The largest database of trusted experimental protocols

30 protocols using tecnai 12 microscope

1

CRISPR-Gold Synthesis and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The synthetic intermediates in the synthesis of CRISPR-Gold, GNPs, GNP-DNA, GNP-DNA-donor DNA, GNP-Cas9 RNP and GNP-Cas9 RNP-Silicate were synthesized following the protocols described in S5 and characterized by UV-vis spectroscopy. The absorbance spectra of each sample were measured with a UV-vis spectrophotometer (NanoDrop 2000, Thermo Scientific). Dynamic light scattering (DLS) and zeta potential measurements were also made on each intermediate at 25 °C. Zeta potential measurements were made with a Zetasizer Nano ZS instrument (Malvern Instruments Ltd., Worcestershire, UK), and electrophoretic mobility was measured in a folded capillary cell (DTS 1060, Malvern Instruments). The zeta potential was calculated using the Smoluchowski equation. The size of the particles measured with DLS is reported in a number-based measurement mode. Each sample was prepared and incubated for a few minutes, to form particles, and then transferred to the capillary cell. An equilibration time ranging from and 2–5 minutes was needed to optimize the DLS measurements and collect accurate DLS data. Transmission electron microscopy (TEM) was conducted using a FEI Tecnai 12 microscope in the electron microscope lab at UC Berkeley. The samples were prepared on copper TEM grids (3.05 mm, 400 mesh).
+ Open protocol
+ Expand
2

Characterization of Nanomaterials by TEM

Check if the same lab product or an alternative is used in the 5 most similar protocols
Transmission electron microscopy
(TEM), cryogenic TEM, and electron diffraction measurements were performed
on an FEI Tecnai-12 microscope. High-resolution transmission electron
microscopy and energy dispersive X-ray spectroscopy (EDX) were performed
on an FEI TalosF200X microscope. Samples for TEM imaging were prepared
by drop-casting a toluene solution containing NCs or nanosheets on
a carbon-coated copper grid. Samples for EDX were prepared by drop-casting
on a carbon-coated aluminum grid. The sample for cryogenic TEM was
prepared using an FEI Vitrobot instrument. The electron diffraction
patterns were first radially integrated using the CrystTBox toolbox.35 (link) The pattern obtained was scaled with a scaling
factor determined by fitting a measured gold reference electron diffraction
pattern to a gold reference signal.
+ Open protocol
+ Expand
3

Nano Lipid Droplet Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Purified LDs incubated with ARF/COPI at various conditions were absorbed to continuous carbon-coated grids (glow discharged) at room temperature for 5 min, rinsed briefly with HKM buffer (25 mM HEPES-KOH at pH 7.4, 100 mM KCl, 10 mM MgCl2), and stained with 1% uranyl formate for 20 s. Negatively stained samples were imaged under low-dose conditions in an FEI Tecnai12 microscope (120 kV). Micrographs were collected at 26,000 × magnification using Gatan 4K × 4K CCD camera, giving a pixel size of 4.5 Å. The diameters of nano LDs were manually measured on digital micrographs.
+ Open protocol
+ Expand
4

Ultrastructural Quantification of Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
HeLa cells were fixed with a mixture of 2% PFA and 0.125% glutaraldehyde in 0.1 M phosphate buffer (pH 7.4) for 2 h and processed for ultracryomicrotomy, as described previously (Slot and Geuze, 2007 (link)). Ultrathin cryosections were single- or double-immunogold-labeled with antibodies and protein A coupled to 10 or 15 nm gold (CMC, UMC Utrecht, The Netherlands), as indicated in the legends to the figures. Immunogold-labeled cryosections were observed under a FEI Tecnai 12 microscope equipped with a OneView 4 k Gatan camera. For the quantification of the distribution of ORP5 or seipin immunogold labeling on ultrathin cryosections, gold particles (15 nm) were counted on acquired micrographs of randomly selected cell profiles (the number of cell profiles and the gold particle is indicated in the figure legends). All data are presented as mean (%) ± SEM of three technical replicates.
+ Open protocol
+ Expand
5

Transmission Electron Microscopy of Nanocrystals

Check if the same lab product or an alternative is used in the 5 most similar protocols
TEM images were
acquired using a FEI Tecnai-12 microscope operating at 120 kV. Samples
for TEM imaging were prepared by drop-casting a toluene solution of
purified NCs onto a carbon-coated 200 mesh copper TEM grid.
+ Open protocol
+ Expand
6

