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Stereotax

Manufactured by Kopf Instruments

The Stereotax is a precision instrument designed for the accurate positioning and immobilization of small animals, such as rodents, during neuroscientific research. It features a sturdy frame and adjustable components that allow for the precise placement of the animal's head within a defined three-dimensional coordinate system. This device is a critical tool for researchers conducting studies that require the targeted manipulation or observation of specific brain regions.

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11 protocols using stereotax

1

In Vivo Viral Injections and Tracing

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Male and female mice aged 4–6 weeks were deeply anesthetized with ketamine and xylazine, head-fixed in a stereotax (Kopf Instruments), and injected via a small craniotomy over the region of interest, as described previously (Little and Carter, 2013 (link)). Viruses, fluorescently tagged Cholera Toxin Subunit B (CTB) (Life Technologies), or fluorescent retrobeads (Lumafluor) were pressure injected using a Nanoject II (Drummond) and left for 1–3 weeks prior to recording or perfusion for anatomy. All experimental procedures were approved by the University Animal Welfare Committee of New York University.
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2

In Vivo Viral Injections and Tracing

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Male and female mice aged 4–6 weeks were deeply anesthetized with ketamine and xylazine, head-fixed in a stereotax (Kopf Instruments), and injected via a small craniotomy over the region of interest, as described previously (Little and Carter, 2013 (link)). Viruses, fluorescently tagged Cholera Toxin Subunit B (CTB) (Life Technologies), or fluorescent retrobeads (Lumafluor) were pressure injected using a Nanoject II (Drummond) and left for 1–3 weeks prior to recording or perfusion for anatomy. All experimental procedures were approved by the University Animal Welfare Committee of New York University.
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3

Viral Delivery into Mouse Brain

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Mice were anesthetized with isoflurane and then transferred to the stereotax (Kopf Instruments, Tujunga, CA) and kept under 3% isoflurane anesthesia. Mice were injected with 10 mg/kg ketoprofen (AlliVet) as an analgesic. The hair over the incision site was shaved and the skin was prepped with alcohol and iodine. A midline sagittal incision was made to expose the skull; a hole was drilled above the target brain region, and a virus was delivered using a motorized digital software (NeuroStar, Stoelting CO., Wood Dale, IL), a 10-μL microinjection syringe (Hamilton CO., Reno, NV), and a micropump controller (World Precision Instruments, Sarasota, FL) at 0.1 μL per minute. A local, topical anesthetic, benzocaine (Medline Industries, Brentwood, TN) was applied to the incision area. After surgery, postoperative treatment with ketoprofen was administered for at least 48 h.
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4

Stereotaxic Viral Infusion in Mice

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Mice were initially anesthetized with 5% isoflurane and then transferred to the stereotax (Kopf Instruments, Tujunga, CA) and kept under 2% isoflurane anesthesia. The hair over the incision cite was trimmed and the skin was prepped with alcohol and iodine scrub. The skull was exposed via a midline sagittal incision and treated with the local anesthetic, benzocaine (Medline Industries, Brentwood, TN). For all surgeries, we used a motorized digital software (NeuroStar; Stoelting Co., Wood Dale, IL) to guide a 10μL microinjection syringe (Hamilton Co., Reno, NV) driven by a Micropump Controller (World Precision Instruments, Sarasota, FL). Virus was delivered bilaterally into the plPFC (AP:+2.42, ML:±0.35, DV: 2.09), BLA (AP: −1.25, ML: ±3.30, DV: 5.10), or MDT: (AP:−1.1, ML.: ±0.59, DV: 3.4). Following completion of each surgery, 10mg/kg ketoprofen (AlliVet, St. Hialeah, FL) was administered as an analgesic, and post-operative treatment with ketoprofen was administered 24 and 48 hours after the surgery.
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5

Rodent NAcore Neural Activity Recording

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Rats were anesthetized with 30% urethane at 5 ml/kg and placed in a stereotax (David Kopf Instruments) on a heating pad (37°C). Rats underwent a craniotomy above the NAc and were implanted with MEAs into either the left or right NAcore (AP, +1.8 mm; ML, ±1.5 mm; DV, −7mm versus bregma). Mouse procedures were performed as described above – with the following exceptions. Mice were anesthetized with 15% urethane at 5ml/kg and coordinates used for placement were AP, +1.1 mm; ML, ±1.2 mm; DV, −4.2mm versus bregma.
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6

Optogenetic Targeting of Striatal Circuits

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Mice (4–8 weeks) were anesthetized with isoflurane and placed in the stereotax (Kopf Instruments). Adeno-associated viral (AAV) vectors were bilaterally injected into NAc (250 nLfrom bregma: AP, +1.2; ML, ±1.0; DV, —4.6 mm), and dorsal raphe (500 nL: AP, —4.2; ML, ±0.5; DV, —3.2 mm) using a Nanoject II (Drummond Scientific). Vectors with Cre-dependent ChR2 expression (rAAV5- EF1a-DIO-hChR2(H134R)-EYFP; 4.5 × 1012, UNC) were used to target iMSN with Adora2a-Cre mice, dMSN with Drd1-Cre mice, or dorsal raphe neurons with SERT-Cre mice. Additionally, constitutive AAV vector (rAAV5-CaMKII-hChR2(H134R)-EYFP; 8.5 × 1012, Penn Vector Core) were used to express ChR2 in neurons of the NAcfor5-HT1BKOand littermate WT mice.ChR2expres- sion at the injection sites was confirmed before experiments. When ChR2 expressed outside of the target, animals were excluded from the study.
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7

