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3 protocols using sc 8354

1

Comprehensive Antibody Characterization for Alzheimer's Research

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Reagents were purchased from Sigma-Aldrich unless specified otherwise. Antibodies used in this study were as follow: anti-APP 6E10 (SIG-39320, Covance), anti-Aβ42 12F4 (SIG-39142, Covance), mouse anti-Tau Tau12 (SIG-39416, Covance), mouse anti-Tau HT7 (MN1000, Thermo Scientific Pierce), mouse anti-phosphorylated Tau AT8 (MN1020, Thermo Scientific Pierce), rabbit anti-Tau H150 (SC-5587, Santa Cruz Biotechnology), rabbit anti-Tau (A0024, Dako), rabbit anti-clusterin H330 (SC-8354, Santa Cruz Biotechnology), goat anti-clusterin M18 (SC-6420, Santa Cruz Biotechnology), goat anti-clusterin C18 (SC-6419, Santa Cruz Biotechnology), mouse anti-BIN1 99D (05-449, Millipore), rabbit anti-Gapdh (G9545), rabbit anti-actin (A2066), and mouse anti-Flag (F1804), mouse anti-myc 9E10 (SC-40, Santa Cruz Biotechnology), mouse and goat IgG control (SC-2015 and SC-2028, Santa Cruz Biotechnology), donkey anti-mouse IgG (H+L) IRDye 800 (926-32212, LI-COR Biosciences), donkey anti-rabbit IgG (H+L) IRDye 680 (926-68073, LI-COR Biosciences), donkey anti-rabbit IgG (H+L) IRDye 800 (926-32213, LI-COR Biosciences), and donkey anti-goat IgG (H+L) IRDye 680 (926-68074, LI-COR Biosciences).
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2

Immunoblotting Analysis of Neural Markers

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The proteins were prepared by suspending the cells in lysis buffer with complete ethylenediaminetetraacetic acid (EDTA)-free protease-inhibitor-cocktail tablets (Roche, Basel, Switzerland) for 10 min on ice. The cell extracts were sonicated (3x10 sec), then centrifuged at 15,000 × g for 15 min to remove the insoluble materials.
Each protein sample was electrophoresed by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and then transferred onto nitrocellulose membranes (Millipore, Bedford, MA, USA). After blocking with 5% fat-free milk powder at room temperature for 2 h, the membranes were incubated with primary antibodies against CLU (sc-8354), Nestin (sc-33677), Musashi RNA-binding protein 1 (Msi-1; sc-135721), MAP-2 (sc-74421), GFAP (sc-33673), MBP (sc-13564) and β-actin (sc-8432; Santa Cruz Biotechnology, Inc.) at 4°C overnight, and subsequently cultured with HRP-conjugated goat anti-mouse IgG (sc-2489; Santa Cruz Biotechnology, Inc.) for 2 h at room temperature. β-actin was used as an internal control. The reaction product was visualized by enhanced chemiluminescence (ECL; Amersham Pharmacia, Piscataway, NJ, USA).
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3

Western Blot Analysis of Clusterin and Actin

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Proteins were extracted from the cell layer and 5–20 µg of total protein subjected to non-reducing SDS-PAGE using 12.5% resolving/ 4.8% stacking polyacrylamide gels. Electrophoresed proteins were electroblotted onto polyvinyldene difluoride (PVDF) membrane and immunodetection was carried out in Tris-buffered saline Tween-20 pH 7.6 (10 nM Tris, 150 nM NaCl/0.1% v/v Tween 20) with 5% w/v non-fat milk. Polyclonal rabbit or mouse-monoclonal anti-human clusterin (0.4 µg/ml, sc-8354 (discontinued) or sc-5289, Santa Cruz) or mouse monoclonal anti-human α-smooth muscle actin (7.1 ng/ml, M0851, Dako, Denmark) and goat polyclonal anti-human vinculin (0.4 µg/ml, sc-7649, Santa Cruz) antibodies were incubated overnight at RT. Secondary antibodies conjugated to horseradish peroxidase (HRP) (goat anti-rabbit, 50 ng/ml; rabbit anti-mouse, 260 ng/ml; rabbit anti-goat, 110 ng/ml, Dako, Denmark) were applied for 1.5 hours at RT. Signal detection via chemiluminescence (Luminata Crescendo Western HRP substrate, Millipore) was captured via ImageQuantTM and acquisition tool ImageQuant TL 1D v.8.1 analysis software (GE healthcare, UK). Settings: Exposure type – “Precision”, exposure time −10 seconds, high sensitivity/ resolution. Protein sizes were analyzed via PageRuler Pre-stained Protein Ladder (Thermo Fisher Scientific, UK).
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