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94 protocols using c18 column

1

Quantification of Tricin in ETZL by HPLC

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The content of tricin in the ETZL was determined by HPLC using an Agilent Infinity 1200 series system with a diode array detector (Agilent Technologies, Palo Alto, CA, USA). The separation of tricin was conducted at 30 °C using a SUPELCO Discovery® C18 column (4.6 × 250 mm, 5 μm, Merck KGaA, Darmstadt, Germany). The mobile phase composition was as follows: A, 0.15% phosphoric acid in water; B, methanol. The gradient elution conditions were as follows: 0–3 min, 20% B; 3–8 min, 20–50% B; 8–20 min, 50–55% B; 20–30 min, 55–85% B; 30–45 min, 85–20% B. The flow rate was 1.0 mL/min and the injection volume was 10 μL. The chromatograms were obtained at 350 nm and UV-Vis spectra were acquired in 190–400 nm (Figure 1). The content of tricin was 1.09 ± 0.01 mg/g in the ETZL.
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2

HPLC Analysis of Echinacea Extracts

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EE was solubilized in methanol (Tedia) (1 mg/mL), and 10 μL of this sample was analyzed using LaChrom Elite HPLC system (Hitachi, Tokyo, Japan) liquid chromatograph equipped with L2130 pump, auto-sampler L2200, L2300 column oven was set at 25 °C and an L2455 diode array detector (DAD) (Hitachi, Tokyo, Japan). The C-18 column (5 μm, 150 mm × 4.6 mm) was used in combination with an appropriate guard column (4.0 mm × 4.0 mm; 5 μm of particle size) (Merck, Darmstadt, Germany). The analysis was performed at a wavelength fixed at 354 nm. The eluents used were aqueous phosphoric acid (Merck, Darmstadt, Germany) (1%) (solvent A) and acetonitrile (J. T. Baker, Leicestershire, UK) (solvent B). The gradient employed was 90% A and 10% B for 0 min, 70% A and 30% B for 40 min, 50% A and 50% B for 50 min, 90% A and 10% B for 51 min, and 90% A and 10% B for 55 min at a flow rate of 0.6 mL/min. Data acquisition was performed using ExChrom Elite software (version 3.3.2 SP1) (Scientific Software Inc., Santa Clara, CA, USA). The compounds present in the extract were compared according to their UV–Vis spectra (similarity index > 0.99) and retention times with commercial standards, as previously described [44 ].
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3

HPLC-DAD Detection and Quantification of Plumericin

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Plumericin detection in extracts and in standard samples was performed using an HPLC-DAD device (ELITE LaChrom). A gradient system developed in the lab was applied: solvent A (0.05% Trifluoroacetic acid (TFA) in water milli-Q, and solvent B (acetonitrile) for 30 min on a C18 column (Merck©, France; column temperature 27 °C) at a flow rate of 1.0 mL/min. The Elution profile: 0 to 7 min, 40 to 45% B (linear gradient); 7 to 12 min, 45% B (isocratic); 12 to 13 min, 45 to 50% B (linear gradient); 13 to 15 min, 50 to 70% B (linear gradient); 15 to 17 min, 70 to 100% B (linear gradient); 17 to 28 min (column washing), 100% B (linear gradient). Plumericin detection and quantification were established at 230 nm wavelength.
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4

HPLC Analysis of Epicatechin and Catechin

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Chemical analysis of epicatechin and catechin was conducted by HPLC analysis and a minor modification of a previously published method (Kim et al., 2014 (link)). Briefly, dried samples of F. dibotrys rhizomes were ground into a fine powder using a grinder. Powdered samples (~150 mg) were subjected to extraction via ultra-sonication with 80% (v/v) methanol at room temperature for 60 min. Subsequently, the extracts were centrifuged, and the supernatant was filtered through a 0.45-μm micromembrane for HPLC analysis. A Merck C18 column (250 mm × 4.6 mm × 5 μm) was used as the stationary phase, and a solution of ultrapure water (pH was adjusted to 3.00 ± 0.02 with phosphoric acid) and acetonitrile (90:10) was the mobile phase, and the flow rate was maintained at 1.0 mL·min−1 at 35°C. An injection volume of 20 μL and a wavelength of 280 nm were used for detection. The compounds in the sample were determined using a standard curve. All samples were analyzed in triplicate.
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5

HPLC-DAD Analysis of Phytochemicals

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HPLC-DAD analysis was conducted using the chromatograph LaChrom Elite (Hitachi, Tokyo, Japan) equipped with an L2455 DAD detector adjusted in the range of 230 to 400 nm, L2200 injector, L2130 pump, L2300 column oven, and a C18 column (150 × 4.6 mm, 5 µm, Merck, Darmstadt, Germany). Data were obtained with EZChrom Elite software, version 3.3.2 SP1 (Santa Clara, CA, USA). Analysis conditions were according to [20 (link)]. The mobile phase consisted of a gradient of 1% phosphoric acid and acetonitrile (Table 1) with a flow rate of 0.5 mL per minute.
Samples were obtained by diluting the extract with methanol to the concentration of 4 mg/mL followed by filtration with a 0.45 μm filter (Millex, Merck KGaA, Darmstadt, Germany). Commercial standards were used in an attempt to identify the compounds present in HEMNL by comparison of retention times and ultraviolet spectra. The standards were caffeic acid, chlorogenic acid, ferulic acid, kaempferol, gallic acid, rosmarinic acid, ellagic acid, isoquercitrin, hesperetin, quercetin, resveratrol, vitexin, isovitexin, coumarin, and myricetin acquired from Sigma-Aldrich®, hyperoside acquired from Hwi Analytik Gmbh® (Rülzheim, Germany), and rutin from Chromadex® (Los Angeles, CA, USA).
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6

