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26 protocols using prominence lc 20ad

1

Quantitative Analysis of Bacterial Metabolites

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As mentioned above, the acid production was measured by pH-stat. Subsequently 0.45 mL of the reaction mixture (OD at 660 nm: 3.5) was sampled and immediately mixed with 0.05 mL of 6 N perchloric acid to terminate bacterial carbohydrate metabolism. The samples were then removed from the anaerobic box and filtered through a polypropylene membrane (pore size: 0.20 μm; Toyo Roshi Ltd., Tokyo, Japan). The filtrates were quantitatively analyzed by high performance liquid chromatography (HPLC; Shimadzu Prominence LC-20AD, Shimadzu Co., Ltd., Kyoto, Japan). The concentrations of the acidic end-products lactate, formate, and acetate were quantitatively analyzed, as described previously (Takahashi et al., 1987 (link); Norimatsu et al., 2015 (link)).
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2

Quantifying organic acids from ethanol or glucose

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The reaction mixtures used to assess acetaldehyde production from ethanol or glucose at pH 7.0 were centrifuged at 10,000 rpm at 4 °C for 7 min, and the supernatants were collected. The organic acid (acetate, lactate, and formate) levels of the samples were then measured as described previously39 (link),40 (link). After the bacteria were removed using a filter (pore size: 0.20 µm; polypropylene; Toyo Roshi Ltd., Japan), the organic acid levels of the samples were determined using high-performance liquid chromatography (Shimadzu Prominence LC-20AD, Shimadzu Co. Ltd., Japan).
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3

Quantitative Analysis of Acidic End-Products

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The concentrations of acidic end-products were analyzed, as described previously (Takahashi et al., 1987 (link); Norimatsu et al., 2015 (link)). In the experiment described above, the reaction mixture (0.45 mL) was sampled before and 10 min after the addition of glucose. The samples were immediately mixed with 0.05 mL of 6N perchloric acid to terminate bacterial metabolism, before being removed from the anaerobic box and filtered through a polypropylene membrane (pore size: 0.20 μm; Toyo Roshi Ltd., Tokyo, Japan). The filtrates were quantitatively analyzed using high-performance liquid chromatography (Shimadzu Prominence LC-20AD, Shimadzu Co., Ltd., Kyoto, Japan).
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4

Antibiotic-Induced Alterations in Cecal SCFA Profile

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Cecal contents were obtained from 8-week-old mice that had been treated orally (or not) with an antibiotic cocktail (ampicillin, neomycin, and metronidazole each at 1 g/l, and vancomycin at 0.5 g/l) for 4 weeks. The samples were diluted in sterile water, mixed with 2-ethylbutyrate as an internal control, and then labeled with 2-nitrophenylhydrazine with the use of a YMC-Pack FA kit (YMC, Kyoto, Japan). SCFAs in the samples were analyzed by liquid chromatography (Prominence LC-20AD; Shimadzu, Kyoto, Japan).
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5

Size Exclusion Chromatography for Biomolecules

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Samples were analyzed on a Shimadzu Prominence LC-20AD dual pump system with a SPD-20A UV/vis Spectrophotometer detector (Shimadzu Scientific Instruments Inc., Columbia, MD) using a GE Healthcare Superose 6 Increase column (GE Healthcare Bio-Sciences, Marlborough, MA). The analysis was performed at 280 and 230 nm wavelength using 0.5 mL/min flow rate. A PBS solution pH 7.0 mobile phase was selected to allow good separation, resolution, and for compatibility with solutions contained in samples of interest without hindering resolution and elution of the size standards. Several injections of the mobile phase alone were run throughout the batch to ensure there was no peak carry-over and/or peaks from the mobile phase contributing to the baseline. Run time was determined based on the length of time it took for the size standards to elute (40 min). In instances where an aggregate peak eluted into the next sample injection, run time was extended to include all sample peaks and size standards were run again to verify column efficiency.
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6

Analysis of Organic Acids in Biological Samples

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After being thawed, the stored supernatants were centrifuged again (at 1,000 g and 5°C for 7 min), and the resultant supernatants were filtered through a polypropylene membrane (pore size: 0.20 μm; Toyo Roshi Ltd., Tokyo, Japan). The sample was analyzed by HPLC (high-performance liquid chromatography) (Shimadzu Prominence LC-20AD; Shimadzu Corporation, Kyoto, Japan) to determine the levels of acetic acid, lactic acid, formic acid, malic acid, fumaric acid, succinic acid, citric acid, α-ketoglutaric acid, oxalic acetic acid, and pyruvic acid.
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7

