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Stemflex medium

Manufactured by Thermo Fisher Scientific
Sourced in United States, Japan

StemFlex medium is a defined, serum-free culture medium designed for the maintenance and expansion of human embryonic stem cells (hESCs) and induced pluripotent stem cells (iPSCs) in a feeder-free culture system.

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174 protocols using stemflex medium

1

Generation and Characterization of iPSCs

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iPSCs were generated from fibroblasts at the Harvard Stem Cell Institute iPS core, using the CytoTune-iPS 2.0 Sendai Reprogramming Kit (ThermoFisher #A16517). Eight days after transduction, iPSCs were replated and maintained in StemFlex medium (ThermoFisher #A3349401) on Cultrex (R&D #3434-001-02). Emerging iPSC colonies were manually picked and plated between 7/3/18–7/9/18 and expanded in StemFlex medium on Cultrex at 37°C in 5% CO2. Cell were tested for mycoplasma and cryopreserved in 5 cryovials. One vial was thawed to test for recovery, and cells were used for pluipotency immunocytochemistry, pluripotency RT-qPCR, embroid body RT-qPCR for trilineage differentiation, and sent to WiCell for G-banded karyotyping. The iPSCs were subsequently cultured in StemFlex medium on geltrex (ThermoFisher #A1413302) and passaged every 5–7 days using Gentle Cell Dissociation Reagent (StemCell #07174) or ReLeSR (StemCell #05872).
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2

Cardiomyocyte Differentiation of hiPSCs

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Subclones from two control hiPSC lines (LUMC0020iCTRL (Zhang et al., 2014 (link)) [LUMC20]; LUMC0099iCTRL [LUMC99]), and two hiPSC lines derived from patients diagnosed with HCM (LUMC0033iMyBPC [HCM1]; LUMC0035iMyBPC [HCM3] (Birket et al., 2015 (link))) were maintained either in Essential 8 or StemFlex Medium (both Gibco). One day prior to differentiation (d-1), the hiPSCs were harvested using TrypLE Select (Gibco) and plated onto Matrigel-coated wells of a 12-well cell culture plate, either in Essential 8 Medium containing RevitaCell Supplement (1:200 dilution; Gibco) or StemFlex Medium at 3.9 × 104/cm2. The hiPSCs were differentiated into cardiomyocytes either using the Pluricyte Cardiomyocyte Differentiation Kit (NCardia) according to the manufacturer's instructions, or in a modified BPEL medium (Elliott et al., 2011 (link)) supplemented with small molecules. Specifically, 5 μM CHIR99021 (Axon Medchem) from day 0 to day 2 of differentiation and 5 μM XAV939 + 0.25 μM IWP-L6 (AbMole) from differentiation day 2 to day 4. The hiPSC-CMs were maintained in Medium C (NCardia) until differentiation day 20–21 (LUMC20 and LUMC99), or the modified BPEL medium until differentiation day 14 or 17 (HCM1 and HCM3), and then dissociated as previously described (van den Berg et al., 2014 ).
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3

Cardiomyocyte Differentiation of hiPSCs

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Subclones from two control hiPSC lines (LUMC0020iCTRL (Zhang et al., 2014 (link)) [LUMC20]; LUMC0099iCTRL [LUMC99]), and two hiPSC lines derived from patients diagnosed with HCM (LUMC0033iMyBPC [HCM1]; LUMC0035iMyBPC [HCM3] (Birket et al., 2015 (link))) were maintained either in Essential 8 or StemFlex Medium (both Gibco). One day prior to differentiation (d-1), the hiPSCs were harvested using TrypLE Select (Gibco) and plated onto Matrigel-coated wells of a 12-well cell culture plate, either in Essential 8 Medium containing RevitaCell Supplement (1:200 dilution; Gibco) or StemFlex Medium at 3.9 × 104/cm2. The hiPSCs were differentiated into cardiomyocytes either using the Pluricyte Cardiomyocyte Differentiation Kit (NCardia) according to the manufacturer's instructions, or in a modified BPEL medium (Elliott et al., 2011 (link)) supplemented with small molecules. Specifically, 5 μM CHIR99021 (Axon Medchem) from day 0 to day 2 of differentiation and 5 μM XAV939 + 0.25 μM IWP-L6 (AbMole) from differentiation day 2 to day 4. The hiPSC-CMs were maintained in Medium C (NCardia) until differentiation day 20–21 (LUMC20 and LUMC99), or the modified BPEL medium until differentiation day 14 or 17 (HCM1 and HCM3), and then dissociated as previously described (van den Berg et al., 2014 ).
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4

Fibroblast-derived iPSC Culture

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Patient skin fibroblasts were obtained from Coriell Cell Repositories (GM11097) and cultured in DMEM (Thermo Fisher Scientific), supplemented with 10% fetal bovine serum (FBS), 100 units/ml penicillin, and 100 μg/ml streptomycin in a humidified incubator with 5% CO2 at 37 °C. TRNDi004-I iPSCs were cultured in StemFlex medium (Thermo Fisher Scientific) on Geltrex (Thermo Fisher Scientific)-coated plates. The cells were maintained at 5% CO2, 5% O2 at 37 °C and the cells were passaged with 0.5 mM ethylenediaminetetraacetic acid (EDTA) when colonies were approximately 70% confluent.
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5

