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13 protocols using uc90 camera

1

Immunofluorescence Assay for Tachyzoite and Bradyzoite Differentiation

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After 7 days, differentiated bradyzoites were confirmed with immunofluorescence assays using rabbit MAG1 antibodies as bradyzoite-specific markers and rabbit SAG1 antibodies as tachyzoite-specific markers. Both cell monolayers of Hs27 with tachyzoites or bradyzoites were washed with PBS and fixed with a formaldehyde solution (252549, Sigma–Aldrich) of 3.7% in PBS for 20 min. Next, the cells were blocked for 30 min with 10% FBS in PBS and permeabilized with 0.1% Triton-X100 for 15 min. The following monolayers were washed with PBS, and serum with anti-SAG1 or anti-MAG1 antibodies (1:500) was added for 30 min at 37 °C. Then, the cells were washed with PBS, and FITC-labeled goat anti-rabbit IgG (Bio–Rad Antibodies, Hercules, CA, USA) 1:100 was added for 30 min at 37 °C. Finally, the cells were washed with PBS, and tachyzoites or bradyzoites were visualized with a fluorescence inverted microscope at a magnification ×200 (IX50 microscope with UC90 camera, Olympus, Tokyo, Japan) using CellSens software (CellSens Standard 2.3, Olympus).
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2

Immunocytochemical Characterization of ECFCs

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For quality and purity control, each ECFC isolation was subjected to immunocytochemical characterization using antibodies against endothelial cell markers (CD31, von Willebrand factor (VWF)), fibroblast markers (CD90, TE-7) and muscle cell markers (smooth muscle actin (SMA), Desmin) as described previously.41 (link) In brief, cells were seeded on glass chamber slides (ThermoFisher Scientific) and fixed with acetone (Merck). TBE pH 8.0 (Gatt-Koller, Absam, Austria) with 0.1% Tween (Sigma-Aldrich) was used as rehydration and washing buffer. Primary antibodies (Supplementary Table 2) were applied for 30 min and visualization was performed with the Ultra Vision horseradish peroxidase Polymer Kit (ThermoFisher Scientific). Images were generated using a light microscope (Olympus BX53) with the UC90 camera (Olympus) and the corresponding cellSens Standard software (Olympus).
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3

Cartilage Staining of Xenopus Tadpoles

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Cartilage staining of Xenopus tropicalis tadpoles was performed according to Young et al. (2017) (link). Tadpoles were fixed in 4% PFA for 1 hour at room temperature then incubated in a solution of acid/alcohol containing 0.1% Alcian Blue. When staining was complete, tadpoles were washed in the acid/alcohol solution without Alcian Blue, bleached with a solution containing 1.2% hydrogen peroxide and 5% formamide and cleared in 2% KOH with increasing concentrations of glycerol. Representative tadpoles were embedded in a gelatin-based medium (0.5% gelatin, 30% bovine serum albumin, 20% sucrose, hardened with glutaraldehyde (75μl/ml) and vibratome sectioned at 50μm in the transverse plane. Mouse embryos were harvested at E14.5, fixed in Bouin’s fixative, stained in 0.05% Alcian blue solution in 5% acetic acid, washed and clarified in benzyl alcohol:benzyl benzoate solution. Whole-mount and sectional images were captured using an Olympus SZH16 stereomicroscope coupled with an Olympus UC90 camera.
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4

Histological Analysis of Gonadal Samples

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Gonadal samples were fixed in 10% formalin, processed, and embedded into paraffin blocks. The 3 µm serial sections were stained with hematoxylin and eosin. The slides were analyzed on an Axio Lab.A1 microscope (Carl Zeiss Microscopy, Jena, Germany) equipped with an Axiocam ERc5s digital camera (Carl Zeiss Microscopy, Jena, Germany) or on Olympus BX53 light microscope coupled with an Olympus UC90 camera.
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5

Barite-hosted Fluid Inclusion Analysis

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Barite-hosted fluid inclusions were analysed on double-polished wafers (0.2 mm thick) by using both Linkam FTIR600 stage mounted on the ZEISS AxioScope A1 microscope with magnification objectives of 10 × , 50 × , and 100 × , equipped with QImaging Micro Publisher 5.0 RTV camera and Linkam THMSG600 stage mounted on the Olympus microscope BX53 with magnification objectives of 5 × , 10 × , 20 × , 50 × , and 100 × equipped with Olympus UC90 camera. The first piece of equipment was available for studies at the Slovak Academy of Sciences in Banska Bystrica, the second at the Faculty of Geology, Geophysics and Environmental Protection AGH University of Science and Technology in Krakow. In both cases, the calibration of the stage was carried out using natural inclusions of pure CO2, and chemical compounds with known temperatures of phase transitions. The fluid inclusions were subjected to temperatures in the range from − 180 to + 250 °C. The heating runs were made at the rate of 5 °C/min until the final ice melting temperature was approaching.
Samples devoid of two-phase inclusions at room temperature were previously cooled at 5 °C for 24 h in the fridge and at 0.1 °C for several minutes in the freezing-heating stage to induce the vapor nucleation.
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6

