ and 5’-TGGGTGCCAGGGCAGTGATC-3’.
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8

Quantifying Cofilin S-Glutathionylation in Cocaine-Addicted Rats

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A variation on the biotin switch protocol [21 (link)] was used to determine levels of cofilin S-glutathionylation in the nucleus accumbens in rats following cocaine self-administration and extinction. Sacrifice was conducted by live decapitation and the nucleus accumbens from both hemispheres was dissected on ice [22 (link)]. Tissue proteins were homogenized in buffer containing N-ethylmaleimide (Sigma-Aldrich), which binds non-glutathionylated thiols [23 (link)]. After protein extraction, an aliquot of total protein from each lysate was stored at -20C for later use. Native S-glutathionylated cysteines were de-glutathionylated via reaction with glutaredoxin-1 (Cayman Chemical) and the previously S-glutathionylated cysteines from 600 μg protein were bound to thiol resin (Sigma-Aldrich) prior to elution in 20mM DTT and analysis by Western blot. Eluted samples were run alongside total protein samples from the same rat and abundance of natively S-glutathionylated cofilin was quantified as well as quantity of cofilin in 15 μg of the original lysate. Primary antibody against cofilin (Abcam, ab42824) was diluted in Odyssey blocking buffer (1:1000). Blots were imaged using the LI-COR Odyssey system and bands were quantified using FIJI according to NIH guidelines for analyzing electrophoretic gels (https://imagej.nih.gov).
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9

Immunohistochemical Detection of SSH-1L, Cofilin-1, and Aur-A

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SSH-1L, cofilin, and Aur-A expression in clinical specimens was detected by immunohistochemistry using anti-SSH-1L (ab76943, 1:100) and -cofilin-1 (ab42824, 1:1500) antibodies (both from Abcam, Cambridge, MA, USA) and anti-Aur-A antibody (#14475, 1:50; Cell Signaling Technology, Danvers, MA, USA). The degree of immunoreactivity in the cytoplasm was evaluated by two experienced pathologists blinded to patients’ clinical information. Expression was graded as positive (high staining intensity, >5%) or negative (low staining intensity, 0–5%) [24 (link)]. The slides were scanned using a ScanScope scanner (Aperio, Vista, CA, USA), and images of representative areas were acquired using Image Scope software (Leica, Wetzlar, Germany).
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10

Western Blot Analysis of Cerebellar Proteins

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Cerebellar tissue was homogenized in RIPA lysis buffer with proteinase inhibitors (Roche). Protein extracts were boiled for 5 min at 95°C before loading onto 5–10% gradient gels (50 μg of protein sample per lane). Gels were electrotransferred to a 0.2-μm nitrocellulose membrane (GE Healthcare). Blots were blocked in 4% milk (wt/vol) in PBS-Tween 20 solution for 1 h, then incubated at 4°C overnight with one of the following antibodies: anti-GluA2 (mouse, Millipore MAB397, 1:500), anti-GluA4 (rabbit, Millipore AB1508, 1:200), anti-cofilin (rabbit, Abcam ab42824, 1:10,000). Transferred proteins were detected with appropriate horseradish peroxide-conjugated (HRP) secondary antibodies: goat anti-mouse IgG-HRP (Santa Cruz sc-2005, 1:2000) or goat anti-rabbit IgG-HRP (Santa Cruz sc-2030, 1:2000), reacted with chemiluminescent ECL substrate (Thermo Scientific Pierce), and visualized by ChemiDoc MP System (Bio-Rad Laboratories). Band intensities of GluA2 and GluA4 were normalized to the respective cofilin bands or to the total protein determined by Ponceau S staining of the membranes (Image Lab 5.2, Bio-Rad Laboratories).
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