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Prism 7500 system

Manufactured by Takara Bio
Sourced in Japan, United States

The PRISM 7500 system is a real-time PCR instrument designed for accurate and reliable nucleic acid quantification. It features multiple detection channels and advanced thermal cycling technology to facilitate high-throughput gene expression analysis and detection of various targets.

Automatically generated - may contain errors

2 protocols using prism 7500 system

1

Quantifying Cellular mRNA Expression via RT-qPCR

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Total RNA was extracted from cultured cells using Trizol reagent (Invitrogen, Carlsbad, CA, USA). RNA quantity and purity were determined by absorbance measurements at 260 nm and 260/280 nm, respectively, with a NanoDrop ND-100 spectrophotometer (NanoDrop Technologies, Rockland, DE, USA). A PrimeScriptTM RT Reagent Kit (Takara, Japan) was used for mRNA reverse transcription. Relative mRNA expression was calculated via the 2−ΔΔCT method after normalization to 18S rRNA. qRT- PCR was carried out on an ABI PRISM 7500 system using SYBR® Premix Ex TaqTM II (Takara, Japan). The following PCR primers were used:
CD36 forward: 5′- TGCAAGTCCTGATGTTTCAGA -3′;
reverse: 5′- TGGCTTGACCAATAGGTTGAC -3′.
DEK forward: 5′-AGGCACTGTGTCCTCATTAA-3′;
reverse: 5′- TCTGACAGAATTTCAGGACA-3′.
c-Myc forward: 5′- TCAAGAGGCGAACACACAAC-3′;
reverse: 5′- GGCCTT- TTCATTGTTTTCCA-3′.
18S forward: 5′-CCCGGGGAGGTAGTGACGAAAAAT-3′;
reverse: 5′-CGCCCGCCCGCTCCCAAGAT-3′.
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2

Quantifying Gene Expression in Heart Tissue

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The TRIzol RNA extraction method was carried out for obtaining the total RNA from the heart tissues, as suggested by the instructions provided by the manufacturer. Next, the NanoDrop (Thermo Fisher Scientific Inc., USA) was employed to measure the concentration of the total RNA. The PrimeScript™ RT reagent Kit with a gDNA Eraser (Perfect Real Time) (TaKaRa, Japan) was employed for the synthesis of cDNA. Moreover, the ABI PRISM-7500 system (CA, USA) was used to perform qRT-PCR using the TB Green® Premix Ex Taq™ II (TaKaRa, Japan). The relative expression of the target genes was evaluated by the 2−ΔΔCt method and GAPDH was used as an endogenous control. Table 1 indicates all the sequences of primer.

Sequences of the Used Primers

GenePrimer Sequence
BaxForward: 5′-AAGAAGCTGAGCGAGTGTCT-3′Reverse: 5′-CCAGTTGAAGTTGCCGTCTG-3′
Bcl-2Forward: 5′-CCTGGCATCTTCTCCTTCCA-3′Reverse: 5′-GGACATCTCTGCAAAGTCGC-3′
Caspase-3Forward: 5′-TGTCGATGCAGCTAACCTCA-3′Reverse: 5′-GCAGTAGTCGCCTCTGAAGA-3′
GAPDHForward: 5′-TGTGAACGGATTTGGCCGTA-3′Reverse: 5′-GATGGTGATGGGTTTCCCGT-3′

Note: All primers were designed by TaKaRa, Japan.

Abbreviation: GAPDH, glyceraldehyde-3-phosphate dehydrogenase.

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