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4 protocols using pepsin from porcine mucosa

1

Quantitative Immuno-Blot Assay for Native Collagen I

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Cells were washed twice with phosphate buffered saline. Cell-associated collagen was solubilised by the addition of 0.5 M acetic acid (250 µl/well) and gentle agitation at 4 °C for 32 hours, before adding 0.1 mg/ml pepsin from porcine mucosa (Sigma-Aldrich) and continuing agitation for a further 16 hours. Pepsin digestion was then inhibited with 2 µg/ml pepstatin A (Sigma-Aldrich). Cell samples were stored at -80 °C until assayed. A novel quantitative immuno-blot assay for native collagen I was developed and validated by Western blot analysis of TGFβ-activated NHDF cells and supernatants (Supplementary Fig. S1). Standards (0.625–10 ng calf skin collagen I, Sigma Aldrich) and samples (100 µl) diluted with PBS (acid-soluble cell fraction, 1:10, and supernatants, 1:20), were loaded onto nitrocellulose membrane using a vacuum manifold to create protein dots. Blots were dried, blocked with 5% dried skimmed milk powder and 2% Tween 20 in PBS and incubated overnight at 4 °C with rabbit anti collagen I antibody (Abcam, Cambridge, UK) at 200 ng/ml in block buffer. The blots were then incubated with 50 ng/ml goat anti rabbit-HRP antibody (Dako, Glostrup, Denmark) for 1 hour at room temperature. Blots were visualised using chemiluminescence (Thermo-Fisher, Waltham, USA).
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2

Decellularized Collagen Matrix Characterization

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Lyophilized DCM was minced to a fine powder using a razor blade. A 1 mg/mL solution of DCM was prepared using a 10 mg/mL solution of pepsin from porcine mucosa (Sigma) dissolved in 0.1 M of hydrochloric acid under constant gentle stirring for 72 hours. Aliquots of DCM solutions were stored at −20°C until use. DNA concentration in decellularized samples was tested using a PicoGreen dsDNA Assay Kit (Life Technologies) according to the manufacturer’s instructions. DCM solutions were diluted in 0.25% acetic acid and allowed to adsorb to 96-well cell culture plates for 24 hours. Adsorbed myeloperoxidase on tissue culture plastic was visualized using immunofluorescence with manufacturer recommended primary antibody dilutions (1:200, Abcam).
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3

Decellularized Porcine Liver ECM Preparation

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Livers were harvested from 3 to 4 month old female Yorkshire pigs, and were decellularized and digested as previously described [13 (link),30 (link),31 (link)] in a method initially developed by Freytes et al [32 (link)]. Briefly, tissues were minced into ~3 mm cubes and subjected to alternating washes of 1 mg/mL sodium dodecyl sulfate and ultrapure water. Decellualrized extracellular matrix (dECM) pieces were then lyophilized and milled into a fine powder and digested at 10 mg/mL dECM in 0.01 M HCl and 1 mg/mL Pepsin from porcine mucosa (Sigma) for 48 h. Pepsin digests were stored at −80 °C until further use.
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4

Purification and Assay of Vegetal Diamine Oxidase

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Vegetal diamine oxidase from Pisum sativum (Diamaze 1.2 U/mg protein) was from IBEX Pharmaceuticals Inc. (Montreal, QC, Canada) and kept at −80 °C. Monobasic and dibasic phosphate, 4-Aminoantipyrine (AAP), Sodium 3,5-dichloro-2-hydroxybenzenesulfonate (DCHBS), horseradish peroxidase (HRP), Putrescin, Ammonia assay kit, Bovine Serum Albumin (BSA), sucrose, trehalose, carboxymethyl cellulose (CMC), Mg stearate, pepsin from porcine mucosa (460 units/mg solid), and pancreatin from porcine pancreas (8X USP specifications) were purchased from Sigma Aldrich (Oakville, ON, Canada). The Bradford reagent was purchased from BioShop® (Burlington, ON, Canada). The Hydroxypropyl Methyl Cellulose (HPMC) K100 was gifted by Colorcon (Harleysville, PA, USA).
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