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Lipofectamine tm 2000 transfection kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

Lipofectamine TM 2000 transfection kit is a lipid-based reagent designed for efficient delivery of nucleic acids, such as DNA and RNA, into eukaryotic cells. The kit provides a simple and effective method for transfection, facilitating the introduction of genetic material into target cells.

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17 protocols using lipofectamine tm 2000 transfection kit

1

Osteosarcoma Cell Characterization and Radiotherapy

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Osteosarcoma cell MG-63 and U2-OS were purchased from Shanghai Cell Bank of Chinese Academy of Sciences, and osteosarcoma tissue before and after radiotherapy was obtained from local Cancer Hospital. Fetal bovine serum and DMEM (dulbecco’s modified eagle medium) culture were purchased from Gibco, USA; RNA extraction kit, reverse transcription kit and qRT-PCR (Quantitative Real-time Polymerase Chain Reaction) kit were purchased from Takara, Japan; LipofectamineTM 2000 transfection kit was purchased from Invitrogen, USA; MTT (3-(4,5)-dimethylthiahiazo (-z-y1)-3,5-di- phenytetrazoliumromide) kit, Annexin V-FITC kit and propidium iodide (PI) kit, dual luciferase reporter gene assay kit were purchased from Beyotime Biotech Inc., Shanghai; Dimethyl sulfoxide (DMSO), BCA kit, RIPA protein lysate, and SDS-PAGE kit were purchased from Sigma; Co60 medical irradiation device was purchased from Nuclear Power Institute of China.
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2

Lipofectamine-Mediated Transfection Protocol

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The cells were inoculated in 6-well plates with 5.0×105 cells per well and incubated at 37°C and 5% CO2 for 24 hours. Sequence transfection was carried out in strict accordance with the instructions of the lipofectamineTM2000 transfection kit (Invitrogen; Thermo Fisher Scientific, Inc.) for 48 h.
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3

Rpph1 Silencing and Radiotherapy in Esophageal Cancer

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Grouping of transfection: Blank control group (not transfected), empty vector negative control group (siRNA-NC), Rpph1-silenced group (siRNA-Rpph1), empty vector combined with radiotherapy group (siRNA-NC + IR), Rpph1-silenced combined with radiotherapy group (siRNA-Rpph1 + IR). When the adherent growth of esophageal cancer cells from the TE-1 and Kyse150 lines reached 80%-90%, the transfection was carried out according to the manual of the LipofectamineTM 2000 transfection kit (Invitrogen). After 6 h of transfection, cell culture was performed in a new medium containing 10% fetal bovine serum. Cell transfection efficiency was measured by qRT-PCR. After 24 h of transfection, X-ray irradiation treatment was performed before subsequent experimentation.
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4

Deciphering miR-223 Regulatory Network in 293T Cells

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Through online prediction software Starbase (http://starbase.sysu.edu.cn/) and TargetScan (http://www.targetscan.org/vert_72/), the binding sequence of miR-223 and MINCR and the binding sequence of miR-223 and 3’-untranslated region (3’UTR) of ZEB1 were predicted. The wild type (WT) plasmid and mutant type (MT) plasmid containing the binding sequence of MINCR and miR-223, the WT plasmid and MT plasmid containing the binding sequence of miR-223 and ZEB1 3ʹUTR were synthesized by Sangon Biotech (Shanghai) Co., Ltd (Shanghai, China). The synthesized plasmids were respectively inserted into pCMV-REPORTTM luciferase reporter vectors (Thermo Fisher Scientific Inc., Waltham, MA, USA). LipofectamineTM 2000 transfection kit (Invitrogen Inc., Carlsbad, CA, USA) was employed to co-transfect lncRNA MINCR with ZEB1 WT plasmid, ZEB1 MT plasmid, miR-223 mimic and miR NC into 293T cells. Twenty-four hours later, cells were lysed and luciferase activity was detected with Dual-Luciferase Reporter Assay System (Promega Corporation, Madison, Wisconsin, USA).
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5

Modulation of SNHG7 and miR-186 in Cells

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SNHG7 low expression vector (si-SNHG7), SNHG7 overexpression vector (sh-SNHG7), miR-186 low expression vector (miR-186-inhibitor), miR-186 overexpression vector (miR-186 mimic), Gal-1-SNHG7 wild type (wt), Gal-1-SNHG7 mutant (mt), and their corresponding control vectors LNC-NC, miR-NC, and Gal-1-NC were designed and synthesized by ThermoFisher Scientific Co., Ltd., Shanghai, China. The cells were digested with trypsin 24 hours before transfection, and transfected with the above expression vectors when the cells reached 80% confluence. Specific procedures were conducted by referring to the kit instructions, and the culture medium was replaced every 6 hours during the 48 hours of culture in a 5% CO2 incubator at 37°C. Quantitative real-time polymerase chain reaction (QRT-PCR) was utilized to detect the transfection results. The cells without any intervention were assigned into the blank group. Lipofectamine TM2000 transfection kit was purchased from Invitrogen Company (Carlsbad, CA), with the Cat. No. 35050.
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6

