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24 protocols using universal microplate spectrophotometer

1

HHLA2 Quantification in Tumor Tissue

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The analysis involved 167 samples of tumor tissue and surgical margin tissue.
The fragments of tumor tissue and surgical margin tissue were weighted and homogenized using a PRO 200 homogenizer (PRO Scientific Inc., Oxford, CT, USA) and sonicated with an ultrasonic cell disrupter (UP 100, Hilscher, Germany). The total protein level was determined using a Universal Microplate Spectrophotometer (µQUANT, Biotek Inc., Winooski, VT, USA).
HHLA2 level was determined by the human HHLA2 ELISA kit (EIAAB SCIENCE INC, WUHAN) with a sensitivity of 0.14 ng/mL. After reaching room temperature by all the reagents, we prepared all the substances, working standards, and samples. The first incubation lasted 2 h at 37 °C after adding 100 uL of standards, blanks, and samples per well. The second incubation lasted 1 h at 37 °C after adding the first detection reagent. After washing processes, we added 100 uL of the second detection reagent, then incubated for 1 h at 37 °C. After washing procedure, 90 uL substrate solution was added and the last incubation lasted 20 min at 37 °C. The last process needed addition of 50 uL stop solution. The optical density of each well was determined using Universal Microplate Spectrophotometer (µQUANT, Biotek Inc., Winooski, VT, USA). (450 nm). The results were recalculated to the corresponding total protein level and presented as ng/mL of protein.
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2

Cell Viability Assay of PTC Cells

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About 1 × 104 transfected PTC cells were seeded in 96-well plates. Cell viability was evaluated with Cell Counting Kit-8 (CCK-8, Dojindo, Japan) at different time points (24, 48, and 72 h) after seeding. After treated with CCK-8 at 37°C for 1 h, PTC cells were used to measure the absorbency at 450 nm using Universal Microplate Spectrophotometer (Bio-Tek Instruments, Inc., Winooski, VT, U.S.A.).
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3

VSMC Proliferation Assay with Ang II

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Cell proliferation was analyzed using the MTT assay. VSMCs (1×104/well) were seeded in a 96-well microplate and were cultured with 200 µl DMEM supplemented with 10% FBS. Once the cells had reached 60% confluence they were serum-starved for 16 h at 37°C in a humidified chamber containing 5% CO2. VSMCs were then treated with 100 nM Ang II or 100 nM Ang II + LWDHF (3, 6 and 12 µg/ml) for 24 h; cells were incubated with MTT (5 mg/ml) for the last 4 h at 37°C in a humidified chamber containing 5% CO2 and then dissolved into 150 µl DMSO. Untreated cells served as the control group. MTT was dissolved in PBS at a concentration of 5 mg/ml. Subsequently, optical density was measured at 490 nm using a Universal Microplate Spectrophotometer (BioTek Instruments, Inc., Winooski, VT, USA). All experiments were performed in triplicate.
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4

Daunorubicin Sensitivity in MRP1-Expressing BHK Cells

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The daunorubicin sensitivities of BHK cells expressing variant MRP1/ABCC1 proteins were determined by employing the CCK-8 cytotoxicity assay. In brief, cells were plated in a volume of 90 μL at 3,000 cells per well in 96-well plates. After incubation at 37°C overnight, 10 μL of the media containing varying concentrations of daunorubicin was added to the wells and incubated for an additional 4 days at 37°C. At the end of drug exposure, 10 μL of CCK-8 solution was added to each well and incubated for 1–4 hr. The absorbance at 450 nm was determined by using Universal Microplate Spectrophotometer derived from BioTek.
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5

Cell Proliferation Assays for GC Cells

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The cell proliferation was detected using Cell Counting Kit 8 (CCK-8) assay and EdU incorporation assay. For CCK-8 assay, transfected GC cells in logarithmic growth were seeded in 96-well plates cultured for different times. Cell viability was evaluated with CCK-8 kit (Dojindo, Japan) following the manufacturer’s protocol at different time points. At each time point, 10 μl CCK-8 solution was added and incubated for 1 h at 37 °C. The absorbence was measured at 450 nm using Universal Microplate Spectrophotometer (Bio-Tek Instruments, Inc., Winooski, VT, USA). For EdU incorporation assay, GC cell proliferation ability was analyzed using EdU cell proliferation kit (Ribo, Guangzhou, China) according the manufacturer’s protocol as we previously described [18 (link)].
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6

