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6 protocols using rabbit anti human gapdh

1

Western Blot Analysis of YAP1 Expression

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Recombinant IL-6 protein (ab9627) and the anti-YAP1 antibody (ab52771) were purchased from Abcam (Cambridge, Massachusetts, USA). The horseradish peroxidase-labeled goat-anti-mouse/rabbit secondary antibody (K500711) was purchased from Dako (Glostrup, Denmark). Rabbit anti-human GAPDH (Sigma, St. Louis, Missouri, USA) was used for western blot analysis. An RNeasy Mini kit was purchased from Qiagen (Valencia, California, USA), and a SYBR Green Master Mix kit was obtained from TaKaRa (Dalian, China). RPMI-1640 medium and fetal bovine serum (FBS) were purchased from Gibco (Cambrex, MD).
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2

Glioblastoma Cell Culture and Invasion Assay

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The antibodies used include anti-human GAPDH (Sigma-Aldrich, Cat# HPA061280, RRID:AB_2684463), VE-Cadherin (Sigma, Cat# MABT134), CD97 (Abcam, Cat# ab108368), mouse FLAG (Cell Signaling Technology, Cat# 8146; RRID:AB_10950495), rabbit FLAG (Cell Signaling Technology, Cat# 14793), GAPDH (Thermo Fisher Scientific, Cat# AM4300, RRID:AB_2536381), rabbit anti-human GAPDH (Sigma-Aldrich, Cat#ZRB374), Ki67 (Thermo Fisher Scientific, Cat# RM-9106, RRID:AB_2341197). All secondary antibodies were conjugated to Alexa Fluor dyes purchased from Jackson Immuno Research. Growth factor–reduced Matrigel matrix, (Corning, Cat# 354230), chondroitin sulfate (#230699), and hyaluronic acid (H7630) were used for invasion assay at specified concentrations. To culture primary GBM cells, vessels were coated with 0.1 mg/ml poly D-lysine hydrobromide (Sigma, Cat# P7886) and 0.01 mg/ml laminin (Corning, Cat# 354232). HUVEC cells (Lonza, Cat# C2519A) were cultured in flasks coated with 0.1% gelatin (Sigma, Cat# G9391). HUVEC authentication was done by the supplier with double immunostaining for CD31/CD105 markers and was more than 90% positive. Cells were lifted with either cell stripper (Corning, Cat# 23-25-056-CI), accutase (Sigma, Cat# A6964), or TrypLE (Gibco, Cat# 1349171).
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3

Western Blot Analysis of DYNLRB2 Expression

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Protein expression levels of DYNLRB2 in transfected cells were confirmed by Western blot analysis. A549 transfected cells were harvested 48 h after transfection and extracted by lysis buffer with 0.01% protease inhibitor and phenylmethylsulphonyl fluoride. The cells were centrifuged at 12,000 rpm at 4 °C for 5 min to remove the supernatant. The protein concentration was measured using the BCA Protein Quantitation Kit (Thermo Fisher, MA, USA). Each 20 μL sample was added to 10% sodium dodecylsulfate-polyacrylamide gel electrophoresis. The polyvinylidene difluoride membranes were blocked for 2 h with 5% non-fat milk in Tris-buffered saline containing 0.05% Tween-20 (TBST) at room temperature. The membranes were further incubated with primary antibodies targeting rabbit anti-human DYNLRB2 (Sigma-Aldrich, St. Louis, MO, USA) (1:1,000) and rabbit anti-human GAPDH (Sigma-Aldrich, St. Louis, MO, USA) (1:1,000) at 4 °C overnight, then washed 5 times with TBST. The membranes were further incubated with horseradish peroxidase-conjugated secondary antibody (Bio-Rad, Hercules, CA, USA) (1:50,000) diluted in TBST. After washing, the membranes were reacted via enhanced chemiluminescence (ECL) solution (Bio-Rad, Hercules, CA, USA). Finally, the gel band intensity was analyzed by BandScan 5.0 software for protein concentration.
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4

Western Blot Analysis of IFIT2 Expression

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Rabbit polyclonal antibody against human IFIT2 (ab113112) was purchased from Abcam (Cambridge, MA, USA). The HRP-labeled goat anti mouse/rabbit secondary antibodies (K500711) were obtained from Dako (Glostrup, Denmark). Rabbit anti-human GAPDH used in Western blotting analysis was purchased from Sigma (St. Louis, MO, USA). The RNeasy Mini Kit was purchased from Qiagen (Valencia, CA, USA), and SYBR Green Master Mix kits were provided by TaKaRa (Dalian, China). RPMI-1640 and DMEM medium and fetal bovine serum (FBS) were purchased from Gibco (Cambrex, MD, USA).
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5

Quantifying Claudin-4 Protein Expression

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To determine levels of claudin-4 protein expression, tumor cells were scraped from culture plates in presence of lysis buffer (30 mM Tris HCl pH7.4, 150 mM NaCl, 1% TritonX-100, 10% glycerol, 2 mM EDTA, 0.57 mM PMSF, 1X cOmplete™ Protease Inhibitor Cocktail), placed on a shaker for 10 minutes and spun at 13,000 rpm for 10 minutes. Supernatant was collected and 20 ug of total protein was denatured, resolved on 10% SDSPAGE, and transferred to a polyvinylidene difluoride (PVDF) membrane (Bio Rad, Hercules, CA, USA). Membranes were blocked with 5% nonfat dry milk in Tris-buffered saline with 0.1% Tween-20 (TBST) for one hour at room temperature (RT) before treatment with either rabbit anti-human claudin-4 (1:500, Invitrogen), mouse anti-human claudin-4 (1:500; Invitrogen), or rabbit anti-human GAPDH (1:10,000; Sigma) overnight at 4°C. Membranes were then washed 4 times with TBST for 15 minutes before treatment with horseradish peroxidase-conjugated goat anti-rabbit (1:10,000; GE Healthcare, Buckinghamshire, UK) or goat anti-mouse (1:10,000; Jackson ImmunoResearch Laboratories, West Grove, PA, USA) antibodies for 1 hour at room temperature. Membranes were washed with TBST as described above and then visualized using an ECL Prime Western Blotting Detection Reagent (GE Healthcare) and X-ray film (CLXPosure Film, Thermo Scientific, Rockford, IL, USA).
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6

Protein Expression and Analysis Protocol

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The rabbit anti-human IFIT2 polyclonal antibody (ab113112, diluted in 1: 80) was purchased from Abcam (Cambridge, MA, USA). The HRP-labeled goat anti mouse/rabbit secondary antibodies (K500711) were obtained from Dako (Glostrup, Denmark). In addition, rabbit anti-human GAPDH (Sigma, St. Louis, MO, USA) was used for Western blotting analysis. The RNeasy Mini Kit was supplied from Qiagen (Valencia, CA, USA), and SYBR Green Master Mix kits were provided by TaKaRa (Dalian, China). RPMI-1640 medium and fetal bovine serum (FBS) were purchased from Gibco (Cambrex, MD, USA).
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