Culturing and Maintaining Human iPSCs

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iPSCs are cultured in StemFlex medium (ThermoFisher) on Matrigel (Millipore). Pluripotent cultures are maintained by manually picking colonies with overt pluripotent morphology (small tightly packed cells, smooth colony borders, low cytoplasmic to nuclear ratio) using a sterile pulled glass pipet under an inverted light microscope into sterile PBS, centrifuged to remove the PBS, and transferred to a new Matrigel-coated plate in StemFlex medium. Cultures are expanded before experiments by passaging using ReLeSR (STEMCELL Technologies) as per the manufacturer’s instructions into Matrigel coated plates with StemFlex medium.
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6

Generation and Maintenance of Human iPSCs and Mouse Cell Lines

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Two human iPSC lines, BJFF.6 from a male donor and AN1.1 from a female donor, were generated at the Genome Engineering & Stem Cell Center (GESC) at Washington University, St Louis, MO, USA. iPSCs were maintained on Matrigel (Corning)-coated plates in Stem-Flex medium (Thermo Fisher Scientific). In addition, four mouse cell lines – NIH3T3, MC3T3-E1, CT26 and 4T1 – were obtained from the ATCC and cultured in the ATCC-recommended media. All cell lines were grown in a humidified incubator set at 5% CO2 and 37°C.
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7

Generation of iPS-derived Neurons

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The generation of cell lines from human iPS cells was approved by the institutional review board (IRB) of Brigham & Women’s Hospital (IRB protocol 2015P001676). iPSCs were generated from peripheral blood mononuclear cells (PBMCs) from the Religious Order Study (ROS) and Memory and Aging Project (MAP) cohort using the Sendai virus reprogramming method as previously described25 (link). iPS cells underwent a rigorous quality check procedure that includes a sterility check, mycoplasma testing, karyotyping and pluripotency assays performed by the New York Stem Cell Foundation (NYSCF). iPS cells were maintained using StemFlex Medium (Thermo Fisher Scientific). For this study, two cell lines (one male and one female) were used for induced neuron differentiation.
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8

Generation of Induced Neurons from iPSCs

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The generation of cell lines from human induced pluripotent stem cells (iPSCs) was approved by the institutional review board (IRB) of Brigham & Women’s Hospital (IRB protocol #2015P001676). iPSCs were generated from peripheral blood mononuclear cells (PBMCs) from the Religious Order Study (ROS) and Memory and Aging Project (MAP) cohort using the Sendai virus reprogramming method as previously described25 (link). iPSCs underwent a rigorous quality check procedure that includes a sterility check, mycoplasma testing, karyotyping, and pluripotency assays performed by the New York Stem Cell Foundation (NYSCF). iPSCs were maintained using StemFlex™ Medium (Thermo Fisher Scientific). For this study, two cell lines (one male and one female) were used for induced neuron differentiation.
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9

Cerebral and Ventral Organoid Generation

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Male (XY) and female (XX) stem cells (male - H1 (WiCell WA01) and female - H9 (WiCell WA09)) were approved for use in the project by the UK Stem Cell Bank Steering Committee. Cells were cultured on Matrigel® (Corning, 356234) – coated plates and maintained in StemFlex™ medium (Thermo Fisher, A3349401). We used the commercial kit (STEMdiff™ Cerebral Organoid Kit, StemCell Technologies 08570) with previously described modifications to increase embryoid body surface area52 (link)
, namely microscaffolds (18000 cells seeded) or smaller EBs (2000 cells seeded). Organoids were transferred to the orbital shaker at 57 rpm (f25 cm) at 15d (±1 day, depending on the morphology). Matrigel® was removed manually between days 14-17, after visual inspection. Organoids were transferred to IDM+A supplemented with diluted Matrigel® on day 30 and kept at those conditions until fixation. Ventral organoids were generated as previously described53 (link)
, with ventralizing factors (2.5 μM IWP-2, Sigma, I0536; 100 nM SAG, Sigma, 566661) supplemented in the neural induction (NI) medium for 2 days.
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10

Differentiation of iPSCs to Cardiomyocytes

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Cell reprogramming into iPSC lines was previously described by Rovina et al. [15 (link)]. Briefly, iPSCs were seeded in Matrigel (Corning, 356,230) coated 6 well plates in StemFlex medium (ThermoFisher, A3349401) supplemented with RevitaCell (ThermoFisher, A2644501). On Day 0, medium was replaced with BPEL medium and cells were treated with 6 mM CHIR99021 (Bertin bioreagent, 13,122), 100 µg/ml Activin A (MiltenyiBiotec, 130–115-008), and 100 µg/ml BMP4 (R&D Systems, 5020-BP). On Day 3, cells were treated with 10 mM XAV939 (R&D Systems,3748), 100 µg/ml BMP4 and 2 mM Retinoic acid (Sigma Aldrich, R2625). Medium is changed on Day6 with BPEL + 30 ng/ml BMP4 + 1 µM Retinoic acid. After 3 days, cells were replated on fibronectin coated plates with BPEL medium supplemented with 20 mM SB 431542 (R&D Systems,161).
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