The largest database of trusted experimental protocols

10 protocols using panc 1

1

Quantifying ITGB6 Expression in Pancreatic Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
A total of six pancreatic cancer cell lines (BXPC-3, CFPAC-1, MIA PaCa-2, ASPC-1, PANC-1 and SW1990) were provided by Shanghai GeneChem Co., Ltd. and cultured in RPMI-1640 basic medium (Corning, Inc.). All cells were routinely subcultured at 37˚C in the presence of 5% CO2 in an incubator with saturated humidity. Total RNA was extracted from the six cell lines using TRIzol reagent according to the manufacturer's instructions. RNA was reverse transcribed to complementary DNA using Promega M-MLV at 42˚C (Promega Corp.). The mRNA expression levels of the ITGB6 gene in different cell lines of interest were detected by quantitative PCR using a LightCycler 480 II (Roche Molecular Systems, Inc.). The composition of the reaction mixture was SYBR premix ex taq 6.0 µl, primer mix 0.3 µl, reverse transcription product 0.6 µl and RNase-free H2O 5.1 µl. The reaction conditions were as follows pre-denaturation at 95˚C for 30 sec, followed by denaturation for 5 sec at 95˚C and annealing for 30 sec at 60˚Cfor a total of 40 cycles. The primer sequences were as follows: ITGB6 forward, 5'-TGATCTTCGCTGTAACCC-3' and reverse, 5'-CAGACCGCAGTTCTTCATA-3'; GAPDH forward, 5'-TGACTTCAACAGCGACACCCA-3' and reverse, 5'-CACCCTGTTGCTGTAGCCAAA-3'. The experimental results were analyzed by the 2-∆∆Cq method (23 (link)) for relative quantitative analysis.
+ Open protocol
+ Expand
2

Isolation of Pancreatic CSCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
BXPC-3, PANC-1 and SW1990 (all from Shanghai Genechem Co., Ltd., Shanghai, China) pancreatic cancer cell lines were cultured at 37°C in an atmosphere containing 5% CO2 in RMPI-1640 (Hyclone; Thermo Fisher Scientific, Inc.) or DMEM, supplemented with 10% FBS. Subsequently, CD44+CD24+ cells were sorted from the three cell lines using flow cytometry as previously described (19 (link),20 (link)).
+ Open protocol
+ Expand
3

Cell Culture of Pancreatic Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human pancreatic cancer cell lines (PANC-1, SW1990, COLO357 and CF-PAC1) and the human pancreatic ductal cell line (HPDE) were purchased from GeneChem (Shanghai, China). Cells were cultured in Dulbecco's modified Eagle's medium (DMEM) (Gibco, Thermo Fisher Scientific, Waltham, MA, USA) was supplemented with 10% fetal bovine serum (FBS) (Gibco, Thermo Fisher Scientific, Waltham, MA, USA) and 1% penicillin and streptomycin (Solarbio, Beijing, China), and they were maintained in a 37 incubator containing 5% CO 2 . The medium was replaced every 24-48 h according to the cell density. Cells were observed under an inverted microscope and were digested with 0.25% trypsin (Gibco, Thermo Fisher Scientific, Waltham, MA,USA) to enable passaging of the cells when they reached 80% confluence.
+ Open protocol
+ Expand
4

Culturing Pancreatic Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
A normal human pancreatic ductal epithelial cell line was purchased from RiboBio Co., Ltd. (Guangzhou, China), and the PDAC cell lines SW1990 and PANC-1 were purchased from Shanghai GeneChem Co., Ltd. (Shanghai, China). SW1990 and PANC-1 cells were cultured in DMEM (Gibco Company, USA). HPDE6C7 cells were cultured in MEM medium (Gibco, USA). Both media contained 10% inactivated fetal bovine serum (Gibco, USA). All cells were incubated in an incubator at 37°C and 5% CO2.
+ Open protocol
+ Expand
5