Characterization of Gold Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
UV-Vis spectra were acquired with a double beam spectrophotometer (Shimadzu UV-1601) in the 250−800 nm wavelength range. Quartz cuvettes (optical path 1 cm, Optech, München, Germany) were used. Localized surface plasmon resonance (LSPR) peak positions were estimated on at least three replicates for each type of nanocolloid. TEM was performed with a FEI Tecnai 12 microscope (Eindhoven, Netherlands), equipped with a LaB6 filament operating at 120 kV. Size distribution histograms were obtained with OriginPRO 2016 software, after TEM images processing performed by ImageJ software [33 ], manually highlighting individual NPs on each micrograph. Histograms were produced on three replicates, counting more than 800 nanoparticles. X-ray photoelectron spectroscopy measurements were performed on both steel rods and gold colloids deposited on silicon substrates, using a PHI Versaprobe II (Chanhassen, MN, USA) spectrometer equipped with monochromatized Al-Kα radiation (1486.6 eV), following a previously reported procedure [34 (link),35 (link)]. Binding energy (BE) scale was corrected on C1s component at 284.8 eV. Au4f region was fitted using CasaXPS® version 2.3.19PR1.0, selecting a sum function of Gaussian with a Lorentzian (SLG) for the Au(0) component and a product function of a Gaussian with a Lorentzian (GL) for the Au(I) and Au(III) components.
+ Open protocol
+ Expand
7

Cryogenic Transmission Electron Microscopy

Check if the same lab product or an alternative is used in the 5 most similar protocols
C-flat holey carbon transmission electron microscope grids (Protochips, Raleigh, NC) were glow discharged for 20 seconds at 25 mA to create a hydrophilic surface for the 3 μl of blood plasma. A thin film was formed by blotting the grid with filter paper. Vitreous ice was formed by rapid plunging into liquid ethane cooled to − 180°C by liquid nitrogen. Grids were cryogenically observed at − 178°C in an FEI (Hillsboro, OR) Tecnai-12 microscope, which was operated at 80 keV at magnification as indicated in the figure legends. Images were recorded on a Gatan (Warrendale, PA) US 1000 20482 CCD camera.
+ Open protocol
+ Expand
8

Characterization of Thin-Film Materials

Check if the same lab product or an alternative is used in the 5 most similar protocols
The extinction spectra were obtained on the Shimadzu UV–3600 plus ultraviolet/visible/near-infrared spectrophotometer (Shimadzu, Kyoto, Japan). Transmission electron microscopy (TEM) imaging was carried out on an FEI Tecnai 12 microscope operated at 120 kV. The sheet resistance was measured on the four–probe methods (RTS–8) based on the linear four–probe technology. PET was treated by the plasma cleaner (CPC–A). Atomic force microscopy (AFM) images were got by Asylum Research MFP–3D–SA with repulsive force in tapping mode. X-ray diffraction (XRD) image was obtained via a Panalytical Empyrean diffractometer using Cu Kα radiation (λ = 1.5406 Å) in the ranges of 20° to 80°.
+ Open protocol
+ Expand
9

TEM Characterization of Cuboid Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
TEM sample preparation was performed via focused ion beam (FIB) milling with Ga ions using a FIB/SEM Dual Beam Microscope FEI NOVA 200. The lift out and initial milling step was done with 30 kV ions and the final milling step was performed at 5 kV. The resulting lamellae were mounted onto an Omniprobe copper-based lift-out grid and directly transferred to the microscope. STEM observations were carried out by a probe corrected FEI TITAN3 G2 microscope operated at 300 kV in scanning mode. Selected area electron diffraction (SAED) experiments were performed using a FEI Tecnai 12 microscope, operated at 120 kV. TEM samples were prepared from both the surface as well as from the inside of the cuboids after careful cracking.
+ Open protocol
+ Expand
10

Preparation of Cells for TEM Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed in 2.5% glutaraldehyde, washed for 5 min in 0.1 M cacodylate buffer then post-fixed in 1% OsO4 in 0.1 M cacodylate buffer for 30 min. Cells were washed three times with water and stained with 3% uranyl acetate for 20 min. After another rinse with water, cells were dehydrated by sequential 10 min incubations with 70, 80, 90, 96, 100 and 100% ethanol before embedding in Epon at 70°C for 48 h. Thin 70 nm serial sections were cut and stained with 3% uranyl acetate then lead citrate, washing three times with water after each. Once dried, sections were imaged using an FEI Tecnai12 microscope.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!