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17 protocols using dmem low glucose

1

Hepatocyte Differentiation from HLSC

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HLSC were differentiated into hepatocyte-like cells using a modified version of a previously described protocol (Herrera et al., 2013 (link)). Briefly, 5 × 106 cells were resuspended in 10 mL of differentiation media composed of: 60/40 (v/v) mixture of low glucose DMEM (without phenol red, Euroclone) and MCDB-201 (without phenol red, Cell technologies, Lugano, Switzerland), supplemented with 2% FCS (Thermo Fisher Scientific), 0.026 g/mL ascorbic acid 3-phosphate, linoleic acid-bovine serum albumin (LA-BSA), insulin-transferrin-selenium (ITS) (all from Sigma), 10 ng/mL rhFGF4 and, 10 ng/mL rhHGF (both from Miltenyi) (Herrera et al., 2013 (link)). Cells were inoculated in the rotary vessels (Synthecon, Houston, TX, United States) and rotated at 8 rpm/min in a clockwise direction. After 1, 4, 7, and 10 days of culture, the supernatant, including the cell aggregates, was centrifuged at 300 g for 5 min. The supernatants were collected, aliquoted and stored at −20°C, while the HLSC aggregates were washed once with PBS and used for the different experiments.
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2

Inducible NSC34 Motor Neurone Model

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Immortalized mouse motor neurone cell line NSC34 (54 (link),55 ) is routinely cultured in our laboratory (45 (link),46 (link),56–65 (link)). Cells were plated at 80,000 cells/well in 12-well multiwell plates for Western Blot (WB) and Filter Retardation Assay (FRA) analysis; for immunohistochemistry analysis, cells were plated at 35,000 cells/well in 24-well multiwell plate with coverslips. 24 h after plating, the cells were transiently transfected with lipofectamine (Life Technologies Corporation)/transferrin (Sigma-Aldrich), following the manufacture’s instructions (1 μg of plasmid DNA, 4 μl of transferrin solution and 2 μl of lipofectamine per well of 12-well multiwell plate). Inducible stably-transfected GFP-TDPs-NSC34 cell lines were obtained by transiently transfecting a TR4 NSC34 cell line (66 (link),67 (link)), kindly provided by Dr. E. Garattini (Mario Negri Institute, Milan, Italy), with pcDNA5/TO-GFP-TDPs plasmids and selecting positive clones with 200 μg/ml hygromycin for 3 weeks. GFP-TDPs-NSC34 selected clones were cultured in low-glucose DMEM (Euroclone, Pero, Milan, Italy) supplemented with 5% of tetracycline-free serum (Euroclone), 100 μg/ml hygromycin (Euroclone) as described in Locatelli et al. 2012 (66 (link)). For FRA analyses, cells were plated at 70,000 cells/well in 12-well multiwell plate and induced with 1 μg/ml doxycycline for 72 h.
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3

Isolation and Characterization of Human Tumor Endothelial Cells

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A human TEC was established and cultured in EndoGRO basal complete medium (Merck Millipore, Burlington, Massachusetts, USA) plus 10% fetal bovine serum (FBS). Briefly, TECs were isolated from renal clear-cell carcinomas and were characterized as endothelial cells by morphology, positive staining for von Willebrand factor (vWF) antigen, CD146, CD105, and vascular endothelial-cadherin and negative staining for desmin and cytokeratin, as previously described.60 (link) Human hepatocellular carcinoma cell line HepG2 was purchased from ATCC (American Type Culture Collection, Manassas, Virginia, USA) and maintained in culture in low-glucose DMEM (EUROCLONE, Milan, Italy) containing 10% FBS.
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4

