The largest database of trusted experimental protocols

3 protocols using qrt pcr

1

Quantifying Gene Expression in Brain Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
The tissue samples used here were the same as those obtained for the WB studies described above. Total RNA was extracted from brain tissue and reverse-transcribed into complementary DNA. Next, relative mRNA expression of genes was normalized to that of beta-tubulin, and the fold change was evaluated using the 2−ΔΔCT method. The primer sequences used for quantitative Real-Time PCR (qRT-PCR) were obtained from RiboBio (Guangzhou, China) and were as follows: CLCF1 forward 5′-CTTAGCTGGGACCTACCTGAA-3′, reverse 5′-CCACACTTCCAAGTTGACCGT-3′; and Tubulin beta forward 5′-GGCCAAGGGTCACTACACG-3′, reverse 5′-GCAGTCGCAGTTTTCACACTC-3′.
+ Open protocol
+ Expand
2

Cardiac Gene Expression Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted from cardiac tissues or cardiomyocytes. The Trizol RNAiso Plus kit (TaKaRa, 9109) was used for RNA extraction, and the RevertAid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific, K1622) was used for reverse transcription (RT). The quantitative PCR was then performed using the following primers (5′-3′): rno-ANP-F: GAGCAAATCCCGTATACAGTGC; rno-ANP-R: ATCTTCTACCGGCATCTTCTCC; rno-BNP-F: CTGCTTGCGGAGGCGAGAC; rno-BNP-R: TGTTCTGGAGACTGGCTAGGACTTC; hsa-CDK10-F: GCCTGCGTCATCCGAACAT; hsa-CDK10-R: AGGGTGTTGGCATATTCTCCA; hsa-EFNA3-F: CATGCGGTGTACTGGAACAG; hsa-EFNA3-R: AGATAGTCGTTCACGTTCACCT. The miR-210 expression in heart tissues or cardiomyocytes was determined by qRT-PCR (RiboBio, Guangzhou, China). 18S or 5S was used for internal control as appropriate. For analysis of circulating miR-210 levels, total RNA was extracted from serum samples using MirVana miRNA isolation kit (Thermo Fisher Scientific, AM1561). Caenorhabditis elegans miR-39 (cel-miR-39) was spiked in to normalize the blood volume. The primers for miRNA detection in the blood sample by PCR were obtained from RiboBio (Guangzhou, China).
+ Open protocol
+ Expand
3

Quantifying miRNA Expression in Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA from RAW264.7 and THP-1 cells were extracted with TRIzol reagent (Invitrogen, USA). Total miRNA was extracted from tissues and cells and quantified using the miRNeasy Serum/Plasma Kit (QIAGEN, Germany). cDNA was synthesized from the total RNA (1000 ng) using RevertAid first-strand cDNA (Fermentas; Thermo Fisher Scientific, Inc.) or a TaqMan microRNA reverse transcription kit (Applied Biosystems; Thermo Fisher Scientific, Inc.). All reactions were performed in triplicate using a SYBR Green PCR kit (Qiagen, USA) according to the manufacturer's instructions. The primer sequences used for qRT-PCR (RiboBio) are listed in Table 1. All statistical analyses were normalized to the internal controls U6, GAPDH, andβ-actin.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!