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Dapi staining solution

Manufactured by Beyotime
Sourced in China, United States, Japan

DAPI (4',6-diamidino-2-phenylindole) is a fluorescent dye that binds to the minor groove of DNA. It is commonly used in fluorescence microscopy for nuclear staining and DNA quantification. The DAPI staining solution provided by Beyotime is a ready-to-use reagent for this application.

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138 protocols using dapi staining solution

1

BrdU Incorporation Assay for Cell Proliferation

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Cells (1 × 105/mL) were inoculated into a 35 mm diameter culture plate (with a cover slip placed inside), cultured for 1 d, then 1.0 mg/mL of BrdU solution (Applied Biosystems, Foster City, CA, USA) was added, and the cells were incubated at 37 °C for 4 h, and then the culture solution was discarded. The slip was rinsed with PBS for 3 times and the cells were fixed with methanol for 10 min. After the slide was dried, endogenous oxides were inactivated, the unspecific antigens were blocked with 5% rabbit serum. After DNA was denatured, the cells were rinsed with PBS and the primary antibody was added. Moreover, the cells were incubated with secondary antibodies for 1 h. Subsequently, the cells were stained with DAPI staining solution (Beyotime, Shanghai, China). BrdU positive cells in the 3 fields of view were randomly counted under the microscope, and the average value was taken.
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2

Exosome Labeling and Uptake Assay

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Exo was labeled with the membrane labeling dye PKH67 green fluorescence (HR8569, BjBalb, Beijing, China). Exo secreted by control cells was labeled using PKH67 dye, and the labeled Exo was co-cultured with EcESCs for 24 h, after which the cells were fixed with 4% paraformaldehyde and the nuclei were stained with 10 μg/mL of DAPI staining solution (C1025, Beyotime) for 10 min. The uptake of labelled Exo by recipient cells was observed using a Nikon Eclipse fluorescence microscope (Nikon, Tokyo, Japan).
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3

Immunofluorescence Staining of Ear Tissue

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The right ear tissue sections and the HUVECs climbing slices were incubated with primary antibodies overnight at 4 °C. And then rinsed with secondary antibodies (Table S1) for 30 min at room temperature and sealed with DAPI staining solution (Beyotime Bio, China). The sections were observed under a fluorescence microscope (IX73, Olympus, Japan) or confocal microscope (FluoView FV3000, Olympus, Japan).
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4

Immunofluorescence Imaging of Mouse Testes

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For immunofluorescence, 6 μm-thick cryosections of mouse testes were fixed with 4% PFA/PBS at room temperature for 10 min. After permeabilizing with 0.25% Triton X-100/PBS at room temperature for 10 min, the sections were washed by PBS for three 5 min. The sections were blocked in the blocking solution (0.05% Tween-20 and 0.5 g/ml BSA in PBS) at room temperature for 1 h. The sections were incubated with the primary antibodies (diluted by 1% BSA/PBS) at 4 °C overnight. After washing with PBS for three 5 min, the sections were incubated with the secondary antibodies (diluted by 1% BSA/PBS) at room temperature for 2 h in the dark. The sections were washed by PBS for three 5 min and stained by DAPI staining solution (Beyotime, Cat. C1006). The anti-fade mounting medium (Beyotime, Cat. P0126) was used for mounting. The images were captured using a Nikon Ti-S microscope (Nikon Ti-S2) equipped with a Plan Apochromat 20×/0.40 objective (Nikon) and a NA 40×/0.75 objective (Nikon).
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5

Immunofluorescence Analysis of Pan-Lysine Succinylation in Ovarian Tissue

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After slides baking, dewaxing, rehydration, the antigen retrieval was performed. The ovarian sections were incubated with 0.1% Triton X-100 for 1 h at room temperature. After blocking with 5% BSA (SW3015, Solarbio) for 1 h, the samples were incubated with the primary antibodies overnight at 4 °C. The primary antibody was anti-pan-Ksuc (1:100, PTM401, PTMBio). The secondary antibody (fluorescein isothiocyanate conjugated goat anti-rabbit IgG, 1:100, E-AB-1014, Elabscience, Wuhan, China) was incubated with the samples for 1 h in the dark at room temperature. The cell nuclei were stained with DAPI Staining Solution (C1005, Beyotime, Shanghai, China). To confirm the validity and reliability of reagents, negative control was set (Fig. S2B). Fluorescence images were obtained using a fluorescence microscope (Olympus, Tokyo, Japan).
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6

