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8 protocols using lomustine

1

Preparation of Meclofenamate and Lomustine

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Meclofenamate and lomustine were purchased from Sigma. For preparation of 100-mM stock solutions, Meclofenamate was dissolved in dimethyl sulfoxide (DMSO) and lomustine in ethanol. Both drugs were aliquoted and stored at −20 °C. Final DMSO and ethanol concentrations did not exceed 0.1%.
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2

Cell Viability and Proliferation Assay

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Metabolic activity of cells as a marker of cell viability and proliferation was assessed by WST-1 Cell Proliferation Assay Kit (10,008,883, Cayman Chemical, MICH, USA) according to the manufacture’s recommendation. Three MB cell lines, D341, CHLA-01 and CHLA-01R, were used in this assay. Briefly, cells were seeded at a density of 30,000 cells/well in 96-well plates. Twenty-four hours later, treatment was added as shown in the “Results” section. Assay reaction was assessed 24 or 72 h after treatment. For that, 10 μL of WST-1 reagent was added to each well for 4 h, and absorption was measured using a plate reader (Multiskan Go, Thermo Fisher Scientific, Scoresby, VIC, Australia). Drugs used, including mibefradil dihydrochloride hydrate (M5441), NNC55-0396 hydrate (N0287), verapamil hydrochloride (V4629), nifedipine (N7634), vincristine (V0400000) and lomustine (L5918), were purchased from Sigma-Aldrich.
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3

Preparation of Drug Stock Solutions

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Cisplatin ((SP-4-2)-diamminedichloridoplatinum(II); CIS), lomustine (N-(2-Chloroethyl)-N’-cyclohexyl-N-nitrosourea; CCNU), and temozolomide (4-methyl-5-oxo-2,3,4,6,8-pentazabicyclo[4.3.0]nona-2,7,9-triene-9-carboxamide; TMZ) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Imidazolyl ethanamide pentandioic acid (5-[2-(1H-imidazol-5-yl)ethylamino]-5-oxopentanoic acid; IEPA; for chemical structure see Figure 9) was kindly provided by MyeloTherapeutics (Berlin, Germany). Stock solutions were prepared as follows: 30 mM CIS (molecular weight (MW) 300 g/mol) in 33% dimethyl sulfoxide (DMSO); 100 mM CCNU (MW 249.69 g/mol) in 5% ethanol; 100 mM TMZ (MW 194 g/mol) in 10% DMSO; and 100 mM IEPA (MW 225.25 g/mol) in phosphate-buffered saline (PBS; Lonza, Basel, Switzerland). Aliquots were stored at −20 °C and further working solutions were prepared with assay-specific culture medium (see cell culture and labeling of CD34+ cells) or PBS. Appropriate solvent controls were implemented.
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4

MerTK Tyrosine Kinase Inhibitor Protocol

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Lomustine (CCNU), temozolomide and cisplatin were purchased from Sigma-Aldrich® (Sigma Aldrich Corp., St. Louis, MO). Each was reconstituted in dimethyl sulfoxide and stored at -80°C until use. UNC2025, a MerTK tyrosine kinase inhibitor, was synthesized at the University of North Carolina, Chapel Hill as previously described [15 (link)]. UNC2025 was reconstituted in dimethyl sulfoxide (DMSO), aliquoted and stored at -80°C until use. UNC2369, a tyrosine kinase inhibitor (TKI) with similar structure to UNC2025 that lacks potent MERTK inhibitory activity (IC50 = 490nM in enzymatic assays versus 0.74nM for UNC2025), was used as a negative control compound.
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5

Chemical Screening for Cell Viability

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Dimethylsulfoxide (DMSO), Minimum Essential Medium Eagle (EMEM, M0643), sodium bicarbonate (NaHCO3), noble agar (A5431), resazurin sodium salt (199303), Vincristine (V0400000), Lomustine (L5918), YM-58483 (Y4895), Synta66 (SML1949), GSK1016790A (G0798), HC-067047 (SML0143), AC1903 (SML2244), ML218 (SML0385), Mibefradil dihydrochloride hydrate (M5441), NNC55-0396 hydrate (N0287), Yoda1 (SML1558), Verapamil hydrochloride (V4629) and Nifedipine (N7634) were purchased from Sigma-Aldrich (Ryde, NSW, Australia). IA65 was a kind gift from Professor William Denny and Dr. Ralph Stevenson, and was synthesised as previously described [28 (link)]. CellTiter-Fluor™ Cell Viability (G6081) was obtained from Promega (Madison, WA, USA).
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6

Western Blot Antibody Validation Protocol

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Lomustine, carmustine, oxaliplatin, UCN-01, temozolomide, tamoxifen and GAPDH antibody were purchased from Sigma (USA). Antibody to GRP78 was from Abcam and Santa Cruz Biotechnology (USA). Bcl-2, ERK42/44 and Par-4 antibodies were obtained from BD Bioscience, Santa Cruz Biotechnology (USA), Sigma and Cell Signaling Technology (CST). Phospho Akt (Ser473) and total Akt antibodies were purchased from Santa Cruz Biotechnology (USA). Species specific HRP-labeled and fluorescent labeled secondary antibodies were procured from Bio-rad (USA) and Molecular probes (USA) respectively.
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7

Establishing Toceranib-Resistant Canine Mastocytoma Cells

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Toceranib phosphate was provided by Zoetis (Florham Park, NJ). Masitinib (AB1010, Kinavet®) and LY2457546 were provided by AB Science (Paris, France) and Elanco (Greenfield, IN), respectively. Imatinib was purchased from Selleck Chemical (Houston, TX). Vinblastine (VBL) and lomustine (CCNU) were purchased from Sigma (St. Louis, MO). Stock solutions of all drugs were prepared in DMSO and stored at -20°C. The c-kit mutant canine C2 mastocytoma cell line, derived from a spontaneously occurring cutaneous MCT, was used as the parental cell line [48 (link)]. Cells were propagated in RPMI 1640 supplemented with 2 mM L-glutamine, 10% FBS, 100 g/mL streptomycin, and 100 U/mL penicillin in a 37°C incubator under a humidified atmosphere of 5% CO2. TOC-resistant C2 cells were selected by growing C2 cells in concentrations of TOC ranging from 0.02 uM to 0.3 uM and increasing in 0.025-0.05 uM increments. Three independent, TOC-resistant sublines were established over a period of 7 months.
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8

Evaluating Cell Viability and Proliferation

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Metabolic activity of cells as a marker of cell viability and proliferation was assessed by WST-1 Cell Proliferation Assay Kit (10008883, Cayman Chemical, MICH, USA) according to the manufacture's recommendation. Three MB cell lines, D341, CHLA-01, and CHLA-01R, were used in this assay. Brie y, cells were seeded at a density of 30,000 cells/well in 96 well plates. 24 h later, treatment was added as shown in the results section. Assay reaction was assessed 24 or 72 h after treatment. For that, 10 μL of WST-1 reagent was added to each well for 4 h, absorption was measured using a plate reader (Multiskan Go, Thermo Fisher Scienti c, Scoresby, VIC, Australia). Drugs used, including mibefradil dihydrochloride hydrate (M5441), NNC55-0396 hydrate (N0287), verapamil hydrochloride (V4629), nifedipine (N7634), vincristine (V0400000), and lomustine (L5918), were purchased from Sigma-Aldrich.
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