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23 protocols using xf24 well microplate

1

Metabolic Activity Profiling of NRVMs and H9c2

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To determine cellular oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) of the primary culture of NRVMs and H9c2, we used the XF24 Analyzer (Seahorse Bioscience, North Billerica, MA, USA). Briefly, a seeding density of 1.5×104 cells per well in 200-500 μl growth medium on an XF24-well microplate (Seahorse Bioscience) were adhered and incubated at 37 °C, then after treatment the culture medium was replaced 1 h prior to measurement by the assay medium pre-warmed to 37°C (pH 7.4). The program of Seahorse XF24 Analyzer was set according to the manufacturer’s recommendation and the data are expressed in pmol/min/104 cells for OCR and in mpH/min/104 cells for ECAR to allow comparison between independent experiments. The OCR and ECAR reflect the metabolic activities of the cells and the numbers of cells, therefore the values were normalized to the total amount of cells in each well.
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2

Mitochondrial Respiration Analysis

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The cells were plated in an XF 24‐well microplate (Seahorse Bioscience) at a density of 20 000 cells per well and differentiated for 2 days. Oxygen consumption rate was measured in cells at 37°C using an XF24 analyser (Seahorse Bioscience) according to manufacturer's instructions; 10‐μM oligomycin (MCE, 1404‐19‐9), 40‐μM FCCP and 10‐μM rotenone (MCE, HY‐B1756)/antimycin (Sigma, A8674) were used to detect the uncoupled respiration, maximal respiration and nonmitochondrial respiration, respectively.
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3

Metabolic Profiling of Beige Adipocytes

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3T3-L1 cells were plated in an XF24-well microplate (Seahorse Bioscience) and differentiated into beige adipocytes. Oxygen consumption rate (OCR) was measured using an XF24 analyser (Seahorse Bioscience) according to the manufacturer’s instructions. 1 µM oligomycin, 1 µM FCCP and 0.5 µM rotenone/antimycin were injected to detect ATP production, maximal respiration and non-mitochondrial respiration, respectively.
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4

Extracellular Flux Analysis of NK Cells

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A XF-24 Extracellular Flux Analyzer (Seahorse Bioscience) was used for real-time analysis of the extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) of NK cells cultured under various conditions. In brief, purified NK cells were adhered to CellTaq (BD Pharmingen) coated XF 24-well microplate (Seahorse Bioscience) at 750,000 cells per well, 107 cells/ml. Sequential measurements of ECAR and OCR following addition of the inhibitors (Sigma-Aldrich) oligomycin (2 μM), rotenone (100 nM) plus antimycin (4 μM) and 2-deoxyglucose (2DG) (30 mM) allowed for the accurate calculation of oxygen consumption due to OxPhos and acidification due to glycolysis.
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5

Oxygen Consumption Rate of Browning Adipocytes

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SVFs isolated from iWAT were plated in a XF24-well microplate (Seahorse Bioscience) and incubated into brown adipocytes for 8 days, followed by oxygen consumption rate (OCR) measurement at 37°C by using XF24 analyzer (Seahorse Bioscience) in accordance with the manufacturer's instructions. 1 µM oligomycin, 2 µM carbonyl cyanide p-(trifluoromethoxy)phenylhydrazone and 1 µM rotenone/antimycin were delivered to detect the uncoupled respiration, maximal respiration and nonmitochondrial respiration, respectively. The final OCR in each well was corrected by its protein concentration, which was detected after finish OCR measurement.
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6

Assessing NK Cell Respiratory Capacity

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Isolated NK cells were cultured for 7–10 days in the presence of 1,000 units/ml recombinant human IL-2 and treated with or without 30 ng/ml IL-18 for 24 hours. XF 24-well microplates (Seahorse Bioscience) were precoated with Cell-Tak (Corning) for 2 hours before seeding the NK cells on the plate for real-time analysis of the Oxygen consumption rate (OCR). 106 NK cells were cultured per well, and various inhibitors were added (Agilent Seahorse XF Cell Mito Stress Test) at the following concentrations: oligomycin (2 μm), FCCP (0.5 μm), and rotenone (100 nM) plus antimycin A (4 μM), which allow the accurate calculation of respiration capacity (OCR).
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7

Mitochondrial Function Evaluation in C2C12 Myoblasts

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C2C12 myoblasts were seeded in XF 24-well microplates (Seahorse Bioscience, Billerica, USA) and differentiated. Mitochondrial inhibitors, including 1 μmol/L oligomycin, 1 μmol/L carbonyl cyanide 4-(trifluoromethoxy) phenylhydrazone (FCCP), and 1 μmol/L rotenone/antimycin A, were incubated with these cells respectively. The cell OCR was measured by the extracellular flux analysis (Seahorse Biosciences) every 8 min.
Basal respiration represents the baseline oxygen consumption reading prior to the addition of inhibitors, antimycin A Rotenone, with the subtraction of non-mitochondrial respiration. Maximal respiration is shown as the maximum OCR measurement value following FCCP injection and with the subtraction of non-mitochondrial respiration. ATP production respiration represents the OCR reduction after the addition of an inhibitor of ATP synthase, oligomycin. Spare respiratory capacity is calculated by maximal respiration subtracting basal respiration. After detection, cell protein content was calculated, and OCR was adjusted accordingly.
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8

Mitochondrial Stress Test in mIPA Cells

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mIPA cells were plated in Seahorse XF 24-well microplates and fully differentiated for 6 days. After incubation with 10 µg/mL of EEs for 6 h, mitochondrial stress test was performed by treating cells with 2 µM of oligomycin, 1 µM of FCCP, and 1 µM of rotenone/antimycin A, sequentially followed by measurement of energy metabolism of live cells using an XF24 Analyzer (Agilent, Santa Clara, CA, USA), according to the manufacturer’s instructions.
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9

Mitochondrial Respiration in Podocytes

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Podocytes were plated in collagen I coated XF24-well microplates (Seahorse Bioscience, North Billerica, MA). OCR was analyzed with the Seahorse Bioscience XF24 Extracellular Flux Analyzer over time by collecting three measurements of baseline rates and two measurements after either 1 μM oligomycin (sigma) injection, 1 μM FCCP (carbonyl cyanide 4-(trifluoromethoxy) phenylhydrazone) (Sigma-Aldrich St. Louis, MO) injection, or 0.5 μM rotenone (Sigma-Aldrich St. Louis, MO) injection. Results are shown as baseline respiration is shown because representative of the overall behavior of the samples.
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10

Mitochondrial Metabolism Analysis in PD-MSCs

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To further analyze mitochondrial metabolic functions in live PD-MSCsPRL-1, an XF24 Extracellular Flux Analyzer (Seahorse Bioscience, North Billerica, MA, USA) was used for real-time analysis of the oxygen consumption rate (OCR) and extracellular acidification rate (ECAR). Naïve and PD-MSCsPRL-1 were plated on XF24-well microplates (Seahorse Bioscience) (7 × 103 cells/well). The cells were adjusted for equilibrium in XF buffer for 60 min for contemporaneous analysis of OCR and ECAR by repeated cycles of mixing (3 min), incubation (2 min), and measurement (3 min) periods in a non-CO2 incubator. Following basal respiration measurements, the cells were sequentially treated with 0.5 μM oligomycin, 0.5 μM carbonyl cyanide-p-trifluoromethoxyphenylhydrazone (FCCP), and 1 μM rotenone/antimycin A (AA) mixture. The changes in respiration were recorded. The Seahorse XF24 Analyzer program was set according to the manufacturer’s recommendation. OCR/ECAR was then normalized by total cell number.
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