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20 protocols using anti cd11c hl3

1

Multiparametric Flow Cytometry of Immune Cell Populations

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Single cell suspensions from spleen, liver and visceral adipose tissue were incubated with 2.4G2 mAb (anti-FcγRIII/II) to block non-specific binding of primary mAb and then cells were stained with a combination of the following mAb: FITC conjugated anti-TCRβ (H57-597, BioLegend), anti-CD11b (Mac-1, TONBO Biosciences), anti-CD206 (C068C2, BioLegend), APC conjugated anti-NK1.1 (PK136, BioLegend), anti-CD11c (HL3, BD Pharmingen), PE conjugated anti-α-GalCer:CD1d complex antibody (L363, BioLegend), α-GalCer (PBS-57)-loaded CD1d tetramer kindly provided by NIH Tetramer Core Facility at Emory University (Atlanta) and Brilliant Violet 421 conjugated anti-F4/80 (BM8.1, TONBO Biosciences). 3T3-L1 adipocytes were stripped off by PBS containing 1.5 mM EDTA and stained with PE conjugated anti-CD1d (1B1, BioLegend), anti-CD80 (16-10A1, BD Pharmingen) and -CD86 (GL1, BD Pharmingen). Stained cells were sorted using FACS Aria (BD Biosciences) or assessed using FACS Caliber flow cytometers (BD Biosciences). Data were analyzed with FlowJo software (FlowJo, LLC).
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2

Multicolor Flow Cytometry Analysis

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All antibodies (Abs) used were purchased from BioLegend unless specified otherwise. Abs in the lineage (Lin) cocktail included anti-FcεR (MAR-1; eBioscience), anti-B220 (RA3-6B2), anti-CD19 (ID3; BD Biosciences), anti-Mac-1 (M1/70; BD Biosciences), anti-Gr-1 (R86-8C5; BD Biosciences), anti-CD11c (HL3; BD Biosciences), anti-NK1.1 (PK 136), anti-Ter-119 (Ter-119), anti-CD3 (145-2C11), anti-CD8α (53-6.7; BD Biosciences), anti-CD5 (53-7.3), anti-TCRβ (H57-597), and anti-γδTCR (GL-3; BD Biosciences). Additional Abs used included anti-CD45.2 (104), anti-CD45.1 (A20), anti-CD4 (RM4-5; BD Biosciences), anti-cKit (2B8), anti-Sca-1(D7), anti-Thy1.2 (53-2.1), anti-IL-5 (TRFK5), anti-IL-13 (eBio13A; eBioscience), anti-Siglec F (E50-2440; BD Biosciences), anti-IL7Rα (A019D5), anti-α4β7 (DATK32; eBioscience), anti-CD25 (PC61), anti-PLZF (Mags.21F7; eBioscience), and anti-ST2 (DIH9).
Cell sorting was performed on a FACSAria II (BD Biosciences), and flow cytometric analysis was performed on a LSR-II (BD Biosciences). Intracellular staining of transcription factors was done using Foxp3 Staining Buffer kit (eBioscience). Staining of cytokines was carried out using Cytofix/cytoperm kit (BD Bioscience).
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3

Isolation and Characterization of Stromal Vascular Fraction

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SVF was prepared as reported55 (link),59 (link),60 (link). Briefly, inguinal SAT or VAT were isolated from euthanized mice, minced and digested for 60 min in DMEM containing collagenase type I (2 mg/ml per gram of tissue; Invitrogen) at 37°C. Cell suspensions were then filtered through a 40-μm cell strainer and the SVF was collected as a pellet after centrifugation at 500g for 5 min. After RBC lysis, cells were stained with anti-CD45 (30-F11, BD), anti-F4/80 (clone BM8, BioLegend), anti-CD11b (M1/70, BD), anti-CD11c (HL3, BD), anti-CD206 (c06802, BioLegend; MR5D3, Acris), anti-TNF (MP6-XT22, BioLegend), anti-iNOS (CXNFT, eBioscience) and anti-CD49d [clone PS/2, AbD Serotec or clone 9C10(MFR4.B), BioLegend]. Cells were analyzed in a FACS Canto II flow cytometer (BD).
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4