Evaluating Antimicrobial Effects on DH5α

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To evaluate the inhibition effect of different concentrations of AP-64 and Gm94 on growth of DH5α, the bacteria were cultured in LB at 37 °C until the OD600 reached 0.5 and were then diluted 10-fold. Subsequently, 100 μL of the cell culture was added to each well of microtiter plates containing LB medium supplemented with AP-64 or Gm94 (0.1–10 μM). After incubation at 37 °C for 8 h, OD600 measurements were performed on a universal microplate spectrophotometer (BioTek, Winooski, VT, USA).
Next, growth curve analysis was implemented. DH5α was exposed to AP-64, Gm94, and LL-37 (61302; AnaSpec, Beijing, China) at a concentration of 10 μM for 8 h, and the OD600 values were measured every 2 h. DH5α was used as the control.
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7

Quantifying TNF-α in Saliva and Serum

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Salivary and serum concentrations of TNF-α were determined by enzyme immunoassay by using the Quantikine immunoassay test (R&D Systems, Minneapolis, MIN, USA; cat. no. DTA00D) according to the manufacturer’s instructions. To determine the concentrations of the samples, a calibration curve was prepared by using the standards provided in the kit. Absorbance readings were performed by using the Universal Microplate Spectrophotometer (µQUANT BIO-TEK Inc., Bio-Tek World Headquarters, California, USA) at a wavelength of 450 nm. The results were processed with KCJunior software (Bio-Tek, Vinooski, VT, USA). The sensitivity of the kit was 6.23 pg/mL. The intra- and interassay errors were 3% and 8.4%, respectively.
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8

Quantifying α-Defensin 1 in Saliva and Serum

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Salivary and serum concentrations of α-defensin 1 were determined by enzyme immunoassay by using the Cloud-Clone Corp test (Houston, TX, USA; cat. no. SEB705Hu) in accordance with the manufacturer’s instructions. To determine the concentrations of the samples, a calibration curve was prepared by using the standards provided in the kit. Absorbance readings were performed by using the Universal Microplate Spectrophotometer (µQUANT BIO-TEK Inc., Bio-Tek World Headquarters, Winooski, VT, USA) at a wavelength of 450 nm. The results were processed with KCJunior software (Bio-Tek, Vinooski, VT, USA). The sensitivity of the kit was 0.137 ng/mL. The intra- and interassay errors were <10% and <12%, respectively.
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9

Cell Proliferation Evaluation via MTT Assay

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Cell proliferation was evaluated using an MTT kit (Roche Diagnostics, Germany) after radio- or chemotherapy in the presence or absence of the transfections described above. Cells were seeded at a density of 5 × 103 cells/well and were treated as described above. The cells in each treatment group were harvested by trypsinization at different time points, and the results were recorded using a Universal Microplate Spectrophotometer (BioTek, VT, USA). Experiments were performed in triplicate.
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10

B7H3 Protein Quantification Protocol

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To weigh and homogenize examined tumour and surgical margin tissue, we have followed our previous research papers’ homogenization protocol [18 (link),19 (link)]. We conducted an enzyme-linked immunosorbent assay (ELISA) to determine the concentration of the B7H3 protein. The B7H3 levels were measured using a human B7H3 ELISA kit (Cloud Clone, Wuhan, China), as per the manufacturer’s manual, with a sensitivity of 0.118 ng/mL. The absorbance of the samples was measured at a wavelength of 450 nm using a Universal Microplate Spectrophotometer (μQUANT, Biotek Inc., Winooski, VT, USA). The results were recalculated to correspond to the total protein level and demonstrated as ng/mg of protein.
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