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2 protocols using nta v2

1

Adenovirus Propagation and Characterization

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SKOV3 (human ovarian carcinoma: ATCC® HTB-77 TM) cells were cultured in RPMI-1640 medium (Invitrogen, USA) supplemented with 2 mM L-glutamine (Invitrogen, Paisley, UK), 10% FBS (PAA Laboratories, Leonding, Austria) and 1% penicillin-streptomycin (Invitrogen, Paisley, UK) at 37 °C and 5% CO2. HEK-293 cells (human embryonic kidney: ATCC® CRL-1573 TM) were grown in MEM (Invitrogen, USA) with 2 mM L-glutamine, 10% FBS, 1 mM sodium pyruvate and 1% penicillin-streptomycin (Invitrogen, USA) at 37 °C and 5% CO2. Vectors (HAdV-5 luc and LacZ [β-galactosidase]; HAdV-5T* luc and LacZ containing the following mutations I421G, T423N, E424S, L426Y, E451Q in HVR7 and T270P and E271G in HVR5 showing reduced FX-binding capacity [8 (link)]) were propagated in HEK-293 cells and purified by CsCl gradient centrifugation [15 (link)]. Viral particles were determined by micro BCA assay (Life Technologies, Camarillo, CA, USA) using the formula 1 mg protein = 4 × 109 virus particles (vp). Laser-based nanoparticle tracking analysis (NTA) was used to characterize the size of adenoviral particles from pure preparations with Nanosight NTA v2.3 software in a NanoSight LM14 (Malvern Panalytical, Malvern, UK). Plaque forming units (pfu)/mL were calculated by end-point dilution assay [15 (link)]. The luc vectors were used for all the in vitro experiments, whereas LacZ vectors were used for the in vivo analyses.
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2

EV Characterization by Nanoparticle Tracking

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Nanoparticle tracking analysis (NTA) was used to determine particle size distribution and concentration of EV samples from RWPE1, CD9 low, CD151 high and WPE1-NB26 cell lines. Concentrated EV suspensions were diluted 1:1000 in PBS before introduction into the sample chamber of a Nanosight NS300 NTA system (Malvern, ATA Scientific, Taren Point, NSW, Australia) using a syringe pump (Harvard Apparatus, ATA Scientific) on a speed setting of 50. The NS300 was adjusted so that particles were in the focal plane and a scientific CMOS camera captured 3 × 60 s videos per sample. Post-acquisition analysis settings were kept constant between samples. Particle size distribution and concentration were determined using NTA v2.3 software (Malvern).
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