Adipose-derived MSCs Glucose Adaptation

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Human adipose-tissue derived MSCs (hAD-MSCs) were commercially purchased from Lonza (Cat# PT5006, Lot# 21TL138912) and expanded using Dulbecco’s Modified Eagle’s Medium low glucose (DMEM-low glucose, Euroclone), which contained 5.6 mmol/L glucose and were supplemented with 10% fetal bovine serum (FBS, Gibco)[19 (link)], 0.1 mg/mL streptomycin and 100 units/mL penicillin G in standard cell culture incubators (5% CO2/95% air; 37 °C). Medium was changed every 72 h and cells were sub-cultured when confluence exceeded 60%. For high glucose conditions, cells were cultured in DMEM high glucose (DMEM-High Glucose, Euroclone) which contained 25 mmol/L glucose and were supplemented with 10% FBS, 0.1 mg/mL streptomycin and 100 units/mL penicillin G for 5 d in standard cell culture incubators (5% CO2/95% air; 37 °C). High glucose complete medium was changed every 72 h. For the preparation of the high glucose media, we followed a previously reported protocol[20 (link),21 ]. MSCs that were cultured in low glucose were considered as our study control. MSCs of passage 6 (P6), P8, and P10 were used to perform the experiments.
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5

Culturing Human Cancer Cell Lines

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Human multiple myeloma RPMI 8226 cells were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum, 1% l-glutamine, and 1% penicillin and streptomycin (Euroclone, Italy). Human glioblastoma U87-MG cells were cultured in Dulbecco's modified Eagle's medium (DMEM) low glucose supplemented with 10% fetal bovine serum, 1% l-glutamine, and 1% penicillin and streptomycin (Euroclone, Italy). Cells were incubated in a humidified incubator at 37°C and 5% CO2. A stock solution of all compounds in dimethyl sulfoxide (DMSO) (50 mM) has been prepared and then directly diluted in culture medium.
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6

Isolation and Characterization of Murine Renal Tubular Epithelial Cells

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Bone marrow MSCs were purchased from Lonza (Basel, Switzerland) and cultured in a mesenchymal stem cells basal medium bullet kit (Lonza). MSCs were used for the different experiments until passage 6 and expressed the typical MSC markers (CD105, CD29, CD73, CD44 and CD90) (not shown).
MSC-EVs, used as control (EV-CTRL), were obtained by ultracentrifugation, as described in Reference [6 (link)]. Briefly, EVs were obtained from supernatants of MSCs cultured overnight in (Roswell Park Memorial Institute (RPMI) medium. After removal of cell debris and apoptotic bodies by centrifugation at 3000× g for 20 min, EVs were purified by 2 h ultracentrifugation at 100,000× g at 4 °C. EVs from control MSCs or from modified MSCs were used freshly or stored at −80 °C after resuspension in RPMI supplemented with 1% dimethyl sulfoxide (DMSO, Sigma, St. Louis, MO, USA).
Murine renal tubular epithelial cells (mTECs) were obtained as previously described [20 (link)] and cultured in Dulbecco’s Modified Eagle Medium (DMEM) low glucose (Euroclone, Pero, Italy) supplemented with 10% fetal calf serum (FCS, Euroclone), penicillin (50 IU/mL), and streptomycin (50 µg/mL) (Sigma). Murine TECs were characterized for positive staining to cytokeratin, alkaline phosphatase and aminopeptidase A, and for negative staining for endothelial (von Willebrand factor), hematopoietic (CD45) and glomerular (nephrin) markers.
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7