Flow Cytometry Staining Protocol

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All antibodies were used FITC, PE, Cy3, PE-Cy5, PE-Cy7, APC, eFluor660 or biotin conjugated. The biotinylated mAb were revealed with Streptavidin-PE-Cy5. mAb were used at 0.1–1 µg/1×106 cells in 100 µl PBS/2% FCS/0.02% NaN3 (FACS buffer) or HBSS/0.3% BSA incubated on ice for 20–30 min. Antibodies used were: anti-CD16/CD32 (Fcγ III/II Receptor) (2.4G2), anti-CD90.1 (Thy1.1) (HIS51), anti-CD8α(Ly-2) (53–6.7), anti-CD3ε (145-2C11), anti-Vα2 T cell receptor (B20.1), anti-α4β7 (DATK32), anti-IAb (AF6-120.1) and anti-CD11c (HL3) all from BD Biosciences (Heidelberg, Germany), anti-CCR9 (B cell hybridoma supernatant, kindly provided by Prof. R. Förster), anti-rat IgG (secondary for CCR9) (from Jackson ImmunoResearch Europe Ltd.), anti-CCR10 (248918), E-selectin/human IgG-Fc-Chimera (both from R&D) and polyclonal rabbit anti-human IgG (secondary for E-lig staining) (DakoCytomation, Hamburg, Germany).
All stainings were performed following a standard protocol except of E-lig staining. This staining was performed as described [16] (link). Control staining for E-lig and CCR9 was done with secondary Ab only, while corresponding isotype control mAb or fluorescence minus one (FMOs) were used as a control for all other stainings.
Data were acquired and analysed on a FACScan using CellQuestPro software (BD Biosciences) or on a FACS Canto II (Becton Dickinson) and analysed using FlowJo.
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5

Multiparameter Flow Cytometry Analysis

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Cell surface staining was performed using standard methods with the following antibodies: anti-CD4 (GK1.5, Biolegend, San Diego, CA), anti-CD8 (53-6.7, BD Pharmingen, San Jose, CA), anti-B220 (RA3-6B2, BD Pharmingen), anti-CD11b (M1/70, BD Pharmingen), anti-CD11c HL3, (BD Pharmingen) and CD25 (PC61, BD Pharmingen). Staining for FoxP3 was performed using the FoxP3 buffer set (eBioscience, San Diego, CA) according to the manufacturers instructions, anti-FoxP3 antibody (FJK16A, eBioscience), anti-Bim antibody (C34C5, Cell Signaling Technologies, Beverly, MA) and anti-AKT pS473 (M89-61, BD Pharmingen). Central (cTregs) and effector Tregs (eTregs) were analyzed as described in reference (54 (link)). All flow cytometry were performed on a FacsCanto II cytometer (BD Biosciences, San Jose, CA), and data were analyzed using FlowJo v X 10.0.7 software (Tree Star, Inc., Ashland, OR).
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6

Isolation and Characterization of Stromal Vascular Fraction

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SVF was prepared as reported55 (link),59 (link),60 (link). Briefly, inguinal SAT or VAT were isolated from euthanized mice, minced and digested for 60 min in DMEM containing collagenase type I (2 mg/ml per gram of tissue; Invitrogen) at 37°C. Cell suspensions were then filtered through a 40-μm cell strainer and the SVF was collected as a pellet after centrifugation at 500g for 5 min. After RBC lysis, cells were stained with anti-CD45 (30-F11, BD), anti-F4/80 (clone BM8, BioLegend), anti-CD11b (M1/70, BD), anti-CD11c (HL3, BD), anti-CD206 (c06802, BioLegend; MR5D3, Acris), anti-TNF (MP6-XT22, BioLegend), anti-iNOS (CXNFT, eBioscience) and anti-CD49d [clone PS/2, AbD Serotec or clone 9C10(MFR4.B), BioLegend]. Cells were analyzed in a FACS Canto II flow cytometer (BD).
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7

Multiparametric Flow Cytometry Analysis

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The harvested spleens were mashed and single-cell suspensions of the spleens were stained with the following surface antibodies: anti-CD45 (30-F11, BD Biosciences), LIVE/DEAD Fixable Blue cell stain (Invitrogen), anti-CD19 (ID3, BD Biosciences), anti-CD8a (53-6.7, BioLegend), anti-CD27 (LG7F9, eBioscience), anti-CD11b (M1/70, BioLegend), anti-CD11c (HL3, BD Biosciences), anti-CD86 (GL1, BioLegend), anti-NK1.1 (PK136, BioLegend), anti-NKp46 (29A1.4, BioLegend), anti-MHC Class II (M5/114.15.2, BD Biosciences), anti-F4/80 (BM8, BioLegend), anti-CD80 (16-10A1), anti-CD3 (17A2, BioLegend), anti-CD4 (RM4-5, Invitrogen), anti-CTLA-4 (UC10-4B9, BioLegend), anti-PD-1 (29F.1A12, eBioscience), anti-CD28 (37.51, BioLegend), anti-CD44 (IM7, BD Biosciences), anti-CD43 (1B11, BioLegend), anti-CD47 (miap301, BioLegend), anti-CD62L (MEL-14, BioLegend), anti-CD25 (PC61.5, eBioscience), and anti-CD107a (1D4B, BioLegend). Intracellular staining was then performed with a FOXP3 permeabilization and fixation kit (eBioscience) according to manufacturer’s recommendations using the following antibodies: Ki-67 (B56; BD Biosciences) and GrB (QA16A02, BioLegend). Flow cytometric data were collected with a Beckman Coulter Cytoflex LX (6-L NUV) flow cytometer and analyzed using FlowJo software (Tree Star).
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8

