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Varian 725 es

Manufactured by Agilent Technologies
Sourced in United States, Australia

The Varian 725-ES is an atomic absorption spectrometer designed for routine analysis of metal concentrations in various sample types. It provides accurate and precise measurements of trace elements in a wide range of matrices.

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9 protocols using varian 725 es

1

Quantifying Cd and Mineral Content in Poplar

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The content of Cd and selected minerals (K, Ca, Mg, Zn) in the roots and shoots of grey poplar samples was determined using ICP-OES (Inductively Coupled Plasma Optical Emission Spectrometry, Varian 725-ES, Agilent Technologies, Santa Clara, USA). Dried material was milled to fine powder, whereas each sample (100 mg fresh weight) was mineralized with 5 mL of nitric acid [67% HNO3 (w/v)] and 1 mL of hydrogen peroxide [30% H2O2 (w/v)] in a microwave digestion system (Speedwave4, Berghof Products Instruments, Eningen, Germany) at 200 °C for 15 min. Cooled samples were diluted with distilled water, and the element content was determined by ICP-OES (Varian 725-ES, Agilent Technologies, Santa Clara, USA). Three biological replicates of control and Cd-treated plants were analysed in two individual sets of experiments.
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2

Soil and Foliar Nutrient Analysis

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The soil samples were sieved (<2 mm) to remove stones and root biomass. For each sample for the chemical analysis, we determined the average of two measurements of soil potential acidity using a NH4Cl extraction solution and a glass electrode; soil nitrogen (wt%) using a C/N-analyzer (TruSpec CN, LECO Corporation, St Joseph, MI, USA); soil phosphorus (mg kg−1) using the lactate extractable phosphate method; and concentrations of exchangeable bases Ca, K, Mg, and Na (cmol kg−1) by extraction with 1M NH4Cl. Soil organic matter content (SOM; wt%) was determined for a subsample of the soil collected for the respiration experiment by using the loss on ignition method in a muffle furnace (Hoogsteen et al., 2015 (link)).
Oven-dried leaf samples were milled prior to chemical analysis. Foliar carbon (C) (g kg−1) and nitrogen (N) (g kg−1) contents were determined using the Dumas method in a vario MACRO device (Elementar Analysensysteme, Hanau, Germany). Foliar phosphorus (P) (g kg−1) content was determined using an inductively coupled plasma-optical emission spectrometer (ICP-OES) (Varian 725ES, Varian Inc., Palo Alto, CA, USA).
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3

Intracellular Potassium Quantification

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Intracellular K+ concentrations were quantified by optical emission spectrometry (Katsnelson et al., 2015 (link)). Cells were washed with the K+-free buffer: 135 mM sodium gluconate, 1.5 mM CaCl2, 1 mM MgCl2, 25 mM Hepes, pH, 7.4. Cells were treated with 2 ml 10% nitric acid for 2 h, and extracted total K+ content was quantified using an inductively coupled plasma/optical emission spectrometer (ICP/OES) Varian 725-ES (VARIAN Medical Systems, Inc.).
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4

Characterizing Freshwater Nutrient Levels

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Water samples were filtered (GF 6, Whatman, GE Healthcare, Buckinghamshire, UK, pore size < 1 µm) on the day of collection and then frozen (−18°C). Potassium (K, 0.1 mg/L), calcium (Ca, 0.1 mg/L), magnesium (Mg, 0.02 mg/L), phosphorous (P, 0.1 mg/L), sulfur (S, 0.3 mg/L), sodium (Na, 0.1 mg/L), silicon (Si, 0.005 mg/L), iron (Fe, 0.01 mg/L), and manganese (Mn, 0.003 mg/L) concentrations were measured using an inductively coupled plasma optical emission spectrometer (ICP‐OES, Varian 725‐ES, Agilent Technologies Australia Pty Ltd, Mulgrave, Victoria, Australia). Values in brackets give the detection limit of a given element. Nutrient concentrations below the detection limit were arbitrarily set to half of that limit for further calculations. Phosphorous (P) concentrations were below the detection limit in most ecosystem components, and are not presented. Nutrient concentrations were not measured in samples taken on 21 July, 2 August, 26 August, and 9 September 2015.
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5

Rubidium Flux Assay for Ion Channel Activity

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In this work, in order to estimate the required parameters for the quantitative model, the ion fluxes through the channels and pumps were determined using a flux-based assay with a tracer element. Here, Rb+ was used as a tracer of potassium to study the flux through the potassium channels and Na+/K+ ATPase pumps23 (link),24 (link),47 (link). In the Rb+ assay, cells were incubated with a buffer containing Rb+ for 0.5-2 hours. At specific time intervals, cells were washed to remove extracellular Rb+ and channel activity was determined by measuring the rubidium concentration of the cell lysate and supernatant using an ion specific tool, inductively coupled plasma optical emission spectroscopy (ICP-OES, Varian 725-ES, (Agilent, Australia)).
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6

