The largest database of trusted experimental protocols

Vivoquant 3

Manufactured by Invicro
Sourced in United States

VivoQuant 3.5 is a comprehensive software platform that provides advanced image analysis and quantification tools for preclinical imaging data. It offers a range of features for the visualization, processing, and analysis of multimodal imaging data, including PET, SPECT, CT, and MRI.

Automatically generated - may contain errors

7 protocols using vivoquant 3

1

Biodistribution of 76Br-bedaquiline in TB

Check if the same lab product or an alternative is used in the 5 most similar protocols
After an incubation period of 10 weeks post-infection, M. tuberculosis-infected animals
were injected with 1.30 ± 0.12 MBq of 76Br-bedaquiline via tail vein and imaged within a sealed bio-containment
bed (Minerve), as described previously.15 (link) Computed tomography (CT) and PET were
performed using the nanoScan PET/CT (Mediso) with 30 min acquisition frames at 30 min, 1, 4, 5, 24 and 48 hours post injection of
the tracer. Scatter and attenuation correction was applied to the images and were analyzed using VivoQuant 3.0 (Invicro) for
visualization. Quantification of the biodistribution of the radiolabeled drug was performed by drawing ROI, based on the CT, for
quantification using AMIDE 1.0.4. For each lesion, the ROIs were drawn in the same region for each time-point to quantify the same
lesion over 48 hours. Data for blood activities were obtained by placing an ROI in the left ventricle of the heart and converted
to plasma using the hematocrit.31 (link) The PET data were adjusted for mass using the
density of each ROI (obtained from the CT as Hounsfield units) and are expressed as % injected dose (ID) / weight (g).
+ Open protocol
+ Expand
2

In Vivo PET Imaging of M. tuberculosis Infection

Check if the same lab product or an alternative is used in the 5 most similar protocols
After an incubation period of 10 weeks postinfection with M. tuberculosis, anesthetized animals (n = 4) were injected with 3.52 ± 1.27 MBq of 18F-linezolid via tail vein and imaged within a sealed biocontainment bed (Minerve), as described previously.16 The injection time coincided with the start of PET acquisition to obtain dynamic tracer uptake information over 60 min. PET scans were followed by computed tomography (CT) scans and performed using the nanoScan PET/CT (Mediso). The images were analyzed using VivoQuant 3.0 (Invicro) for visualization and quantification of the biodistribution of the radiolabeled drug by drawing regions of interest (ROI) on the basis of the CT. Data for blood activities were obtained by placing an ROI in the left ventricle of the heart and then converted to plasma using the hematocrit values.28 (link) PET data was adjusted for mass using the density of each ROI (obtained from the CT as Hounsfield units) and is expressed as % injected dose (ID)/mass of tissue (g).
+ Open protocol
+ Expand
3

Preclinical PET Imaging of Tumor Metabolism

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice were fasted for 4-8 hours prior to induction of anesthesia with 1 – 2.5% isoflurane. 2-deoxy-2-[18F]fluorodeoxyglucose (12.1±1.1 MBq) (Alliance Medical, Guildford, UK) was injected intravenously via a tail vein. Data were acquired between 90- and 110-min post-injection in list-mode format on a NanoPET/CT scanner (Mediso, Hungary). Static PET images with a nominal isotropic resolution of 0.4 mm were reconstructed using a three-dimensional ordered-subset expectation maximization method with one to three coincidence modes, four iterations and six subsets. Images were normalized and corrected for decay, dead-time, random events and attenuation. For anatomical reference and attenuation correction a whole-body helical CT was acquired. The images were analyzed using Vivoquant 3.0 software (InviCRO, Massachusetts, USA). A region of interest was drawn manually over the subcutaneous tumor and Otsu thresholding applied to delineate the tumor.
+ Open protocol
+ Expand
4

