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Cellsens version 11

Manufactured by Olympus
Sourced in Germany, Japan

CellSens Version 11 is a software suite for acquisition, analysis, and processing of microscope images. It provides a user-friendly interface for controlling compatible Olympus microscopes and cameras, as well as comprehensive tools for image and data management.

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4 protocols using cellsens version 11

1

Dynamics of ParB-GFP fusion protein

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The mutant X. citri parB-gfp::rbsw was cultivated in 5.0 mL of NYG medium for approximately 16 h at 30 °C and 200 rpm. The cultures were adjusted to the OD600nm of 0.1 with fresh NYG medium for a final volume of 5.0 mL and subsequently cultivated in the same conditions for approximately four hours. At this point, theophylline was added to the medium to a final concentration of 2 mM and the culture was kept at 30 °C and 200 rpm to monitor the ParB-GFP dynamics within the cells. Negative controls without the addition of theophylline were also prepared in the same growth conditions as described above. At the points of 4 h (T0 of theophylline exposure), 6 h (2 h of theophylline exposure), 8 h (4 h of theophylline exposure), and 16 h (12 h of theophylline exposure) drops of 5 µL of cell culture were placed on microscope slides prepared for microscope imaging as described by [33 (link)]. Bacteria were visualized using an Olympus BX61 microscope equipped with a monochromatic camera OrcaFlash2.8 (Hamamatsu, Japan) and GFP filter. Data collection and analysis were performed with the software CellSens Version 11 (Olympus, Hamburg, Germany).
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2

Evaluating Chromosome Organization and Viability in X. citri Mutants

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X. citri, Δ4296 mutant, and Δ4296c strains were cultivated in NB media until O.D. 600-nm reached around 0.3 ABS at 29 °C. We performed analysis in different conditions: with ampicillin (20 µg/mL), sucrose 2% (w/v) and glutamic acid 2% (w/v). For morphological analysis, strains were collected by centrifugation, and cells were resuspended in 0.85% NaCl. We used 4′,6-diamidino-2-phenylindole DAPI staining at a final concentration of 0.01% to visualize chromosome organization. Cultures were treated with propidium iodide (IP) for cell viability investigations at a 0.001 mg/mL final concentration. Cells were immobilized in agarose-covered slides for microscope observation [39 (link)]. We performed the assays three times and quantified cells individually (n = 800). Following treatments, cells were immediately visualized using an Olympus BX61 microscope equipped with a monochromatic camera OrcaFlash 2.8 (Hamamatsu, Japan). The software CellSens Version 11 (Olympus, Tokyo, Japan) was used for data collection and analysis.
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3

Bacterial Induction and Microscopic Visualization

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Bacteria were cultivated in 5.0 mL of NB medium for approximately 16 hours at 30°C and 200 rpm. The cultures were adjusted to the OD 600 nm of 0.1 with NB medium for a final volume of 5.0 mL and subsequently cultivated in the same conditions until the OD 600 nm of 0.3. At this point, arabinose was added to the medium to a final concentration of 0.05% and the culture was kept at 30°C and 200 rpm. After a minimum of two hours of induction, drops of 5 μL of cell culture were placed on microscope slides covered with a slide cover slip as described by Martins et al. [23 (link)]. Bacteria were immediately visualized using an Olympus BX61 microscope equipped with a monochromatic OrcaFlash2.8 camera (Hamamatsu, Japan) and TxRed filter. Data collection and analysis were performed with the software CellSens Version 11 (Olympus).
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4

Imaging Xanthomonas citri Cells

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Overnight cultures of X. citri and the mutant strain X. citri amy::pPM2a-zapA were diluted 1:100 into fresh NYG medium and cultivated at 30 °C and 200 rpm until the OD600nm of ~ 0.7. One milliliter of culture was treated with the compounds at MIC50 or 1% DMSO for 6 h at 30 °C. Cells were immobilized on 1% agarose (0.9% NaCl)-covered slides and observed using a fluorescence microscope BX-61 (Olympus) equipped with a monochromatic camera OrcaFlash 2.8 (Hamamatsu). Image documentation and processing were conducted using the software Cell-Sens version 11 (Olympus).
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