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3 protocols using blocking one blocking buffer

1

Comprehensive Protein Analysis via Western Blot

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Whole cell lysates were prepared with CHAPS buffer [40 mM HEPES (pH7.5), 120 mM NaCl, 1 mM EDTA, 0.3% CHAPS, 50 mM NaF, 1.5 mM Na3VO4, 10 mM glycerophosphate, 10 mM pyrophosphate, 1 mM PMSF] supplemented with protease inhibitor cocktail (Roche Diagnostics, Basel, Switzerland) and phosphatase inhibitor cocktail (Roche Diagnostics). Protein concentration was measured using the BCA assay (Thermo Scientific Pierce). Protein samples were separated by SDS-PAGE and transferred to PVDF membranes (Millipore) using the wet transfer system (Bio-Rad). Membranes were treated with BlockingOne blocking buffer (Nacalai Tesque) for 1 hr and incubated with primary antibody in Can Get Signal (Toyobo) overnight. After 3 washes in TBS-T (Tris buffered saline (pH 7.4) with 0.1% Tween 20), membranes were incubated with secondary antibodies against mouse or rabbit IgG with horseradish peroxidase in Can Get Signal for 1 hr. ECL Prime Western Blotting Detection reagent (Amersham) was used to detect immune complexes. Images were analyzed by Amersham Imager 600 (GE Healthcare Life Science). Primary antibodies recognizing the following proteins were used: Utx, phospho-HSL (Ser563), HSL, ATGL (all from Cell Signaling Technologies); beta-actin (Santa Cruz).
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2

Immunohistochemical Staining Protocol

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Immunostaining was performed with primary antibodies in PBST with 10% Blocking One blocking buffer (Nacalai Tesque) for 2-3 nights at 4°C. After three washes of 10 min in PBS, slices were incubated in secondary antibodies from Jackson Immunoresearch at a concentration of 1:1000 in PBST containing 10% blocking buffer overnight at 4°C. Images were acquired with a Zeiss 710 LSM inverted confocal microscope using 10x, 20x, 60x oil immersion, or 100x oil immersion objectives. For presentation, some images were median filtered with a window radius of one pixel. Additionally, a subset of Z stacks underwent 3D interpolation with a resampling factor of one (3D Viewer, Image J) to permit rotated views of images. See Supplemental Experimental Procedures for additional information.
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3

Western Blot Analysis of Mouse Retinal Proteins

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Mouse eyes were enucleated and their corneas, lenses, choroids, and sclerae were removed. Mouse retinas were homogenized in RIPA lysis buffer (Cosmo Bio) and protein extracts were prepared using NuPAGE LDS Sample Buffer (Thermo Fisher Scientific). Forty micrograms of protein per lane were loaded onto NuPAGE Novex 4–12% Bis-Tris Gels (Thermo Fisher Scientific), separated, and then transferred to an iBlot Transfer Stack, Regular polyvinylidene difluoride membranes (Thermo Fisher Scientific) using the iBlot Gel Transfer Device (Thermo Fisher Scientific). Membranes were blocked with Blocking One blocking buffer (Nacalai Tesque, Kyoto, Japan) at 4°C overnight, and washed five times for 5 min in Tris-buffered saline plus 0.05% Tween 20. Membranes were then incubated with the Ab indicated for each experiment in blocking buffer at 4°C overnight. After washing with Tris-buffered saline plus 0.05% Tween 20, membranes were incubated with goat anti-rabbit IgG H&L (HRP) Ab (1:1,000; Abcam) in blocking buffer at 4°C overnight. Protein bands were detected using a Chemi-Lumi One L assay kit (Nacalai Tesque).
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