Peptide Synthesis and Cell Assays

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The peptide (H2N-CCYXXHWKHLHNTKTFL-COOH) was synthesized using commercial solid-phase synthesis methods. Nitric acid (HNO3), Sodium hydroxide (NaOH), Hydrogen tetrachloroaurate (III) (HAuCl4·3H2O), hydrogen peroxide (H2O2) and hydrochloric acid (HCl) were purchased from Sinopharm Chemical Reagent Co., Ltd. Siha, Caski and Hela cell lines were obtained from ATCC. The RPMI 1640 cell culture medium, DMEM High Glucose and PBS were acquired from HyClone, Logan, UT, USA. FBS and trypsin-EDTA were purchased from Gibco, CA, USA. 3, 3′ 5, 5′-tetramethyl benzidine sulfate (TMB), DAB HRP Color Development Kit, DAPI staining solution, anti-rabbit IgG-HRP, Cell lysis buffer, a BCA Protein Assay Kit and other cell molecular biology reagents were purchased from the Beyotime Institute of Biotechnology, Shanghai, China. Human MT1-MMP antibody and anti-rabbit secondary antibodies were purchased from Abcam Biotechnology. Ultrapure water (18 MΩ) was used throughout the study.
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7

Immunofluorescence Assay for Gastric Cancer Cells

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Gastric cancer cells (1 × 105) were inoculated into 24‐well plates and incubated for 24 h at 37°C. The cells were then fixed for 15 min by 4% paraformaldehyde, followed by cell permeation using PBS supplemented with 0.3% Triton X‐100 for 15 min. The cells were subsequently blocked for 60 min by PBS containing 3% BSA, after which they were incubated for 1 h with cortactin primary Abs (ab81208; Abcam) at 37°C. This was followed by 1 h of incubation in the dark with the secondary Abs (ab150113; Abcam) at 37°C as well as a 1 h incubation in the dark with phalloidin (Solarbio) at room temperature. The cells were then incubated in the dark with DAPI staining solution (Beyotime) for 10 min at room temperature. Finally, they were transferred to slides prior to visualization and the capture of immunofluorescence images with an FV3000 confocal laser scanning microscope (Olympus).
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8

Immunofluorescence Staining for NAMPT

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Following various treatments and interventions, all groups of cells were washed with PBS for 5 min. The cells were then fixed with 4% paraformaldehyde for 15 min, blocked with a blocking solution containing 10% calf serum for 45 min at RT, incubated with anti-NAMPT antibody (dilution, 1:200; cat no. ab45890; Abcam, Cambridge, MA, USA) at 37°C for 1 h, and placed in a 4°C refrigerator overnight. After washing with PBS, the cells were incubated with fluorescein isothiocyanate-labelled goat anti-rabbit IgG (dilution, 1:500; cat no. A0562; Beyotime Institute of Biotechnology) for 1 h in a 37°C incubator. After 3 rinses with PBS, the cells were covered with DAPI staining solution (cat no. C1005; Beyotime Institute of Biotechnology) and incubated at RT for 5 min. The cells were rinsed 3 more times with PBS (5 min each time). Subsequently, the cells were mounted onto glass slides in PBS and glycerol (1:1). The fluorescence signal was examined using an Olympus BX51 biological microscope at a magnification of ×200.
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9

Immunofluorescence Staining Protocol

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Tissue sections were sequentially incubated in xylene and different concentrations of ethanol. Antigen retrieval was performed using microwave treatment, followed by blocking with 5% BSA at room temperature for 60 minutes. Subsequently, the sections were incubated overnight at 4°C with an appropriately diluted primary antibody. After the tissue sections were rewarmed the next day, they were incubated with an appropriately diluted secondary antibody specific to the corresponding species (Proteintech, Wuhan, China) at room temperature in the dark for 60 minutes. Finally, nuclear staining was performed using DAPI staining solution (Beyotime, Shanghai, China), and the slides were sealed with anti-fade mounting medium to prevent fluorescence quenching. Samples were analyzed using a fluorescence microscope (Nikon, Tokyo, Japan), and microscopic images were obtained.
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10

Anesthesia and Apoptosis Assessment in Rat Auditory Cortex

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The combination of ketamine and chlorpromazine can be used for anesthesia in rats (35 (link),36 (link)). In the present study, the rats (n=6/subgroup) were anesthetized with a combination of ketamine (100 mg/kg) and chlorpromazine (5 mg/kg) via intra-peritoneal injection, according to our previous studies (37 (link),38 (link)). Following deep anesthesia determined by respiratory, palpebral reflex, pedal withdrawal reflex, and cutaneous reflex (39 (link),40 (link)), the animals were transcardially perfused with 400 ml of saline followed by 4% paraformaldehyde solution (pH 7.2-7.4). Following perfusion, the brain was dissected from the skull, and the auditory cortex was separated and immersed overnight in the same fixative. The right side was prepared for TUNEL staining and the left side was prepared for immunofluorescence. The following processes were performed, as previously described (41 (link)). Apoptosis in the auditory cortex of rats was detected using a TUNEL assay (Roche Diagnostics GmbH, Mannheim, Germany) according to the manufacturer's protocol. DAPI staining solution (1 µg/ml; Beyotime Institute of Biotechnology, Haimen, China) was used to counterstain the nuclei. The labeled cells were detected with a laser scanning confocal microscope (Nikon Corporation, Tokyo, Japan).
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