Optogenetic Targeting of Striatal Circuits

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Mice (4–8 weeks) were anesthetized with isoflurane and placed in the stereotax (Kopf Instruments). Adeno-associated viral (AAV) vectors were bilaterally injected into NAc (250 nLfrom bregma: AP, +1.2; ML, ±1.0; DV, —4.6 mm), and dorsal raphe (500 nL: AP, —4.2; ML, ±0.5; DV, —3.2 mm) using a Nanoject II (Drummond Scientific). Vectors with Cre-dependent ChR2 expression (rAAV5- EF1a-DIO-hChR2(H134R)-EYFP; 4.5 × 1012, UNC) were used to target iMSN with Adora2a-Cre mice, dMSN with Drd1-Cre mice, or dorsal raphe neurons with SERT-Cre mice. Additionally, constitutive AAV vector (rAAV5-CaMKII-hChR2(H134R)-EYFP; 8.5 × 1012, Penn Vector Core) were used to express ChR2 in neurons of the NAcfor5-HT1BKOand littermate WT mice.ChR2expres- sion at the injection sites was confirmed before experiments. When ChR2 expressed outside of the target, animals were excluded from the study.
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8

Optogenetic Manipulation of Cholinergic Neurons

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Expression of mCherry and ChR2 into cholinergic neurons solely in the MS/DBB was achieved by stereotaxic injection of virus directly into the MS/DBB of ChAT-cre mice. pAAV-EF1a-double floxed-hChR2(H134R)-mCherry-WPRE-HGHpA (Addgene plasmid #20297 from Karl Deisseroth) and was packaged with AAV stereotype 9 by the viral core facility at the NIEHS. For stereotaxic injections, 5–7 week old ChAT-cre mice were anesthetized with an intraperitoneal (IP) injection of 100 mg/kg ketamine and 7 mg/kg xylazine. Once fully anesthetized, Marcaine (50–75 ul of 0.5% solution of bupivacaine) was delivered subcutaneously to the scalp as a local analgesic. Mice were secured in a stereotax (Kopf Instruments) using ear bars. A Hamilton syringe with a 30 gauge needle (Hamilton Co.) was slowly lowered into position and 1 μl of virus was infused at a rate of 0.1 μl/min for 10 min. stereotaxic coordinates used were 0.05 mm ML, 0.8 mm AP, and −4.4 mm DV. Following surgery, the mouse was given 0.1 cc/10 g body weight of buprenorphine subcutaneously (SC), 0.5 cc of sterile saline SC, and 0.1 cc of Antisedan IP to reverse the effects of the ketamine/xylazine. The mouse was allowed to recover on a heating pad and monitored for any signs of distress. 2–3 weeks following surgery, mice were decapitated under isoflurane anesthesia and their brains were used for electrophysiology as described above.
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9

Stereotaxic Viral Delivery in Mouse Brain

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Mice were anesthetized with isoflurane and then transferred to the stereotax (Kopf Instruments, Tujunga, CA) and kept under 3% isoflurane anesthesia. Mice were injected with 10 mg/kg ketoprofen (AlliVet, St. Hialeah, FL) as an analgesic. The hair over the incision site was shaved and the skin was prepped with alcohol and iodine. A midline sagittal incision was made to expose the skull; a hole was drilled bilaterally above the vHPC (AP, −3.6; ML, ±3.0; DV, −4.0) or BLA (AP: −1.25, ML: ±3.30, DV: −5.00) and virus was delivered using a motorized digital software (NeuroStar, Stoelting CO., Wood Dale, IL), a 10μL microinjection syringe (Hamilton CO., Reno, NV), and a Micropump Controller (World Precision Instruments, Sarasota, FL) at 0.1μL per minute. A local, topical anesthetic, benzocaine (Medline Industries, Brentwood, TN) was applied to the incision area. After surgery, post-operative treatment with ketoprofen was administered for at least 48 h, up to 72 h.
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10

Targeted Viral Transduction in Mouse Visual Cortex

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Burrhole injections of viral constructs [rAAV2/1&2.hSyn.SIO-eOPN3-mScarlet (Addgene 125713 diluted to 6 × 1012 viral genomes/mL) or AAV1.CAG.Flex.tdTomato.WPRE.bGH (Addgene 51503; diluted to 3 × 1012 viral genomes/mL)] were used to selectively express opsins and control fluorophores in layer 4. Mice were anesthetized with isoflurane and positioned in a stereotax (Kopf Instruments). Meloxicam (5 mg/kg) was administered subcutaneously and bupivacaine (5 mg/kg) was administered locally prior to incision. After the skull was exposed, a small hole was drilled −2.6 mm lateral from lambda and directly anterior to the lambdoid suture targeting the posterior and medial aspect of the primary visual cortex (V1). Injection micropipettes were pulled from glass capillary tubes (1B100F-4, World Precision Instruments) and backfilled with virus and then mineral oil and mounted on a Hamilton syringe. The pipette was lowered into the brain and pressure injected at two depths using an UltraMicroPump (World Precisions Instruments; 2 × 100 nL; −350 μm and −450 μm from the surface). We waited between 4.5–7 weeks for viral expression for both in vitro and in vivo electrophysiology and confirmed expression post hoc.
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