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Cl 4b

Manufactured by Merck Group
Sourced in Germany, United States

CL-4B is a gel filtration chromatography medium used for the separation and purification of proteins, peptides, and other biomolecules. It is composed of cross-linked agarose beads with a fractionation range suitable for the separation of molecules with a molecular weight range of 1,000 to 300,000 daltons.

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5 protocols using cl 4b

1

Acanthamoeba Adhesion to Functionalized Beads

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D-mannose agarose beads (Sigma-Aldrich Chemie GmbH, Munich, Germany) and sepharose beads (CL-4B, ø 40 μm to 165 μm, Sigma-Aldrich Chemie GmbH, Munich, Germany) were each diluted in a ratio of 1:10 in PBS and subsequently centrifuged at 1000 rpm for 5 min. The supernatant was removed and the washing procedure was repeated twice. Finally, the cleaned beads were diluted 1:10 in PBS. 3 × 105A. castellanii or A. comandoni in 5 ml of PYG medium were seeded into tissue culture bottles (25 ml, Sarstedt AG & Co., Nümbrecht, Germany) and 0.5 ml of one of the bead solutions were added. The samples were observed with an inverted phase contrast microscope (Olympus CKX41) equipped with a camera (C9300, Hamamatsu, Hamamatsu, Japan) and 50 images of each bottle were taken right after the addition, after 2 h and after 4 h incubation time at room temperature. The number of acanthamoebae adhering to the beads and the total number of acanthamoebae in the resulting images were counted.
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2

Lipid-Based Nanoparticle Delivery of siRNA

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d-Galactosyl ceramide, PEG-DSPE (1,2-distearoyl-sn-glycero-3-phosphoethanolamine (ammonium salt)), cholesterol, POPC (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine), rhodamine-conjugated DOPE (1,2-dioleoyl-sn-glycero-3-phosphoethanolamine), and DOTAP (dioleoyl-3-trimethylammonium-propane) were purchase from Avanti Polar Lipid, Inc. (Alabaster, AL, USA). The cationic lipid DMKE (O,O’-dimyristyl-N-lysyl glutamate) was synthesized as previously reported [32 (link)]. EX-CyTox that is cell viability and cytotoxicity test reagent is Daeil Lab Service Co., Ltd (Seoul, South Korea). Doxorubicin and CL-4B (agarose beads) were purchased from Sigma-Aldrich Chemical (St. Louis, MO, USA). FITC-labeled siRNA was purchased from Invitrogen Life Technologies (Grand Island, NY, USA). siRNA against vimentin was obtained from Santa Cruz biotechnology (Dallas, TX, USA).
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3

Coimmunoprecipitation of Vpu and CD47

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For coimmunoprecipitation studies of Vpu and CD47, transfected HEK 293T cells were lysed in 3-[(3-cholamidopropyl)-dimethylammonio]-1-propanesulfonate (CHAPS) buffer (50 mM Tris, 5 mM EDTA, 100 mM NaCl, 0.5% CHAPS, pH 7.2) supplemented with protease inhibitors. Lysates were first precleared by incubation with 40 μl of protein A-Sepharose beads CL-4B (Sigma, GE17-0963-03) for 1 h at 4°C and incubated with mouse MAb anti-HA (clone 16B12) overnight. The following day, 40 μl of beads was added, and samples were incubated for 2 h, washed five times with CHAPS buffer, and analyzed by Western blotting.
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4

Co-Immunoprecipitation Protocol for Protein Analysis

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For co-immunoprecipitation, the cells were lysed in 1 mL 1% NP-40 lysis buffer(1% NP-40, 50 mM Tris-base, 150 mM NaCl). Cell lysates were gently shaken with 100 µL CL-4B (Sigma-Aldrich, St Louis, MO) at 4°C for 1 hr, then centrifuged at 15000 r/min 4°C for 15 min. The immunoprecipitation antibody recruited with 20 µL protein A/G (Santa Cruz Biotechnology, Santa Cruz, CA) were mixed with the supernatant and shaken at 4°C overnight. The protein-agarose beads mixture was washed once by 1% NP-40 lysis buffer and twice by ice-cold PBS, boiled with 4×SDS sample buffer, then analyzed on 10% glycine SDS-PAGE gel.
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5

Co-immunoprecipitation of Vpu and CD47

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For co-immunoprecipitation studies of Vpu and CD47, transfected HEK 293T cells were lysed in CHAPS buffer (50 mM Tris, 5 mM EDTA, 100 mM NaCl, 0.5% CHAPS, pH7.
supplemented with protease inhibitors. Lysates were first precleared by incubation with 40 µL of protein A-sepharose beads CL-4B (Sigma, #GE17-0963-03) for 1 h at 4°C and then incubated with mouse mAb anti-HA (clone 16B12) overnight. The following day, 40 µL of beads were added and samples were incubated for 2 h, washed five times with CHAPS buffer and analyzed by Western blotting.
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