HPLC Quantification of ETR in Nanoparticles

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HPLC was used to quantify ETR content for drug loading measurements of NP and composites, in vitro release experiments for ETR-NP, and lavage samples from the PK study. A Prominence LC20AD (Shimadzu) HPLC system was used that was fitted with a photodiode array detector and Phenomenex Kinetex C18 column (250x4.6 mm, 5 μm particle size). The mobile phase was 65% ACN:35% ammonium acetate buffer (10 mM) at a flow rate of 1 mL/min under isocratic conditions. The column oven was set to 30°C. ETR was detected at 309 nm at a retention time of 6.3 min. Linearity was established from 0.024 – 100 μg/mL using a 10 μL injection volume (standard curve in DMSO). Blank samples containing homogenized organs from untreated mice were run in parallel with mice from treatment groups to ensure there was no background interference, as well as standards and spiked samples in blank tissue homogenate.
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8

Spectroscopic Analysis of Organic Compounds

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Optical rotations were measured on a Rudolph IV Autopol automatic polarimeter. IR spectra were determined on a Thermo Nicolet Nexus 470 FT-IR spectrometer. 1D and 2D NMR spectra were recorded on a Bruker Avance 400 NMR spectrometer (400 MHz for 1H and 100 MHz for 13C, respectively). Chemical shifts were referenced to the solvent peaks at δH 2.50 and δC 39.8 for dimethyl sulfoxide (DMSO-d6), respectively, and coupling constants were in Hz. ESIMS and HRESIMS spectra were obtained from a Thermo Scientific LTQ Orbitrap XL instrument. Column chromatography was carried out with silica gel (160–200 mesh, 200–300 mesh), and HF254 silica gel for TLC was obtained from Qingdao Marine Chemistry Co. Ltd. (Qingdao, China), ODS gel (50 μm), and Sephadex LH-20 (18–110 μm) were obtained from YMC (Kyoto, Japan) and Amersham Pharmacia Biotech AB, Uppsala, Sweden. HPLC chromatography was performed on an Alltech instrument (426-HPLC pump), equipped with an Alltech UVIS-200 detector and semipreparative reversed-phase columns (Grace Prevail C18, 5 μm, 250 mm × 10 mm). Analytical HPLC chromatography was performed on Prominence LC-20AD (Shimadzu, Kyoto, Japan) equipped with pump LC-20AD, detector Prominence SPD-M20A PDA and Shimadzu VP-ODS column (150 mm × 4.6 mm), Thermo BDS Hypersil C18 column (150 mm × 4.6 mm, 5 μm).
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9

Molecular Weight Analysis of PEG/PEO

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SEC analysis was performed using a Shimadzu Prominence LC-20AD (Shimadzu Corporation, Kyoto, Japan) system equipped with a UV (280 nm) and refractive index (RI) detector and a three-column sequence of Shodex KD802, KD803, and KD805. HPLC-grade N, N-dimethyl formamide (DMF) with 10 mM LiBr was used as the eluent, with a flow rate of 1.0 mL min−1 at 40 °C. Fluka polyethylene glycol/poly(ethylene oxide) standard ReadyCal sets (Sigma-Aldrich Japan G. K., Tokyo, Japan) were used for molecular mass calibration. The standard and samples were completely dissolved in the eluent and filtered through a 0.45 μm PTFE syringe filter (ADVENTEC) prior to injection to the system. Some of the GL400 samples treated at ≥120 °C did not dissolve completely, thus, the soluble portion was filtered and subjected to SEC analysis.
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10

HPLC Quantification of Tocotrienol Isomers

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A Shimadzu HPLC system equipped with a fluorescence detector (Prominence LC-20AD, Shimadzu, Kyoto, Japan) was used for the detection of tocotrienols. The separation was carried out with an isocratic flow of methanol/acetonitrile/dichloromethane (25:23:2, v/v/v) at a flow rate of 1 mL/min, and eluted through a reverse phase C18 column (250 × 4.6 mm, 5 µm, Phenomenex, Torrance, CA, USA). The temperature of the column was maintained at 30 °C and the injection volume was 25 µL. The excitation and emission wavelengths for the fluorescence detector were set at 290 and 330 nm, respectively.
Quantification of the three isomers of tocotrienols (α-, β-/γ-, and δ-) was done by referring to each of the external calibration curves (R2 ≥ 0.99) established for the individual isomer using the reference standard mixture. The standard solutions of 2 to 10 µg/mL were prepared through serial dilution of the standard mixture with acetonitrile. Tocotrienols content was calculated from the triplicate injections by using the linear calibration curves. The final content was expressed in µg/g sample. The entrapment efficiency of tocotrienols was calculated based on Equation (2) as follow:
where Tsample refers to the tocotrienols content in the sample, whilst Toil is the total tocotrienols amount in the oil (palm olein and TRF) added into the emulsion.
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