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2 protocols using chromogen red

1

Immunohistochemical Analysis of Tissue Sections

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Paraffin sections (10 μm) were dewaxed and stained histochemically with hematoxylin and eosin (HE). For immunohistochemistry, the paraffin sections were dewaxed and subjected to a heat-induced epitope retrieval step except for sections for prior incubation with anti-B220 (clone RA3-6B2, BD Bioscience, 1:400). Primary antibodies against cleaved caspase-3 (Asp175, Cell Signaling, USA, 1:400) and MPO7 (polyclonal rabbit, Dako, code A0398, 1:1000) were used. This was followed by incubation with biotinylated secondary antibodies (Dianova). For detection, alkaline phosphatase-labelled streptavidin and chromogen RED (both Dako) were employed. For detection of macrophages, sections were subjected to protein-induced epitope retrieval employing protease (Sigma) prior to incubation with anti-F4/80 (clone BM8, eBioscience, 1:800). This was followed by incubation with biotinylated rabbit anti-rat (Dako) secondary antibody. Biotin was detected using alkaline phosphatase-labelled streptavidin (Dako). For visualization of alkaline phosphatase, chromogen RED (Dako) was used. Nuclei were counterstained with hematoxylin (Merck). Negative controls were performed by omitting the primary antibody.
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2

Immunohistochemical Analysis of TNBC

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The study was approved by the local ethical review committee (Research ethics committee of the Medical Association Westfalen-Lippe and Westphalian Wilhelms University; ethical vote: 2013-156-f-S). We used tissue microarrays of 362 patients. Of these, 37 were diagnosed as being TNBC by missing expression of ER, PR and HER2. Immunohistochemistry of formalin-fixed, paraffin-embedded tissue microarrays was performed using primary antibody (SFRP1, Epitomics, clone# EPR7003) and biotinylated secondary antibodies (DAKO). Detection was performed using Chromogen Red (DAKO) and H&E (Merck). Slides were embedded with Scientific Cytoseal (Thermo Scientific Fisher).
For immunocytochemistry, cells were fixed with phosphate buffered formalin. Cells were blocked with 10% Aurion (DAKO) in PBS for 1 h. Cells were washed and incubated with primary antibody (β-Catenin, Cell Signaling, # 9587) diluted with Dako REALTM Antibody Diluent (overnight at 4°C). Fluorescent visualization was carried out using suitable Alexa Fluor-conjugated secondary antibody (1:600) together with 4′,6-diamidino-2-phenylindole (1:400) in in Dako REALTM Antibody Diluent) for 1 h at RT.
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