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Sepasol rna 1 super solution

Manufactured by Nacalai Tesque
Sourced in Japan

Sepasol RNA I Super solution is a reagent used for the extraction and purification of RNA from various biological samples. It is designed to isolate high-quality RNA efficiently and effectively.

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2 protocols using sepasol rna 1 super solution

1

Quantifying Hexokinase 1 Expression in Retinas

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RNA levels in the retinas were evaluated using PCR. Briefly, mouse retinas were harvested, frozen in liquid nitrogen, and stored at −80 °C. RNA from the homogenized retinas was isolated using ice-cold Sepasol RNA I Super solution (Nacalai Tesque, Japan) and chloroform, followed by ethanol precipitation. The purified mRNA was applied to reverse transcription using SuperScript II (Life Technologies, Gaithersburg, MD) in order to obtain cDNA. Human retinal cDNA was purchased from ScienCell Research Laboratories (Carlsbad, CA). Human and mouse cDNA was amplified using Taq polymerase (Ex Taq; TaKaRa Bio, Otsu, Japan) as follows: 95 °C for 20 seconds, 56 °C for 20 seconds, and 72 °C for 30 seconds, for 35 cycles. Forward and revere primers (5′-GTTGGTGTCGACGGATCTCT-3′ and 5′-CGCATCCTCTTCTTCACCTC-3′, respectively) were used to determine the mRNA expression of human hexokinase 1 (accession number: NM_000188) in the retinas. Similarly, mouse cDNA was applied to PCR using forward and reverse primers (5′-AGTGGAAGCCAGCTTTTTGA-3′ and 5′-TTCAGCAGCTTGACCACATC-3′, respectively) for murine hexokinase 1 (accession number: NM_001146100.1). PCR products were subjected to 1% agarose gel electrophoresis with ethidium bromide staining (Nacalai Tesque).
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2

Transcriptional Profiling of Cholinergic Pathways

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The expression profiles of the genes related to ACh metabolism and signaling transduction pathways were analyzed using the Illumina iScan system with MouseRef-8 Expression BeadChips (Illumina, San Diego, CA, USA) that contain probes that detect over 24 000 transcripts. Total RNAs were isolated by Sepasol-RNA I super solution (Nacalai Tesque, Kyoto, Japan) from the striatum and globus pallidus in wild-type and DD mice. We used the area that includes the neostriatum, ventral striatum, and globus pallidus but not thalamus or hypothalamus in the present study. Total RNA (50 ng) was then applied to RNA amplification that was performed with the TargetAmp Nano-g Biotin-aRNA Labeling Kit (EPICENTRE Biotechnologies, Madison, WI, USA) according to the instructions of the manufacturer. Briefly, first-strand cDNA was synthesized with T7-oligo (dT) primer from total RNAs, and second-strand cDNA synthesis was then performed with synthesized first-strand cDNA. The in vitro transcription reaction was performed with the product of second-strand cDNA synthesis as the template for producing biotin-cRNAs by incorporating biotin-UTP into the RNA transcripts. Finally, 750 ng of biotin-cRNA was hybridized to the MouseRef-8 Expression BeadChips and then reacted with streptavidin-Cy3. The expression intensity of the transcripts on the BeadChips was detected with an Illumina iScan reader.
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