The largest database of trusted experimental protocols

17 protocols using l nil

1

Murine Macrophage Polarization Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bone marrow was extracted from the femur and longbone of 6-12 week old mice and plated at a concentration of 2x106/ml and cultured in BMDM media containing IMDM, 10% FBS, 10ng/ml Macrophage-Colony Stimulating Factor (m-CSF) (Gemini), 1% penicillin/streptomycin, 1% glutamine. Media was changed to fresh BMDM media on day 3. After 7 days in culture, cells were changed to M1 media containing IMDM, 10%FBS, 120-180 ng/ml LPS (Sigma), 50 ng/ml IFN-γ (Biolegend), 1% penicillin/streptomycin, 1% glutamine. For M2 polarizations, cells were changed to M2 media containing IMDM, 10% FBS, 10ng/ml IL-4 (Biolegend), 1% penicillin/streptomycin, 1% glutamine. After 24 hours polarization cells were collected for analysis. In experiments with L-NIL (Cayman Chemical), 40 uM of L-NIL was added to M1 media.
+ Open protocol
+ Expand
2

Comprehensive Ferroptosis Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
MEM (Thermo Fisher Scientific, 11095-080), FCS (Gibco, 10437-028), Lysogeny broth (LB) (Sigma-Aldrich, L3152), RSL3 (Selleck Chemicals, S8155), erastin (Selleck Chemicals, S7242), ferrostatin-1 (Sigma-Aldrich, SML0583), Chloroquine (Sigma, C6628), NH4Cl (Sigma, A9434), MG132 (Selleck Chemicals, S2619), P3421 (Selleck Chemicals, S1013), 1400W (Cayman, 81520), L-NIL (Cayman, 80310), BSA (Sigma-Aldrich), DETA-NONOate and DPTA-NONOate (Caymen Chemical), NADPH (Sigma), Glutathione peroxidase (Sigma G6137), Cumene hydroperoxide (Sigma C0524), Thiol fluorescent probe IV (Millipore 595504), Glutathione reductase (Sigma), Glutathione reduced (Sigma G4251), 15-HpETE-PE (Caymen Chemical), Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, 23225), anti- GPx4 (rabbit monoclonal, Abcam, ab125066), anti-Lamp2a (Abcam, ab18528), anti-iNOS (Abcam, ab3523), anti-actin (mouse monoclonal, Sigma-Aldrich, A3854, clone AC-15), secondary antibody, goat anti-rabbit (Sigma-Aldrich, A0545).
+ Open protocol
+ Expand
3

Vasodilator and Antioxidant Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
L-NIL (hydrochloride) and DEANONOate were purchased from Cayman Chemical (Ann. Harbor, MI). PTIO, SNAP, and Dithiothreitol were from Sigma-Aldrich (St. Louis, MO). Vemurafenib (PLX4032/RG7204) from Selleckchem (Houston, TX). All chemicals were prepared freshly from powdered stock on the day of each experiment. All cell culture reagents were from Invitrogen.
+ Open protocol
+ Expand
4

Immune Cell Depletion and Blockade

Check if the same lab product or an alternative is used in the 5 most similar protocols
NK-cell depletion was performed by a single i.p. injection of 200 µg anti-NK1.1 antibody (clone PK136, BioXCell) in 100 µl, diluted in pH 7.0 Dilution Buffer (BioXCell). CD8+ T cell depletion was performed by i.p. injections of initially 100 µg, followed by weekly injections of 50 µg of anti-CD8 antibody (clone 2.43, BioXCell). MHC-II blockade was performed by a single i.v. injection of 500 µg of anti-MHC-II antibody (clone Y-3P, BioXCell) directly after inducing anaesthesia for 2P-IVM and roughly 30 to 60 min before data acquisition. IFNγ blockade was performed by weekly i.p. injection of 500 µg of anti-IFNγ antibody (clone XMG1.2, BioXCell) in 100 µl, diluted in pH 8.0 buffer. Monocyte depletion was performed by i.p. injections of 20 µg of anti-CCR2 (clone MC21, provided by M. Mack) for five consecutive days. Neutrophil depletion was performed by i.p. injections of 100 µg of anti-Ly6G (clone 1A8, BioXCell) every fifth day. Inhibition of iNOS was performed by daily i.p. injection of 200 µg of L-NIL (Cayman Chemicals) diluted in 100 µl of PBS.
+ Open protocol
+ Expand
5

Vascular Reactivity Pharmacological Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Acetylcholine, sodium nitroprusside, U46619, noradrenaline, serotonin, L-NAME, indomethacin, and Sirius Red were purchased from Sigma-Aldrich (USA). L-NIL was obtained from Cayman Chemical (USA).
+ Open protocol
+ Expand
6

Immune Regulation by M-MDSC

Check if the same lab product or an alternative is used in the 5 most similar protocols
Infection induced spleen M-MDSC were sorted and co-cultured with naïve, CFSE labeled CD4+ T cells in the presence of immobilized anti-CD3 antibody (5 μg/ml). Different ratios of T cells and M-MDSC were tested in the presence or absence of Nos2 inhibitor, L-NIL (Cayman chemicals) at a final concentration of 40 μM. T cells proliferation was measured after 4 days in culture.
+ Open protocol
+ Expand
7