Validating human pancreatic cancer cell lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human pancreatic cancer cell lines MIA-PaCa2 and Panc-1 were purchased from GeneChem Co., Ltd (Shanghai, China) and cultured in DMEM supplemented with 10% fetal bovine serum (GIBCO, Carlsbad, CA, USA) at 37°C, in 5% CO2 atmosphere. The cell lines have been validated with their DNA profiles and compared with that of continuous cell lines available in the data bank through www.dsmz.de for authenticity. Calponin 2 overexpression lentivirus was bought from GeneChem Co., Ltd and used according to the manufacture's protocol. Small interfering RNA (siRNA) was designed by Biomics Biotechnologies Co., Ltd (Nantong, China) and transfections were performed using commercial reagent according to the manufacture's protocol (Qiagen, Germany). Three different siRNA duplexes targeting calponin 2 gene (NM_007725.2, Pubmed) were assessed to choose the most efficient one. Sequences of the siRNAs are as follows: 5′-GCACACUCAUGAACAAGCUdTdT-3′ (calponin 2 siRNA1), 5′-CGAGAAGGCAUCUCUAUGAdTdT-3′ (calponin 2 siRNA2), 5′-GGCACAUCUAUGAUACC AAdTdT-3′ (calponin 2 siRNA3). An unrelated siRNA was used as negative control.
+ Open protocol
+ Expand
6

Pancreatic Cancer Cell Line Cultivation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human pancreatic cancer cell lines (PANC‐1, SW1990, COLO357 and CF‐PAC1) and the human pancreatic ductal cell line (HPDE) were purchased from GeneChem (Shanghai, China). Cells were cultured in DMEM (Gibco, Thermo Fisher Scientific, Waltham, MA, USA) which was supplemented with 10% foetal bovine serum (Gibco, Thermo Fisher Scientific) and 1% penicillin and streptomycin (Solarbio, Beijing, China), and they were maintained in a 37℃ incubator containing 5% CO2. The medium was replaced every 24‐48 hours according to the cell density. Cells were observed under an inverted microscope and were digested with 0.25% trypsin (Gibco, Thermo Fisher Scientific) to enable passaging of the cells when they reached 80% confluence.
+ Open protocol
+ Expand
7

Culturing PDAC Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human PDAC cell lines (BxPC-3 and PANC-1) were purchased from Shanghai Genechem Co., Ltd. PANC-1 and BxPC-3 cells were cultured in DMEM (10-013-CVR, Corning) and RPM1-1640 cell culture medium (15-059-CVR, Corning), respectively, containing 10% fetal bovine serum (FBS, VS500 T, A11-102, Ausbian).
+ Open protocol
+ Expand
8

Pancreatic Cancer Cell Culture Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The study was conducted in accordance with the Declaration of Helsinki (as revised in 2013). Two human pancreatic cancer cell lines, ASPC-1 and PANC-1 (Genechem BioTECH, Shanghai, China) were cultured in the RPMI-1640 (HyClone) and DMEM (HyClone) media, respectively, at 37 °C in a humidified atmosphere with 5% CO2. The culture media consisted of fetal bovine serum (FBS, 10%, HyClone, Logan, UT, USA), streptomycin (100 μg/mL, Life Technologies, Grand Island, NY, USA) and penicillin (100 U/mL). In addition, apatinib was obtained from the Jiangsu Hengrui Medicine Co., Ltd. (Jiangsu, China).
+ Open protocol
+ Expand
9

Cultivation of Pancreatic Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human normal pancreatic ductal epithelial cell line (HPDE6‐C7) was purchased from Genio Biotechnology Co., Ltd. The human PDAC cell lines AsPC‐1, BxPC‐3, CFPAC‐1, PANC‐1, and SW1990 were purchased from Genechem Co., Ltd. These cells were cultured in complete growth medium (Gibco) containing 10% fetal bovine serum (HyClone) under humidified conditions with 95% air, 5% CO2 at 37°C according to the manufacturer's instruction.
+ Open protocol
+ Expand
10

Culturing Human Pancreatic Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
A human pancreatic duct epithelial cell line HPDE6 and PAAD cell lines (Capan‐2, Panc‐1, AsPC‐1, and BxPC‐1) were purchased from Genechem. Detailed descriptions of the methods are provided in Appendix S1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!