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12 protocols using sc 133256

1

Immunofluorescence Staining of Skin Barrier Proteins

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Immunofluorescence staining was performed as previously described [32 (link)]. To proceed with immunofluorescence staining, every section was probed with the following antibodies: anti-mouse Filaggrin (1:100; sc-80609 Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-rabbit ZO-1 (1:100; 61-7300 Invitrogen Waltham, MA, USA), and anti-mouse Occludin (1:100; sc-133256 Santa Cruz Biotechnology, Santa Cruz, CA, USA) at room temperature overnight. The day after, the secondary fluorescent antibodies Alexa Flour 488 goat anti-mouse and anti-rabbit IgG (A11001 and A11008; Invitrogen) were incubated for 3 h. Then, 4′,6′-diamidino-2-phenylindole (DAPI; Hoechst, Frankfurt, Germany) was added to sections for the nuclear staining. The sections were shown at 40× magnification using a Nikon Eclipse Ci-L microscope.
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2

Visualizing Akk OMV Uptake and Effects

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A volume of 100 μl of PBS containing Cy5.5-labeled Akk OMVs (0.1 mg/ml) was incubated with Caco-2 and HT-29-MTX-E12 cells for 24 hours at 37°C, respectively. The cells were washed three times with PBS and stained with Hoechst before visualizing uptake of OMVs under CLSM, respectively. Similarly, a volume of 100 μl of PBS containing Akk OMVs (0.1 mg/ml) was cultured with Caco-2 cells along with LPS (5 μg/ml) for 24 hours at 37°C. Then, the cells were processed for immunofluorescence staining, including occludin (sc-133256, Santa Cruz Biotechnology) and ZO-1 (AF5145, Affinity Biosciences), and then stained with Hoechst before CLSM observation. A volume of 100 μl of PBS containing Akk OMVs (0.1 mg/ml) was cultured with HT-29-MTX-E12 cells for 24 hours at 37°C. Then, the cells were processed for Alcian blue staining (C0155S, Beyotime Biotechnology).
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3

Analyzing Gut Barrier and Inflammation in Akk OMV-treated Mice

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The proximal colons were extracted from gut disorder mice 5 days after oral administration of Akk OMV suspension containing 20 μg of proteins by gavage. To analyze mucus barrier, the samples were processed for Alcian blue staining (C0155S, Beyotime Biotechnology) in accordance with the manufacturer’s instructions. Fiji (ImageJ) was used to quantitatively analyze the area of stained cells and the percentage of goblet cells in the intestinal epithelium. To analyze physical barrier, the samples were processed for immunofluorescence staining in accordance with the manufacturer’s instructions, including occludin (sc-133256, Santa Cruz Biotechnology) and ZO-1 (AF5145, Affinity Biosciences). Levels of cytokines including IL-10 (EK210/4, MultiSciences), IL-13 (EK213/2, MultiSciences), and ACE2 (EK1188, Boster Biological Technology) in colon tissue as well as IFN-γ (EK280/3, MultiSciences) and CRP (EK294/2, MultiSciences) in serum were measured by commercially available ELISA kits. To observe uptake of Akk OMVs by intestinal epithelial cells, a solution of Cy5.5-labeled OMVs (0.1 mg/ml) was injected into the intestinal segment tied at both ends and the treated mice were euthanized for collecting intestinal tissues 2 hours later. Then, the tissues were processed for CLSM observation.
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4

Probiotic Modulation of 5-FU-Induced Intestinal Injury

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Mice (Balb/c, male, 6–8 weeks, n = 5 mice/group) were randomly assigned to four groups and orally administered with EcN or EcN@SH (1 × 108 CFU/mouse/day) or PBS for 5 days. 5-FU (150 mg/kg mouse) was injected intraperitoneally once on day 3. At day 6, the mice were euthanized for sample collection. Healthy mice were used as a control. The intestinal length was measured. Serum samples were obtained by centrifugation at 4000×g for 5 min. The concentrations of TNF-α and IL-6 were detected using commercially available enzyme-linked immunosorbent assay (ELISA) kits (MultiSciences Biotech, China). The jejunal tissues were sampled for blinded histopathology analysis. Jejunal samples were fixed in 4% paraformaldehyde, processed according to standard procedures for paraffin embedding, sectioned at 4 μm, followed by hematoxylin and eosin (H&E) staining and myeloperoxidase (MPO) staining, as well as immunofluorescence staining of ZO-1 and Occludin. The used antibodies included anti-rabbit ZO-1 (1:300; AF5145, Affinity), anti-mouse occludin (1:300; sc-133256, Santa Cruz), goat anti-rabbit IgG (Alexa Fluor 594, 1:500; ab150080, Abcam) and goat anti-mouse IgG (Alexa Fluor 488, 1:500; ab150113, Abcam). Villi and crypts in each intestinal region were measured.
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5

Characterization of Human Colon Stem Cells

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The QualiCell® Human Colon Stem Cells‐XLC401 (#CSC‐C00314) and related maintenance media (#CM‐1339Z) were obtained from Creative Bioarray (Beijing, China). Antibodies specific for CLDN1 (sc‐166338), OCLN (sc‐133256), or ZO1 (sc‐33725) were obtained from Santa Cruz Biotechnology. Fluorescein isothiocyanate‐labeled dextran (FITC‐dextran, #46944) was obtained from Sigma.
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6

