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3 protocols using pcase12 mito

1

Monitoring Intracellular Ca2+ Dynamics in N2a-IP3R3 Cells

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siRNA against Sig1R was obtained from Life Technologies. A mitochondrial Case12‐expressing plasmid (pCase12‐mito) was purchased from Evrogen (Moscow, Russia). N2a‐IP3R3 cells were seeded at 2.0 × 105 cells/dish on poly‐D‐lysine‐coated glass‐bottom dishes (MatTek, Ashford, MA). After transfection with Lipofectamine 2000 and/or Lipofectamine RNAi MAX (Life Technologies), the cells were incubated for 24 h in the differentiation media. Fluo‐4 AM (Life Technologies), PRE‐084, or NE‐100 (both from Sigma‐Aldrich, 5 μM each) was added 1 h prior to observation. The cells were washed twice with warmed Hank's balanced saline (Life Technologies). Fluorescence intensity was measured every 3 s until 120 s, and intracellular Ca2+ release was stimulated by adding adenosine triphosphate (ATP; 10 μM) to the media at 30 s.
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2

Optimized siRNA and Plasmid Transfection Protocol

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For siRNA experiments, A2/29 cells (0.3 × 105/ml) were plated onto 12-well plates. After 24 h, cells were transfected with ON-TARGETplus mouse siRNAs (100 nM; Dharmacon): scrambled (D-001810–10-10–05), Tspo (L-040291–02-0005), or Atg5 (L-064838–00-0010), each composed of 4 different siRNAs to avoid off-target effects. The siRNAs were transfected using Lipofectamine 2000 (Invitrogen, 11,668–019) according to the manufacturer’s instructions. After 4 h, the medium was changed and the cells were incubated with fresh medium for 44 h.
For plasmids transfection, A2/29 cells seeded on coverslips were transfected with 1.5 µg of plasmid using TurboFect Transfection Reagent (Thermo Fisher Scientific, R0534) according to the manufacturer’s protocol. The following plasmids were used: pmRFP-GFP-MAP1LC3B (a gift from Dr. Inhee Mook-Jung, Seoul National University), pmRFP-MAP1LC3B (Addgene, 21,075; Tamotsu Yoshimori’s lab), pEGFP-PRKN generated by subcloning of Myc-PRKN from pRK5-Myc-PRKN (Addgene, 17,612; Ted Dawson’s lab) into pEGFP-C1 (Clontech, 6084–1), pCase12-mito (Evrogen, FP995), and pDsRed2-mito (Clontech, 55,858).
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3

Histamine-Induced Mitochondrial Response in DU145 Cells

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DU145 cells expressing mock or COMP were transiently transfected with 5 μg pCase12-mito (Evrogen) using Lipofectamine 3000 (Invitrogen). After 24 hours, the cells were detached and washed in warm PBS supplemented with 10% HI-FBS. After 5 min stimulation with 0 or 100 μM histamine (Sigma-Aldrich), the cells were immediately analysed by flow cytometry.
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