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526 protocols using cobas e601

1

Cardiac Biomarkers Measurement in Plasma

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High-sensitivity troponin T (hs-cTnT), high-sensitivity troponin I (hs-cTnI), and NT-proBNP were measured in a laboratory at the University of Maryland School of Medicine. We selected only the samples which had not undergone a prior freeze-thaw cycle (excluded N=19 samples).
Hs-cTnT was measured using a Roche Cobas e601 (Elecsys reagents), which has a lower limit of detection (LLOD) of 3 ng/L. hs-cTnIAbbott was measured using an Abbott ARCHITECT i2000SR and had a LLOD of 1.7 ng/L. hs-cTnIOrtho was measured using an Ortho Vitros 36000 and had a LLOD of 0.39 ng/L. hs-cTnISiemens was measured using a Siemens Centaur XP and had a lower limit of detection of 1.6 ng/L. NT-proBNP was measured using a Roche Cobas e601 autoanalyzer (LLOD 5 pg/ml, upper LOD 35,000 pg/ml). Details including coefficients of variability for each assay are publicly available at https://wwwn.cdc.gov/Nchs/Nhanes/1999-2000/SSTROP_A.htm.
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2

Quantitative Plasma Biomarker Analysis

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The plasma CEA and CA724 contents were assessed quantitatively using the electro–chemiluminescence assay (ECLIA) on the Roche Cobas e601 fully automated immunoassay platform (Roche Diagnostics GmbH, Germany). The CRP and fibrinogen contents were determined using Cobas e601 (Roche, Mannheim, Germany) and CA7000 analyzer (Sysmex Corporation, Kobe, Japan), respectively. The original twolevel quality control (QC) products, including PC TM1 and PC TM2, PC U1 and PC U2, and PC V1 and PC V2, were run alongside patient samples. The daily QC results were analyzed in accordance with the Westgard Sigma rules. The common QC rules were as follows: 12s, 13s, 22s, R4s, 41s, and 10X. Patients' clinical parameters, including age, gender, pathology diagnosis, and the laboratory test results were retrieved from the medical records system.
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3

HBV Viral Load Quantification

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HBeAg and HBsAg levels were determined using a Roche Cobas e601 analyzer (Roche Diagnostics Ltd., Burgess Hill, UK) and expressed according to a cutoff index. HBsAg quantification was performed using Roche Cobas e601 (Roche Diagnostics) with a 0.05–250 IU/mL linear detection range for HBsAg. Real-time fluorescent quantitative PCR was used to quantify serum HBV DNA, and the method has a lower limit of quantitation (LLOQ) of 20 IU/mL.
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4

Hormone Measurement Assays Protocol

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Up to March 2008 LH, FSH, estradiol and TSH levels were measured by chemilu-minescence immunoassay (Siemens Bayer Advia Centaur CP Immunoassay). Since March 2008 LH, FSH, estradiol and TSH were measured by electrochemiluminescence immunoassay (Roche Cobas E 601, module immunology analyzer). SHBG levels were measured by chemiluminescence immunoassay (Siemens Bayer Advia Centaur CP Immunoassay) up to November 2010 and since then by electrochemiluminescence immunoassay (Roche Cobas E 601, module immunology analyzer). Serum levels of Inhibin B were measured by the Beckman Coulter GenII assay.
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5

Quantitative Antibody Response to BNT162b2 Vaccine

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Blood serum was collected 2–3 weeks after administration of the second BNT162b2 vaccine dose. Serum samples were analyzed by using Elecsys® Anti-SARS-CoV-2S assay on the cobas e 601 (Roche Diagnostics) for the quantitative detection of antibodies, predominantly IgG, aimed at the SARS-CoV-2 spike protein receptor binding domain. This assay has a measurement range of 0.40–250 U/mL, with measured antibody concentration of < 0.80 U/mL considered as negative and ≥ 0.80 U/mL as positive. When sample results exceeded the upper limit of the measuring range, antibody concentration was quantitated by on-board dilution. For the purpose of the current study, antibody concentration ≥ 0.80 U/mL but < 250 U/mL was graded as low titer and antibody concentration ≥ 250 U/mL was graded as high titer. To ensure that none of the patients had been recently exposed to SARS-CoV-2, an added test was run for the presence of antibodies to SARS-CoV-2 nucleocapsid by the Elecsys® Anti-SARS-CoV-2 assay using the cobas e 601 (Roche Diagnostics).
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6

Comprehensive Metabolic Profiling in Fasting Participants

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Fasting blood samples were collected from the antecubital vein for fasting plasma glucose, insulin, glycosylated hemoglobin (HbA1c), triglycerides (TG), total cholesterol (TC), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), urea nitrogen, creatinine, and uric acid measurements. The fasting plasma glucose levels were assessed by the hexokinase method using TBA-200FR analyzer (Toshiba Medical Systems, Tokyo, Japan). Insulin concentration was evaluated by a chemiluminescence immunoassay (Cobas e601; Roche, Basel, Switzerland). HbA1c was quantitated by high-performance liquid chromatography (Bio-Rad Laboratories, Inc., Hercules, CA, USA). TG, TC, HDL-C, and LDL-C concentrations were assessed by specific immunoassays (Cobas e601; Roche, Basel, Switzerland). Serum free fatty acids (FFAs) were detected via an enzymatic method (DiaSys Diagnostic Systems GmbH, Holzheim, Germany). Homeostasis model assessment of insulin resistance (HOMA-IR) was derived as follows: [fasting serum insulin (mU/l) × fasting plasma glucose (mmol/l)]/22.5 [15 (link)]. Serum 1.5-anhydroglucitol (1.5-AG) was measured using an enzymatic assay kit (GlycoMark, Japan).
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7