Assessing BBB Permeability via SPECT/CT Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
For mice included in the studies described in Section 2.1 and Section 2.2, the BBB opening was evaluated by SPECT/CT imaging using [99mTc]Tc-DTPA as radiotracer 0.5 h, 3 h and 24 h post BBB permeabilization. For animals of the study described in Section 2.2, this procedure was also performed 24 h before BBB permeabilization.
[99mTc]Tc-DTPA was administered via an intravenous injection of 50 μL of radioactive tracer (20 MBq) in isotonic and pyrogen-free solution using an insulin syringe (27G). Thirty minutes after injection, the SPECT/CT acquisition was done for 20 min under anesthesia with 1.5% vol% isoflurane (IsoVet®, Laboratoire Osalia, Paris, France) using a NanoSPECT/CTplus® camera and the Nucline® 1.02 acquisition software (Mediso Medical Imaging System Ltd., Budapest, Hungary). SPECT and CT DICOM files were fused for reconstruction and image processing was carried out with VivoQuant® 3.5 and InvivoScope® 2.00 reconstruction software (InviCRO, Boston, MA, USA) to assess tracer uptake in the brain.
For the pilot study, statistical analysis was performed using two-way ANOVA (uncorrected Fisher’s LSD test). For the hemispheric BBB permeabilization study, statistical analysis was performed using two-way ANOVA with Dunnett’s multiple comparisons test of each time point vs. the basal value (−24 h).
+ Open protocol
+ Expand
5

Quantifying Brain Infection PET Signals

Check if the same lab product or an alternative is used in the 5 most similar protocols
Images were reconstructed and coregistered using VivoQuant 3.5 (InviCRO). 3D spherical VOIs were drawn to measure 11C-rifampin PET signal in whole blood (carotid in rabbits; left ventricle in humans), BLs [visualized on MRI (human) or CT and/or with 18F-FDG PET (rabbits)], and contralateral UB regions in the infected brain (human and rabbits) and presented as mean Bq/ml. Multiple VOIs were drawn if multiple lesions were visualized in the same subject. Whole-blood VOIs were corrected to plasma using the average hematocrit (50%) in young rabbits (42 ) and the patient’s measured hematocrit (37.9%). The brain VOIs were corrected for cerebral blood volume (3%) (43 ).
+ Open protocol
+ Expand
6

Quantifying PET Uptake in Orthopedic Implant Infection

Check if the same lab product or an alternative is used in the 5 most similar protocols
On post-operative days 7, 21 and 56, rabbits were placed under anesthesia, weighed and 14.04±1.7 MBq 18F-FDG was injected intravenously via the ear vein. Static images were acquired 45 min following tracer injection. PET images were obtained using a single static 15-min acquisition followed by CT imaging for attenuation correction and anatomical co-registration using the nanoScan PET/CT (Mediso Systems, USA), modified from previously described methods (Davis et al., 2009 (link)). PET-CT images were reconstructed and co-registered using VivoQuant 3.5 (InviCRO). 3D spherical volumes of interest were drawn to measure 11F-FDG-PET signal surrounding infected hardware and in an uninfected reference point (anteriorly to L4). SUVs were derived. Uptake into bone and soft tissue was determined based on an ROI surrounding the hardware and using CT-derived thresholds for bone [>700 Hounsfield units (HU)]. The implant was excluded from the images prior to analysis. SUVs were derived and ratios between bone and soft tissue calculated.
+ Open protocol
+ Expand
7

In Vivo Near-Infrared Autofluorescence Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
The in vivo measurement of the near-infrared autofluorescence (NIRAF) was performed using a FLECT/CT (Trifoil InSyTe, Chatsworth, CA, USA), seven weeks after the TS surgery, as described previously [9 ]. Briefly, the mice were anesthetized and the fur removed as required, and the animals then placed in the imaging chamber, where they remained anesthetized throughout the imaging procedure (~70 min). The X-ray CT scans were performed using the following settings: 30 kV for tube voltage, 500 µA for tube current, and 150 ms exposure time. The fluorescence scans were performed using a 730 nm excitation laser and 803 nm filter in step-and-shoot scanning mode, with 29 source angles per slice and 500 ms exposures, and subsequent fluorescence attenuation scans were performed in continuous mode. A reconstructed 3D image of the x-ray scan detailing the anatomy of the mouse was overplayed onto the corresponding fluorescence-reconstructed image by VivoQuant 3.5 (InviCRO, Needham, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!