Cell Culture and Transfection Protocols

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HeLa cells were routinely cultured in Dulbecco’s Modified Eagle’s Medium (DMEM) low glucose (Euroclone), supplemented with 10% Fetal Bovine Serum (FBS), 100 U/ml Penicillin and 100 μg/ml Streptomycin. SH-SY5Y cells were routinely cultured in Dulbecco’s Modified Eagle Medium: Nutrient Mixture F-12 (DMEM/F-12) (Gibco), supplemented with 10% FBS, 100 U/ml Penicillin and 100 μg/ml Streptomycin. The day before the experiment, cells were seeded at 105 cells per well in six-well plates or in glass bottom dishes (WillCo-dish) or at 104 cells per well in 4- and 8-well formats Chamber Slides (Lab-Tek). DNA transfection in HeLa cells was carried out using Effectene transfection reagent (QIAGEN) according to manufacturer’s instructions. DNA transfection in SH-SY5Y cells was carried out using Lipofectamine 2000 transfection reagent (Thermo Fisher Scientific) according to manufacturer’s instructions.
SH-SY5Y were differentiated with 10 μM retinoic acid (RA) (Sigma-Aldrich) for 3 days.
Primary hippocampal neurons were obtained from postnatal day (P) 0 B6/129 mice as previously described (Siano et al., 2019 (link)). At 48 h after plating cells have been transfected with Lipofectamine 2000 according to manufacturer’s instructions.
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8

Isolation and Culture of MSCs from BM

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A density gradient centrifugation (Ficoll 1,077 g/ml; Lympholyte, Cedarlane Laboratories Ltd., The Netherlands) was performed to collect mononuclear cells (MNCs) from NB patients and HC BM samples. MNCs were then washed twice in saline phosphate buffer (PBS, Euroclone Spa, Pero, MI, Italy) and seeded at a density of 160,000/cm2 in DMEM low glucose (Euroclone Spa, Pero, MI, Italy), 10% FBS (Gibco, Life Technologies Ltd, Paisley, UK), 2 mmol/L-glutamine and 100 g/mL penicillin-streptomycin (Euroclone Spa, Pero, MI, Italy). After at least 36 h, non-adherent cells were removed and the culture medium was replaced twice a week. MSCs were then harvested, after reaching ≥80% confluence, with a Trypsin solution (Euroclone Spa, Pero, MI, Italy) and then transferred to a new flask at a concentration of 4,000 cells/cm2 for the subsequent passages (P). All MSCs obtained were confirmed negative for mycoplasma by routine testing performed once every month.
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9

Culturing Human Cancer Cell Lines

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Human multiple myeloma RPMI 8226 cells were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum, 1% L-glutamine and 1% penicillin and streptomycin (Euroclone, Italy). Human glioblastoma U87-MG cells were cultured in DMEM low glucose supplemented with 10% fetal bovine serum, 1% L-glutamine and 1% penicillin and streptomycin (Euroclone, Italy). Cells were incubated in a humidified incubator at 37 °C and 5% CO2. A stock solution of all compounds in DMSO (50 mM) was prepared and then directly diluted in culture medium.
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10

Establishing Rhabdomyosarcoma Cell Lines

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The cell line was derived from the fresh tumor obtained from the surgery performed after 3 courses of neoadjuvant chemotherapy. This was established by mechanical disaggregation of the aseptic surgical sample, after three washes in saline solution. Small fragments of tissue were seeded in 24-well plates at high dilution. The culture medium used was DMEM low glucose (Euroclone) supplemented with 20% fetal bovine serum (FBS, Gibco), 2 mmol/L l-glutamine (Euroclone) and 100 g/mL penicillin-streptomycin (Euroclone). Cells were maintained at 37 °C in an atmosphere containing 5% CO2. When a confluence of spread cells from fragments of tissue was reached, cells were carefully detached and passed in new flasks. Cells were monitored daily to evaluate growth and morphology, and they were carefully detached and re-seeded upon reaching confluence. The RH30 cell line was maintained in RPMI 10% FBS, 2 mmol/L l-glutamine (Euroclone), and 100 g/mL penicillin-streptomycin (Euroclone), whereas the RD18 cell line was cultured in DMEM high glucose 2 mmol/L l-glutamine (Euroclone) and 100 g/mL penicillin-streptomycin (Euroclone). Cell line authentication was achieved by using short tandem repeat (STR) DNA fingerprinting (Eurofins Medigenomix, Ebersberg, Germany), and cells were regularly tested for mycoplasma-free infection.
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