Assessing Biotin Interference Mitigation

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To assess the anti-biotin interference ability in the sandwich method, we used high-value mixed sera, and for the competitive method, we used low-value mixed sera. These mixed sera, together with 10% biotin solution at concentrations of 0 to 200,000 ng/mL, were labeled from H0 to H17 for the sandwich method and L0 to L17 for the competitive method and were used as the samples in our experiment. The previously prepared M reagents (labeled from M1 to M6) were used as reagents and used for tests with the Cobas e 601 (Roche Diagnostics). The level of and change in optical signal were observed, and a change in the amplitude of the optical signal of ±10% was considered to indicate an improved ability to resist biotin interference.
To assess the impact of the concentration of M on the optical signal level, R1 and R2 reagents were replaced with Roche’s special diluent, a luminescent substance was used as a sample, and M1–M6 were used as M reagents. The Cobas e 601 (Roche Diagnostics) was used to observe the change in light signal.
We also assessed the light transmittance of M1–M6 at a 620-nm wavelength using a 721G spectrophotometer (Shanghai YITIAN Precision Instrument Co. Ltd., Shanghai, China) and adjusted the light transmittance to 100% with the Roche diluent.
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8

Comprehensive Serum Lipid and Glucose Profile Analysis

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Fasting blood samples were also collected for HbA1c, triglycerides, total cholesterol, high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), and free fatty acid (FFA) measurements. Plasma glucose amounts were assessed by the hexokinase method on TBA-200FR (Tokyo, Japan). Insulin concentration was evaluated by a chemiluminescence immunoassay (Cobas e601, Roche). HbA1c was quantitated by high-performance liquid chromatography (Bio-Rad D-10). Triglyceride, total cholesterol, HDL-C, and LDL-C concentrations were assessed by specific immunoassays (Cobas e601, Roche). Serum FFAs were detected via an enzymatic method (DiaSys Diagnostic Systems, Co., Ltd). HOMA-IR was derived as follows: [fasting serum insulin (mU/l) × fasting glucose (mmol/l)]/22.531 (link). The Adipo-IR was defined as fasting insulin concentration (mIU/ml) × fasting FFA (mmol/l)32 (link),33 (link).
Mouse serum was analyzed for FFA using a standard enzymatic assay following the manufacturer’s protocols (ColorfulGene biological technology Co., Ltd, Wuhan, China).
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9

Thyroglobulin Measurement in FNA Specimens

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The FNA wash-out specimens were stored at −20 °C and transferred to the clinical laboratory within 1 month for the analysis of Tg. Serum Tg was only measured in patients on the advice of their physicians. The Tg concentrations in both the serum and FNA wash-out were measured with an automated electrochemiluminescence immunoassay (Cobas e 601, Roche Diagnostics, Mannheim, Germany). The minimum detectable Tg concentration was 0.04 ng/mL. The maximum Tg concentration detectable in our laboratory was 500 ng/mL. If the Tg level of the sample was above the maximum value (500 ng/mL), the sample was diluted and examined again. According to previous reports, the cutoff value was far lower than the maximum value [5 (link)–14 (link)]. Therefore, we decided to perform no further examination of the samples with maximum values, and recorded these values as 500+ ng/mL. Serum TgAb was also measured with an automated electrochemiluminescence immunoassay (Cobas e 601, Roche Diagnostics, Mannheim, Germany) with a functional sensitivity of 10 IU/mL.
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10

Serum Biomarkers Assessment Protocol

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Blood sample were harvested in the morning after at least 8 hours fasting. Serum was gathered after centrifugation at 3,000 r/min for 10 minutes. Serum ucOC were assayed by ELISA (MK118, Takara Bio Inc, Japan), with the intra assay coe cient of variation of 4.58%-6.66% and the inter assay coe cient of variation of 5.67%-9.87%. Serum cOC were measured by ELISA (MK111, Takara Bio Inc, Japan), with the intra assay coe cient of variation of 3.3%-4.8%, the inter assay coe cient of variation of 0.7%-2.4%.
Serum calcium (Ca), phosphorus (Pi), and alkaline phosphatase (ALP) measurements were performed by a Beckman Automatic Biochemical Analyzer (AU5800, Beckman Coulter, Indianapolis, IN, USA). Serum OC, β-isomer of C-terminal telopeptides of type I collagen (β-CTX), N-terminal prepeptide of type 1 procollagen (P1NP) were measured by electrochemiluminescence immunoassay (Roche Cobas e601, Mannheim, Germany). Parathyroid hormone (PTH) was measured using chemiluminescence (Siemens ADVIA Centaur, Munich, Germany). 25hydroxyvitamin D (25OHD) was measured by electrochemiluminescence immunoassay (Roche Cobas e601, Mannheim, Germany). Creatinine (Cr) was measured by an automated Roche electrochemiluminescence system (E170; Roche Diagnostics, Basel, Switzerland). All measurements were completed by central laboratory of PUMCH.
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