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6 protocols using irdye 800cw 2 dg optical probe

1

In Vivo 2-DG Tumor Imaging

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WT or 5-FU-R cell-bearing nude mice were injected with 10 nmol IRDye 800CW 2-DG Optical Probe (Li-Cor Biosciences) via the tail vein, and then imaged using an IVIS Kinetic (Caliper Life Sciences, USA) small animal imaging system with a cooled Hamamatsu ORCA-R2 camera (Hamamatsu, Japan) 24 h later. Probe signals were displayed as pseudo-colored bioluminescent images and merged with grey-scale white light images of the mice. Circular ROIs were drawn over the areas and quantified, and the results are reported as total radiant efficiency.
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2

Western Blot Analysis and Immunoprecipitation

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Western blot analysis was performed as described previously39 (link)40 (link). Image acquisition and quantitation of band intensity were performed using Odyssey infrared imaging system (LI-COR Biosciences, Lincoln, NE, USA). For immunoprecipitation, the cells were lysed in buffer (50 mM Tris·HCl, pH 8.0, 150 mM NaCl, 5 mM EDTA and 0.5% Nonidet P-40) and centrifuged at 16,000g for 30 min to remove debris. Cleared lysates were subjected to immunoprecipitation with antibodies. To measure 2-DG incorporation on PD-L1 protein, cells were incubated with IRDye 800CW 2-DG Optical probe (LI-COR Biosciences) for overnight, and then we performed immunoprecipitation. Uncropped scans of the most important western blots are shown in Supplementary Fig. 10.
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3

Non-Invasive Imaging of Tumor Glycolysis

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Aerobic glycolysis, characterized by high glucose uptake, of cancer cells generally is abnormally elevated to meet the requirements for survival and rapid growth.19 (link) Therefore, 2-DG, an analog of glucose, can be used to reflect the level of aerobic glycolysis in the tumor. Maximum absorption wavelength and maximum emission wavelength are 774 and 789 nm, respectively. Mice were injected with the IRDye® 800CW 2-DG optical probe (C71103-07, LI-COR Biosciences, USA) through the tail vein,20 (link) and scanned with a near-infra red fluorescence imaging system (Pearl, Li-COR Biosciences, USA) 14 h later. The fluorescence signal in the specified area was normalized analysis using Pearl Image Studio v3.1 software (Li-COR Biosciences, USA).
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4

Endothelial Cell Characterization Assay

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N-methyl-D-Aspartate (NMDA), NMDA receptor inhibitor, MK801 (Tocris), PKC inhibitor, Staurosporine (Selleckchem), CaMKII inhibitor, KN-93 (Merck-Millipore) were purchased from manufacturers. Fluo-4 AM, AF594-conjugated Transferrin (Thermoscientific), FITC-ChromPure Mouse Transferrin (Jackson Immunoresearch), and IRDye 800CW 2-DG Optical Probe (Li-Cor) were purchased from manufacturers. Anti-GFAP (Cat# 12389S), NeuN (Cat# 24307S), Caveolin-1 (Cat# 3238) antibodies, Rab5 (Cat# 3547S) were purchased from Cell Signaling Technology. Anti-CD31 antibody (Cat# 550,274, BD Bioscience), Anti-Glucose transporter 1 (GLUT1, Cat# MA1-37,783, Invitrogen), Clathrin Heavy Chain antibodies (Cat# MA1-065, Invitrogen), Anti CD13 (Cat# ab7417, Abcam), and LAMP1 (Cat# sc20011, Santa Cruz Biotechnology) were purchased from respective manufaturer. Dilutions for all antibodies were 1:500. Human primary brain endothelial cells were purchased from Cell Systems (Cat # ACBRI 376). Cells were isolated from microvessels from brains of normal, healthy donor and are positive for CD31, vWF. Experiments were done cells with passage number less than 8 for the maintenance of their properties.
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5

Imaging Tumor Growth in Humanized Mice

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All experimental procedures were conducted in accordance with the Federation of Laboratory Animal Science Associations (FELASA) and were approved by the Bar-Ilan University animal care and use committee in Israel #27-04-2015. A total of 1 × 106 Huh7.5 cells infected with HCV HJ3-5 virus or non-infected control cells were administered into 6-week-old NOD-SCID-gamma (NSG) male mice by intrahepatic injection into the left lobes of the liver. At four weeks following tumor cell injection, an IRDye 800CW 2-DG optical probe (LI-COR Biosciences, Lincoln, NE, USA) was injected into the tail vein of tumor-bearing mice. Mice were imaged using the Pearl Trilogy small animal imaging system (LI-COR Biosciences). Fluorescent signals from acquired images were analyzed using the Image Studio Lite software (LI-COR Biosciences). At 2 and 4 weeks following injection, the left lobe and right lobes of the liver as well as lungs from each mouse were harvested, and DNA or RNA was extracted for further analyses.
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6

Quantifying Tissue Inflammation Using 2-DG Probe

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A substitute for glucose, 2-DG, is taken up by inflammatory tissue and can be quantitated using a near-infrared fluorescence imaging system (Pearl, Li-COR Biosciences, Lincoln, NE, USA). One hour after the intraperitoneal injection of LPS in mice, a 10 nmol IRDye 800CW 2-DG optical probe (C71103-07, LI-COR Biosciences, Lincoln, NE, USA) was injected into the tail vein. Twenty-four hours later, a small animal live imaging system was utilized to monitor inflammation in the mice [61 (link)]. The results of this section are displayed in the Supplementary Materials Figure S2.
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