Modulating Circular RNA in Human BMSCs

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The sequences for the siRNA targeting circ_0003865 were sense: 5′-AGUUACACAGAUUCAGAUCCAUU-3′, antisense: 5′-AAUGGAUCUGAAUCUGUGUAACU-3′; its negative control, sense: 5′-UUCUCCGAACGUGUCACGUTT-3′, antisense: 5′-ACGUGACACGUUCGGAGAATT-3′; the miR-3653-3p mimics, sense: 5′-CUAAGAAGUUGACUGAAG-3′, antisense: 5′-UCAGUCAACUUCUUAGUU-3′; and mimics NC (the same as negative control); the miR-3653 inhibitors: 5′-CUUCAGUCAACUUCUAG-3′ and inhibitor NC: 5′-CAGUACUUUUGUGUAGUACAA-3′. All oligos were synthesized by the GenePharma Biotech company (Shanghai, China). As designated, the above sequences were transfected into human BMSCs using the Lipofectamine TM 2000 transfection kit (Invitrogen, USA) according to the manufacturer’s instructions. For overexpression of circ_0003865, the sequences of circ_0003865 were synthesized and ligated into the LV5 plasmid to construct the recombinant LV5-circ_0003865 vector. LV5 and LV5-circ_0003865 lentiviruses were packaged by the Vigene Biosciences company (Jinan, Shandong, China) and infected into BMSCs according to the manufacturer’s instructions.
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7

Transfection of FGF1 Expression Vectors

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All expression vectors were designed and synthesized by Shanghai Gene Pharma Co., Ltd., including miR-21 mimics, si-FGF1, sh-FGF1, pmirGLO-FGF1-3′UTR wild type (Wt), pmirGLO-FGF1-3′UTR mutant type (Mut), and blank vector, pmirGLO-NC. At 24 h before transfection, the cells were digested with trypsin, and then, the cells were transfected with expression vectors when the cell fusion reached about 80% according to specific operation steps in the kit instructions. Subsequently, the cells were cultured in an incubator with 5% CO2 at 37°C for 48 h, and the culture medium was replaced every 6 h. Quantitative real time polymerase chain reaction (qRT-PCR) was adopted to determine the transfection results. Cells not transfected were used as a control group. The Lipofectamine TM2000 transfection kit (item number: 35050) was purchased from the Invitrogen Company in the United States.
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8

Ovarian Cancer Cell Line Characterization

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Human ovarian cancer epithelial cell line OVCAR3 and human normal ovarian epithelial cell line IOSE80 were purchased from ATCC cell bank in the United States. Cell culture reagents (DEME medium, fetal bovine serum, streptomycin penicillin, trypsin) were purchased from Gibco, USA. Cell proliferation activity assay Kit CCK-8 was purchased from Tongren Institute of Chemistry, Japan. miRNA extraction kit, miRNA reverse transcription and fluorescence quantitative kit, and Lipofectamine TM 2000 transfection kit were all purchased from Invitrogen, USA. Mir-30b-3p, mimics and mimic control miRNAs were synthesized by Shanghai Gemar Pharmaceutical Technology Co., LTD., China. Mir-30b-3p and U6 primers were designed and synthesized by bioengineering (Shanghai) Co., LTD., China. ECL chemiluminescence reagent and BCA protein concentration detection kit were purchased from Shanghai Biyuntian Biotechnology Co., LTD., China. The dual luciferase report detection system is the product of Promega, USA.
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9

Transfection and Apoptosis Analysis

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Lipofectamine TM2000 transfection kit (Invitrogen Company, United States, item number: 35050); TRIzol kit (Invitrogen Company, United States, item number: 15596018); EasyScript One-Step RT-PCR SuperMix kit (Beijing TransGen Biotech, China, item number: AE411-02); RIPA kit, bicinchoninic acid (BCA) protein kit, and electrochemiluminescence (ECL) kit (Thermo Scientific™, item numbers: 89901, 23250, and 35055); rabbit anti-FOXO3 polyclonal antibody and goat anti-rabbit immunoglobulin G (IgG) secondary antibody (monoclonal antibody) (Abcam Company, United States, item numbers: ab58518 and ab6721); cell counting kit- 8 (CCK8) kit (Beijing Beyotime Biotechnology, China, item number: C0037); Annexin V-FITC/PI apoptosis determination kit (Invitrogen Company, United States, item number: V35113).
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10

Dual-Luciferase Assay for miR-3653-3p Targets

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The interactions between miR-3653-3p and circ_0003865 or the 3′ UTR region of the GAS1 gene were verified using the Dual-Luciferase Reporter Assay System (Promega) according to the manufacturer’s instructions. Briefly, the circ_0003865 sequences and its mutant version, as well as the GAS1 3′ UTR sequences and its mutant version, were amplified by RT-PCR and were ligated into PmirGLO plasmids. The plasmids were transfected into 293T cells using the Lipofectamine TM 2000 transfection kit (Invitrogen, USA) according to the manufacturer’s instructions, along with miR-3653-3p mimics or a negative control. Subsequently, the cells were lysed using the Passive Lysis Buffer and analyzed using the GloMax-20/20 luminometer (#E5311; Promega). At least three biological replicates were conducted for comparison of luciferase activities between groups.
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