Kinetic Analysis of Prokaryotic Translation

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Two mixtures were prepared. The ribosome mixture contained 70S ribosomes (0.5 µM), IF1, IF2 and IF3 (1 µM each), f[3H]Met-tRNAfMet (1 µM), mRNA (2 µM), GTP (1 mM) and ATP (1 mM). The TC mixture contained EF-Tu (1–10 µM), EF-Ts (1 µM), phenylalanine (200 µM), PheRS (0.5 µM), tRNAPhe (12 µM), viomycin (0–2000 µM), GTP (1 mM) and ATP (1 mM). After 15 min incubation at 37°C, equal volumes of the two mixes were rapidly mixed and the reaction quenched at different time points with formic acid (17% final concentration) using a quench-flow instrument (RQF-3 KinTek corp.). After quenching, the samples were centrifuged at 20,800 g and the supernatant discarded. The pellet was dissolved in 165 µl 0.5 M KOH to cleave the peptides from the tRNA. After 10 min 13 µl of 100% formic acid was added, the samples were centrifuged at 20,800 g and the radioactive peptides in the supernatant were analyzed by RP-HPLC using a H2O/MeOH/trifluoroacetic acid (58/42/0.1 by volume) mobile phase and a C-18 column (Merck) with on-line scintillation counting (β-RAM model 4 IN/US systems) to quantify the relative amounts of f[3H]Met and f[3H]Met-Phe.
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7

HPLC Analysis of Free Amino Acids in Andrographis Leaf Extract

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The free amino acids present in the A. paniculata (Harapan) water extract were analyzed by an HPLC gradient system with a Merck C18 column. Buffer A (0.1 M ammonium acetate, pH 6.5) and buffer B (0.1 M ammonium acetate containing acetonitrile and methanol, 44:46:10, v/v, pH 6.5) were used.
For sample preparation, approximately 0.28 ± 0.10 g (14.29 mg protein) of A. paniculata (Harapan) leaf water extract was used and amino acid analysis was done as described by Hainida et al. [60 (link)].
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8

Validated HPLC Method for Naftifine Analysis

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For the HPLC (Shimadzu Model LC 20AT; Shimadzu Corporation, Kyoto, Japan) analysis of naftifine, we used a reversed phase C18 column (4.6×150 mm, 5 μm; EMD Millipore, Billerica, MA, USA) preceded by a guard column (4×4 mm, 5 μm, Merck). The mobile phase consisted of acetonitrile:tetrahydrofuran:tetramethyl-ammonium hydroxide buffer (pH 7.8) (62:10:28), and the flow rate was fixed at 1.2 mL·min−1. The wavelength of detection was set at 280 nm. The limit of quantification was found to be 0.025 mL·min−1. The method was validated for selectivity, linearity, accuracy, and precision. It was found to be linear between the concentration range of 0.025 μg/mL and 100 μg/mL with a high correlation coefficient (r2>0.999) and was precise (intra- and interday variation <2%) and accurate (mean recovery >99%). Comparison of the chromatograms of samples from the extracted pig and human skin and blank tapes did not reveal any interfering peaks with naftifine confirming the selectivity of the method.
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9

Amino Acid Analysis of Fresh CCF

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A reversed phase high performance liquid chromatographic method was adopted to analyze amino-acid content of fresh CCF. The sample was derivatized for volatility suitable for amino-acid analyzing using FMOC-Cl (9- fluorenylmethylchloroformate) as derivatization reagent and analyzed using Agilent 1260 Infinity HPLC System (Agilent Technologies, Santa Clara, California, USA) (Fabiani et al., 2002 (link); Thakur and Sayeed, 2014 ). Detection was carried out using a Diode Array Detector (DAD, λmax = 263nm). The sample was injected onto a C-18 column (4.6mm × 250 mmi.d., 5μm) equipped with a guard column of the same material (Merck). The column operated at a flow rate of 1 ml/min using acetonitrile and water (90:10) as eluent A and sodium acetate (50mM) as eluent B.
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10

Quantification of Plant Hormones by HPLC

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The samples extracted from germinating seeds subjected to moisture stress and control were quantified by using HPLC (Spectra UV1000, Thermo Fisher, Waltham, MA, USA). The standard stock solutions (HiMedia) were prepared by using methanol (500 μg mL−1). The standards and samples (20 μL) were injected through a rheodyne injection valve to the C18 column (Merck), and the compounds separated were detected by using a PDA detector. The endogenous IAA, GA, ABA and Cytokinin (CK) contents were determined by comparing the retention time and peak area of the sample with the standards and expressed as μg g−1. Exactly 5 μL of sample was injected into HPLC and eluted out by using a gradient of 60 percent acetonitrile (HPLC grade) for 20 min, at the flow rate of 1 mL.min−1, and the compounds were detected at 265 nm [40 (link)].
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