Selective iNOS Inhibition in Obese Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
C57BL6/J mice fed a standard or HFD were treated with the selective iNOS inhibitor L-NIL (80 mg/kg of body weight; Cayman Chemical) or saline twice a day. This treatment protocol was adapted from Pauli et al. [33] (link). The inhibitor was dissolved in injection water and administered via intraperitoneal injections for 7 days.
+ Open protocol
+ Expand
8

Evaluating Nitric Oxide Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
DETA NONOate (#82120), 1400W (#80200), and L-NIL (#80300) were purchased from Cayman Chemical (Ann Arbor, MI). Sulfanilamide (#S9251), Sodium Nitrite (#S2252), N-(1-Naphthyl) ethylenediamine dihydrochloride (#22,248-8), and sodium ascorbate (#A7631) were purchased from Sigma-Aldrich (Saint Louis, MO). N-Ethylmaleimide (NEM) (#23030), IP Lysis Buffer (#87787), Protease and Phosphatase Inhibitor Cocktail (#78440), protein quantification assay kit (#A53226) Streptavidin Magnetic beads (#65602), N-[6-(biotinamido) hexyl]-3′-(2′-pyridyldithio)-propionamide (HPDP-Biotin) (#21341) and Protein A Agarose Beads (#20333) were purchased from Thermo Fisher Scientific (Waltham, MA.). LY294002 (#S1105) and Wortmannin (#2758) were purchased from Selleck Chemicals (Houston, TX). All of the cell culture media was purchased from Corning (Corning, NY). All antibodies, including phospho-AKT Ser 473 (pAKTS473)(#4060), AKT (#9272), PTEN (#9559), GSK-3α/β (#5676), phospho-GSK-3α/β (#8566), and PTEN (#9788), were purchased from Cell Signaling Technology (Beverly, CA) unless stated otherwise. We purchased iNOS antibody (#SC-651) from Santa Cruz Biotechnology (Santa Cruz, CA).
+ Open protocol
+ Expand
9

Assessing Endothelial Nitric Oxide Release

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ex vivo endothelial function was assessed based on the release of NO from isolated mouse aorta applying an electron paramagnetic resonance (EPR) spin trapping approach. According to a previously described protocol [49 (link)], the cleaned mouse thoracic aorta was opened longitudinally and pre-incubated in Krebs–Hepes buffer in the presence of L-NIL (Cayman Chemical, Ann Arbor, MI, USA) for 30 min; then, a freshly prepared Fe(DETC)2 spin trap and calcium ionophore (Sigma Aldrich, St. Louis, MO, USA) were added obtaining the final concentrations of 285 μM and 1 μM, respectively. After 90 min of incubation, each aorta was drained on a Kimwipe, weighted, placed into the middle of a column of Krebs–Hepes buffer in a dedicated vessel, and immediately frozen in liquid nitrogen. Samples were stored at −80 °C until NO-Fe(DETC)2 adducts were measured using an X-band EPR spectrometer EMX Plus (Bruker, Bremen, Germany). NO release was expressed as the EPR amplitude of the second hyperfine line of the acquired NO-Fe(DETC)2 spectra in arbitrary units and normalised to the aorta weight.
+ Open protocol
+ Expand
10

Modulating AMPK Activity in MDSCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
For modulation of AMPKα activity, MDSC were treated with 5-Aminoimidazole-4-carboxamide 1-β-D-ribofuranoside (Aica-R, 200 μM, Millipore), Metformin (10 mM, Millipore), or Dorsomorphin-Compound C (CC, 5 μM, Cayman). Moreover, LLC-bearing mice received CC (15 mg/kg, i.t.), Metformin (150 mg/kg, i.p.), or Aica-R (0.5 mg/kg, i.p.) 9 days post-tumor injection and continued to be treated daily until tumor endpoint. For in vitro studies inhibiting Nos2, we used L-NG-Monomethylarginine (L-NMMA, 500 μM, Cayman) and Lysine-dihydrochloride (L-NIL, 300 μM, Cayman); whereas for in vivo assays, LLC-bearing mice were treated daily starting at day 0 of tumor injection with 20 mg/kg L-NIL (Cayman, i.p.). Human IL-6, mouse granulocyte-monocyte colony stimulating factor (GM-CSF) and mouse granulocyte-colony stimulating factor (G-CSF) were from Gemini. Human GM-CSF was from eBioscience. Thioglycolate broth from Sigma-Aldrich was prepared at 4% in water, autoclaved, and stored in dark for 2 weeks before i.p. injection. To test the role of GM-CSF in TES-treated MDSC, we utilized blocking antibodies against mouse-GM-CSF (5 μg/ml, Clone MP1022E9) and/or mouse-GM-CSF receptor α (1 μg/ml, Clone 698423, R&D systems). Rat IgG2a isotype (Clone 2A3, BioXcell) was used as control.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!