Macroscopic and Microscopic Evaluation of Gastric Mucosal Damage

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The mucosal damage was measured using the macro- and microscopic examination. The stomach from each mouse was removed, opened along the greater curvature, and cleaned gently by dipping in normal saline. The severity of macroscopically visible changes in the mucous membrane was assessed using the semiquantitative 0–3 scale based on the previously described criteria taking into account the presence or absence of gastric erosions, ulcers, and their extent, described in detail in the legend of Table 1 [44 (link)]. Then, stomach specimens demonstrating macroscopic injury of the greater extent collected from each mouse pretreated with studied compound or reference drug, or equivalent stomach specimens from control mice, were selected for the histological assessment. Selected specimens were fixed in 4% buffered formalin, embedded in paraffin, and cut into 4 µm-thick slices, which were mounted on the glass slides and stained by the routine hematoxylin-eosin (H&E) method. Next, the microscopic analysis was performed using an Olympus BX53 light microscope combined with an Olympus UC-90 camera (Olympus, Germany). Histopathological changes of all stomach specimens were examined in a blinded way by the experienced pathologist using a 0–3 point scale.
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7

Thermal Decomposition of Zn/Fe Complexes

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An Olympus BX53M polarizing microscope (POM) equipped with a Linkam hot stage and an Olympus UC90 camera was used to observe the optical mesophase textures of complex Zn/Fe. Thermal decomposition was carried out using a TGA/SDTA 851-LF 1100 Mettler Toledo thermogravimetric analyser, with the experiments conducted in a nitrogen atmosphere in the temperature range of 25–800 °C with a heating rate of 10 °C min−1. Enthalpies and transition temperatures were recorded using a Q1000 apparatus from TA Instruments. The apparatus was calibrated with indium; three heating/cooling cycles were performed for each sample, with a heating and cooling rate of 10 °C/min.
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8

Homogeneity Analysis of Extruded Polymer

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To check whether extrusion increased the homogeneity of the materials, VHMWPE particles, which are suspended within—and are immiscible with—were tested in the polymer matrix. For this analysis, the extruded samples were cut by a Leica Rotation Microtome RM2265 into 12 µm-thick slices that were embedded in (Eukitt) resin between glass and cover slide. The resin was left to harden for 10 h, and then an Olympus SZX10 stereomicroscope equipped with a UC90 camera (Figure 3) was used to capture images at 10× and 20× magnification.
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9

Localization of Transglutaminase Activity

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Tissue samples were embedded in optimal cutting temperature (OCT) compound (Scigen Scientific, Gardena, CA, USA) and snap-frozen in liquid nitrogen. Cryosections of 6 µm thickness were cut with a cryostat (Leica CM3050S) and stored at −80 °C. Transglutaminase activity was localized with an in situ assay according to a published protocol [28 (link)], with minor modifications. Briefly, cryosections were incubated with 5 µM Alexa-fluor-555-cadaverine (Thermo Fisher, Waltham, MA, USA), a substrate of transglutaminases, in 0.1 M Tris-HCl pH 7.4 in the presence of 5 mM CaCl2 for 2 h. In negative control experiments, CaCl2 was replaced by 5 mM EDTA. The reaction was stopped by incubating the slides in 25 mM EDTA in PBS for 5 min. Nuclei were labeled with 1 µg/mL Hoechst 33258 (Molecular Probes, Eugene, OR, USA). The sections were mounted with Permafluor (Thermo Fisher, Waltham, MA, USA) and examined with an Olympus BX63 microscope. Photographs were taken with an Olympus UC-90 camera.
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10

Fluorescence Microscopy Imaging of Cellular Complexes

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Fluorescence light microscopy imaging was performed using an Olympus BX53 fluorescence microscope equipped with Olympus UC90 camera. The images were taken by staining the cells with DAPI (filter excitation: 360 nm, emission: 420-460 nm) for nucleus imaging, and a green filter (excitation: 470 nm, emission: 510-550 nm) for the complexes. The imaging glasses were sterilised and covered with a 0.1% gelatin solution in 12-well plate. After the gelatination, glasses were left in the laminar hood to dry. The cells were seeded in 60 × 103 cells per well in 0.75 mL per well. After 24 hours, the complexes were added in 10 µM final concentration and incubated for 4 hours. Then, cells were fixed with 10% formalin solution and treated with DAPI solution (1 µg mL -foot_1 ). After the treatments, the cells on the glass were transferred to glass slide and sealed with transparent nail Polish.
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