Immunostaining of Occludin for Monolayer Integrity

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To analyze the monolayer integrity at the cellular level, occludin, a membrane protein of the apical junctional complex was immunostained [54 (link)]. RPTECs were fixed in cold methanol for 15 min, permeabilized, and blocked with 5% bovine serum albumin (BSA) and 1% Triton X-100 in Tris-buffered saline (TBS; 50 mM Tris and 150 mM NaCl [pH 7.4]) for 15 min. Mouse monoclonal anti-occludin (1:50; sc-133256, Santa Cruz) was diluted in TBS containing 1% BSA and 0.1% Triton X-100, and anti-mouse Alexa 488 (1:100; Jackson ImmunoResearch #715-545-151) was used as a secondary antibody. The cells were counterstained with a 1:100 dilution of TO-PRO-3 (Invitrogen) to label the DNA. The compiled Z-stack images were acquired on a Leica TCS-SPE confocal laser scanning microscope after mounting with SlowFade Diamond Antifade Mountant (Invitrogen) using LEICA LAS AF acquisition software (Leica Microsystems).
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7

Immunostaining of Ovarian Follicles

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Follicles were fixed in 4% paraformaldehyde for 24 h at 4°C and dehydrated with graded ethanol, subsequently embedded in paraffin at 60°C, and sectioned with a thickness of 4 μm. H&E staining was performed according to a standard histological procedure [13 (link)]. Immunofluorescence or immunohistochemical staining (IF/IHC) was performed as previously reported [37 (link)]. The primary antibodies in IF/IHC are as follows: rabbit anti-caspase3 (1 : 100, ET1602-39), anti-cytochrome C (1 : 100, ET1610-60), anti-mitochondrion fusin 2 (1 : 100, ER 1802-23), anti-PI3K (1 : 100, Et1608-70), mouse anti-BAD (1 : 50, RT1067), anti-GRP75 (1 : 50, M1603-1, HuaBio, Hangzhou, China), rabbit anti-VLDLR (1 : 100, MAB2258), mouse anti-ER-α (1 : 200, NB300-560, Novus Biologicals, USA), anti-occludin (1 : 50, sc-133256, Santa Cruz Biotechnology Inc., Santa Cruz, USA), and anti-BrdU antibody (1 : 200, AB_2314035, G3G4; DSHB, Iowa (IA), USA). The fluorescence images of the slides were visualized using a fluorescence microscope (Olympus IX70, Tokyo, Japan). The results of IHC and H&E staining were observed under a microscope (Eclipse 80i, Nikon, Japan), and the images were photographed with a digital camera (DS-Fi1, Nikon, Japan).
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8

Cytokine and Tight Junction Modulation

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Adenine was obtained from Sigma-Aldrich Co. (St Louis, MO, USA) and was prepared freshly every day. Rat interleukin (IL)-6 (cat. no: CSB-E04640r) and IL-10 (cat. no: CSB-E04595r) enzyme-linked immunosorbent assay (ELISA) kits were purchased from Cusabio Technology LLC (Wuhan, Hubei, China). All immunohistochemical tests were performed using a commercial streptavidin-biotin kit (Thermo Fisher Scientific, USA) and aminoethyl carbazole (AEC) chromogen (Thermo Fisher Scientific, USA). Antibodies against superoxide dismutase (SOD) (sc-101523), glutathione peroxidase (GPx) (sc-133160), claudin-1 (sc-166338), and occludin (sc-133256) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA).
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9

Immunofluorescence Analysis of Tight Junction Proteins in Spinal Cords

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Adhesion and tight junction molecule expression assessments were performed as previously described7 (link) (Figs. 1A and 3E–T). Immunofluorescence was performed on spinal cords of HIIT Pre-EAE, SED Pre- EAE mice (n = 5/group) and naïve controls (n = 3) for VCAM-1 (monoclonal anti-mouse VCAM-1, sc-13160, 1:800, Santa cruz), ICAM-1 (monoclonal anti-mouse ICAM-1, sc-107, 1:200, Santa cruz), occludin (monoclonal anti-mouse occludin, sc-133256, 1:600, Santa cruz) and claudin-4 (monoclonal anti-mouse claudin-4, sc-376643, 1:800, Santa cruz). To identify blood vessels, sections were double stained with CD31 (rat anti-mouse CD31, 550274, 1:800, BD-Pharmingen) and nuclear counterstain was performed using DAPI. Ten microscopic field images (X40 magnification) of three sections in each spinal cord at 60 μm apart were captured as described above. Stained areas around blood vessels in each image were marked. Group average MFI ± SEM was calculated and reported as ratio to stained area in spinal cords of naïve mice. Measurements were performed by using the Image J software analysis (ver. 1.51H, NIH, USA).
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10

Histological analysis of liver and intestinal tissues

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For hematoxylin and eosin (H&E) staining, paraformalin-fixed paraffin tissue sections were used to evaluate the characteristics of liver and intestinal tissues regarding histological changes and fibrosis. The immunohistochemistry procedure was performed as described previously [27 (link)], including the following primary antibodies CHOP, GRP78, PDI, and XBP-1 (sc-7351, sc-166490, sc-74551, and sc-8015, Santa Cruz Biotech, USA). The positive areas of CHOP, GRP78, PDI, and XBP-1 were recorded. For immunofluorescence, the tissue sections were blocked with 10% normal donkey serum for 1 h at 25° C in PBS and then incubated overnight with primary antibodies against claudin-1, occludin, and ZO-1 (sc-166338, sc-133256, sc-33725, Santa Cruz Biotech, USA) and P-gp (ab261736, Abcam) at 4° C. The nuclei were stained with Hoechst 33258 (0.25 l g/mL) dye. All fluorescence images were captured on a Nikon ECLIPSE Ti microscope.
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