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2 protocols using quantifast sybr green polymerase chain reaction kit

1

Quantitative Analysis of TLR4 Signaling

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The following reagents were obtained: human embryonic kidney (HEK)-Blue-mTLR4 cells (Invivogen, San Diego, CA), Quanti-Blue medium (Invivogen), Escherichia coli LPS (Sigma, St. Louis, MO), Histogene laser capture microdissection (LCM) staining kit and Picopure RNA isolation kit (Arcturus; Life Technologies Corporation, Carlsbad, CA), Sensiscript RT kit, QIAamp DNA Stool Mini Kit, and QuantiFast SYBR Green Polymerase Chain Reaction (PCR) Kit (Qiagen, Valencia, CA), and stress-activated protein kinase/c-Jun N-terminal kinase (JNK) inhibitor (SP600125; Sigma Aldrich, St. Louis, MO). All other reagents were obtained from Sigma.
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2

Quantitative RT-PCR analysis of CYP genes

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Total RNA was extracted using an RNeasy Mini kit (Qiagen, Hilden, Germany) and DNA was on-column digested using RNase-free DNase Set (Qiagen) during total RNA extraction. cDNA was synthesized from total RNA using a QuantiTect Reverse Transcription kit (Qiagen). The synthesized cDNA was amplified using a QuantiFast SYBR Green polymerase chain reaction (PCR) kit (QIAGEN). Primer sequences were as follows: CYP1A1-F, 5′-CACCATCCCCCACAGCAC-3′; CYP1A1-R, 5′-ACAAAGACACAACGCCCCTT-3′; CYP1B1-F, 5′- CTGGCACTGACGACGCCAAGAGACT -3′; CYP1B1-R, 5′-TGGTCTGCTGGATGGACAGCGGGTT-3′; CYP1A2-F, 5′-CCAACGTCATTGGTGCCATG-3′; CYP1A2-R, 5′-GTGATGTCCCGGACACTGTTC-3′; β2-microglobulin (β2M)-F, 5′-ACTGAATTCACCCCCACTGA-3′; β2M-R, 5′-CCTCCATGATGCTGCTTACA-3′. PCR was performed using a Thermal Cycler Dice Real Time System TP800 (Takara). The mRNA levels were normalized against β2M mRNA.
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