Mineral Content Analysis of Periwinkle Shells

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The mineral content of empty shells (see above) (for Ca2+, Mg2+, Sr2+, K+) of adult individuals of L. littorea exposed for 14 days to different PCO2 conditions was determined using an optical emission spectrometry technique. Shell fragments were meticulously cleaned of all tissue under low-power magnification (10–50, SZXI6 binocular microscope, Olympus, Tokyo) using only plastic or Teflon-coated dissection tools. Shell fragments were then weighed with a high-precision balance (AT201, Mettler-Toledo; degree of precision (dp) 0.01 mg) before being freeze-dried for 24 h (Modulyo freeze drier, Thermo Electron, Waltham, MA, USA) at −50 °C. The dry mass of each freeze-dried set of shell fragments was determined with a high-precision balance (AT201, Mettler-Toledo; dp 0.01 mg) before being digested in 2 ml nitric acid (79% concentration, trace analysis grade) in a microwave digestion unit (MarsXpress, CEM, Matthews, NC, USA). Digests were then diluted to 10 ml with ultrapure water and analysed for [Ca2+], [Mg2+] and [Sr2+] with an ICP-Optical Emission Spectrometer (Varian 725-ES, Agilent Technologies, Santa Clara, CA). Shell mineral content is expressed as mmol kg−1. Shell mineral content was determined for the populations of Île de Ré, Roscoff, Millport, Trondheim and Tromsø.
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7

Macro- and Micronutrient Analysis Protocol

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To determine macro- and micronutrient content, samples were dried at 70 °C in a drying oven for 72 h and pulverized in a blender (Oster 6832, Milwaukee, WI, USA). Samples were subjected to wet digestion in a mixture of perchloric and nitric acids at a 2:1 (v/v) ratio, according to the protocol described by Alcántar and Sandoval [37 ]. To determine the concentrations of macronutrients (P, K, Ca, Mg, and S) and micronutrients (B, Cu, Fe, Mn, Ni, and Zn), the extracts were analyzed using a coupled plasma induction optical emission spectrometer (ICP-OES, Varian 725-ES, Agilent; Mulgrave, VIC, Australia). The N concentration was determined by the semi-microkjeldahl method according to the protocol described by Bremner [38 ].
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8

Determination of Cd and Mineral Content in Poplar

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The content of Cd and selected minerals (K, Ca, Mg, Zn) in the roots and shoots of grey poplar samples was determined using ICP-OES (Inductively Coupled Plasma Optical Emission Spectrometry). Dried material was milled to fine powder, whereas each sample (100 mg fresh weight) was mineralized with 5 ml of nitric acid [67% HNO 3 (w/v)] and 1 ml of hydrogen peroxide [30% H 2 O 2 (w/v)] in a microwave digestion system (Speedwave4, Berghof, Germany) at 200°C for 15 min. Cooled samples were diluted with distilled water, and the element content was determined by ICP-OES (Varian 725-ES, Agilent Technologies, USA). Three biological replicates of control and Cd-treated plants were analysed in two individual sets of experiments.
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9

Crustacean Carapace Mineral Analysis

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Carapace mineral content was determined in larvae at each intermolt stage in one individual per cone (N p 9 per treatment). Each carapace was carefully removed with fine forceps and meticulously cleaned of all tissue under low-power magnification (#10-50, SZXI6 binocular microscope, Olympus, Tokyo). Each individual carapace was then weighed with a high-precision balance (AT201, Mettler-Toledo; d p 0.01 mg) before being freezedried for 24 h (Modulyo freeze drier, Thermo Electron, Waltham, MA) at 2507C. The dry mass of each freeze-dried carapace was determined with a high-precision balance (AT201, Mettler-Toledo; d p 0.01 mg) before being digested in 2 mL nitric acid (79% concentration, trace analysis grade) in a microwave digestion unit (MarsXpress, CEM, Matthews, NC). Digests were then diluted to 10 mL with ultrapure water and analyzed for [Ca 21 ], [Mg 21 ], and [Sr 21 ] with an ICP-Optical Emission Spectrometer (Varian 725-ES, Agilent Technologies, Santa Clara, CA). Carapace mineral content is expressed as mmol mg 21 (carapace dry mass).
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