Cytokine Production in Immunized Mice

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Commercially available ELISA Kits were used for the quantification of the cytokines IL-12p70, IL-23, IL-6 and IL-10 from cell culture supernatants. Immune cells were isolated from draining lymph nodes of immunized mice on day 3 or 7 as indicated and analzsed for cytokine production by qRT-PCR or flow cytometry. Intracellular cytokine staining was performed after stimulating cells with PMA and ionomycin (Sigma-Aldrich) in the presence of GolgiStop® (BD Biosciences) for 4 h20 (link). Cells were fixed with 2% formaldehyde, permeabilized with saponin containing buffer and stained with fluorochrome-labeled antibodies directed against CD4 (Gk1.5, Biolegend) and IFN-γ (XMG1.2, eBioscience), IL-4 (11B11, eBioscience), IL-17A (TC11-18H10, BD Biosciences), IL-2 (JES6-5H4, eBioscience), IL-10 (JES5-16E3, eBioscience) or TNF (MP6-XT22, eBioscience). Fluorochrome-labeled anti-CD11c (HL3, BD Biosciences) antibodies were used for staining DC. Cells were analysed by flow cytometry (LSRII fow cytometer, BD Biosciences) and collected data were analysed by FLOWJO/FCS Express. Concentrations of indicated cytokines in BAL fluid were measured by Cytometric Bead Array (BD Biosciences, San Jose, CA, USA).
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9

Multiparameter Flow Cytometry of Mouse Blood

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Flow cytometry was performed on mouse blood as previously described (63 (link)). Briefly, to obtain single-cell suspensions, spleen samples were ground between sterile frosted glass slides in 7 ml of red blood cell lysis buffer (0.15 mM NH4Cl, 10 mM KHCO3, 0.1 mM disodium ethylenediaminetetraacetic acid, pH 7.2) and then filtered through sterile nylon mesh. Whole blood, obtained by cardiac puncture, was treated with red blood cell lysis buffer twice. Cell pellets were washed and resuspended in phosphate-buffered saline containing 2 mM ethylenediaminetetraacetic acid and 0.5% bovine serum albumin. Fluorophore-conjugated antibodies with specificity to mouse cell antigens were as follows: anti-CD11b (M1/70) (BD Biosciences Cat# 550993, RRID:AB_394002), anti-CD11c (HL3) (BD Biosciences Cat# 561022, RRID:AB_2033997), anti-SiglecF (E50-2440) (BD Biosciences Cat# 552125, RRID:AB_394340), anti-Ly6G (1A8) (BD Biosciences Cat# 561236, RRID:AB_10611860), and anti-CD36 (JC63.1) (Cayman Chemical Cat# 10009870, RRID:AB_10342682). Live/dead fixable dead cell stains (ThermoFisher) were used to exclude dead cells. CD11b+/c+ cells were analyzed for CD36 expression. Paraformaldehyde-fixed cells were acquired using a Becton Dickinson (BD) LSR Fortessa flow cytometer (BD Biosciences, University of Alberta Flow Cytometry core) and analyzed with FlowJo (version 10) software (RRID:SCR_008520).
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10

Multiparameter Analysis of Immune Cells

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Tissues were excised from mice, minced and digested in Collagenase for 30 min. The samples were filtered through a 40-μm filter. Erythrocytes were removed with Lysing buffer (BD Biosciences). The samples were then incubated for 10 min with anti-CD16/CD32 blocking antibodies (BD Biosciences). The cells were stained with the following antibodies: anti-CD206 (C068C2, BioLegend), anti-CD11c (HL3, BD Biosciences), anti-CD11b (M1/70, BioLegend), anti-CD45 (30-F11, eBioscience), anti-F4/80 (CI: A3-1, BD Bioscience), anti-I-A/I-E (M5/114.15.2, BioLegend), anti-CD8a (53-6.7, BioLegend), anti-CD4 (GK1.5, BioLegend), anti-TCRβ (H57-597, BioLegend), anti-PD-1 (29F.1A12, BioLegend), and anti-CD44 (IM7, BioLegend). The samples were washed, incubated with 7-amino-actinomycin D (BD Biosciences) and then analysed on a FACSAria II (BD Biosciences).
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